<html>
<head>
<meta http-equiv="Content-Type" content="text/html; charset=us-ascii">
</head>
<body style="word-wrap:break-word; color:rgb(0,0,0); font-size:14px; font-family:Calibri,sans-serif">
<div>
<div>
<div>Marius,</div>
<div><br>
</div>
<div>GREAT CATCH. &nbsp;I'm working on incorporating your test into ITK right now in order to demonstrate both the bug and the solution.</div>
<div><br>
</div>
<div>Hans</div>
<div><br>
</div>
<div>
<div>
<div style="font-family:Consolas; font-size:medium">
<div style="font-family:Consolas,monospace; font-size:12px">=================================================================</div>
<div style="font-family:Consolas,monospace; font-size:12px">Hans J. Johnson, Ph.D.</div>
<div style="font-family:Consolas,monospace; font-size:12px">Assistant Professor, Department of Psychiatry</div>
<div style="font-family:Consolas,monospace; font-size:12px"><br>
</div>
<div style="font-family:Consolas,monospace; font-size:12px">Mailing Address:</div>
<div style="font-family:Consolas,monospace; font-size:12px">W274 GH &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; Email:&nbsp;<a href="mailto:hans-johnson@uiowa.edu">hans-johnson@uiowa.edu</a></div>
<div style="font-family:Consolas,monospace; font-size:12px">200 Hawkins Drive &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; Phone: (319) 353 8587</div>
<div style="font-family:Consolas,monospace; font-size:12px">The University of Iowa</div>
<div style="font-family:Consolas,monospace; font-size:12px">Iowa City, IA 52242</div>
</div>
</div>
</div>
</div>
</div>
<div><br>
</div>
<span id="OLK_SRC_BODY_SECTION">
<div style="font-family:Calibri; font-size:11pt; text-align:left; color:black; border-bottom:medium none; border-left:medium none; padding-bottom:0in; padding-left:0in; padding-right:0in; border-top:#b5c4df 1pt solid; border-right:medium none; padding-top:3pt">
<span style="font-weight:bold">From: </span>&quot;<a href="mailto:M.Staring@lumc.nl">M.Staring@lumc.nl</a>&quot; &lt;<a href="mailto:M.Staring@lumc.nl">M.Staring@lumc.nl</a>&gt;<br>
<span style="font-weight:bold">Date: </span>Wednesday, April 24, 2013 8:33 AM<br>
<span style="font-weight:bold">To: </span>ITK &lt;<a href="mailto:insight-developers@itk.org">insight-developers@itk.org</a>&gt;<br>
<span style="font-weight:bold">Subject: </span>[Insight-developers] Bug in BSplineInterpolateImageFunction<br>
</div>
<div><br>
</div>
<div><style>
<!--
@font-face
        {font-family:Calibri}
p.MsoNormal, li.MsoNormal, div.MsoNormal
        {margin:0cm;
        margin-bottom:.0001pt;
        font-size:11.0pt;
        font-family:"Calibri","sans-serif"}
a:link, span.MsoHyperlink
        {color:blue;
        text-decoration:underline}
a:visited, span.MsoHyperlinkFollowed
        {color:purple;
        text-decoration:underline}
p
        {margin-right:0cm;
        margin-left:0cm;
        font-size:12.0pt;
        font-family:"Times New Roman","serif"}
span.EmailStyle17
        {font-family:"Calibri","sans-serif";
        color:windowtext}
.MsoChpDefault
        {font-family:"Calibri","sans-serif"}
@page WordSection1
        {margin:70.85pt 70.85pt 70.85pt 70.85pt}
div.WordSection1
        {}
-->
</style>
<div lang="EN-US">
<div class="WordSection1">
<p class="MsoNormal">Dear all,</p>
<p class="MsoNormal">&nbsp;</p>
<p class="MsoNormal">The BSplineInterpolateImageFunction class has two functions to compute<br>
the derivative:<br>
- EvaluateDerivativeAtContinuousIndex<br>
- EvaluateValueAndDerivativeAtContinuousIndex</p>
<p class="MsoNormal">The first one does take direction cosines into account, the other does<br>
not. When called while using an image with non-trivial direction<br>
cosines, the two derivatives are not equal.</p>
<p class="MsoNormal">I believe this bug was introduced a long time ago by commit 6abbc7969a90786c4c73f5d191f634db536c2d1d :</p>
<p class="MsoNormal">&nbsp;</p>
<p class="MsoNormal"><a href="http://itk.org/gitweb?p=ITK.git;a=commitdiff;h=6abbc7969a90786c4c73f5d191f634db536c2d1d#patch13">http://itk.org/gitweb?p=ITK.git;a=commitdiff;h=6abbc7969a90786c4c73f5d191f634db536c2d1d#patch13</a></p>
<p class="MsoNormal">&nbsp;</p>
<p class="MsoNormal">I attached a test program that simply calls the two functions. The input of the test program (set with interpolator-&gt;SetInputImage() ) is an image with direction cosines:</p>
<p class="MsoNormal">(-0, 7.48376e-009, -1, 7.48376e-009, 1, 7.48376e-009, 1, -7.48376e-009, 0)</p>
<p class="MsoNormal">&nbsp;</p>
<p class="MsoNormal">Current output:</p>
<p class="MsoNormal">EvaluateDerivative:&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; [42.7697, -9.97885, 22.2913]</p>
<p class="MsoNormal">EvaluateValueAndDerivative: [-22.2913, -9.97885, 42.7697]</p>
<p class="MsoNormal">But that should really be the same. Note that the first and third entry are switched, and negated.</p>
<p class="MsoNormal">&nbsp;</p>
<p class="MsoNormal">I filed a gerrit entry which proposes a fix:</p>
<p class="MsoNormal"><a href="http://review.source.kitware.com/#/c/11016/">http://review.source.kitware.com/#/c/11016/</a></p>
<p class="MsoNormal">&nbsp;</p>
<p class="MsoNormal">After that fix the output is as follows:</p>
<p class="MsoNormal">EvaluateDerivative:&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; [42.7697, -9.97885, 22.2913]</p>
<p class="MsoNormal">EvaluateValueAndDerivative: [42.7697, -9.97885, 22.2913]</p>
<p class="MsoNormal">So, equal as it should be.</p>
<p class="MsoNormal">&nbsp;</p>
<p class="MsoNormal">Looking forward to your feedback,</p>
<p class="MsoNormal">Regards, Marius</p>
<p class="MsoNormal">&nbsp;</p>
<p class="MsoNormal"><span lang="EN-GB">Marius Staring, PhD</span></p>
<p class="MsoNormal"><span lang="EN-GB">Division of Image Processing (LKEB)</span></p>
<p class="MsoNormal"><span lang="EN-GB">Department of Radiology</span></p>
<p class="MsoNormal"><span lang="EN-GB">Leiden University Medical Center</span></p>
<p class="MsoNormal"><span lang="EN-GB">PO Box 9600, 2300 RC Leiden, The Netherlands</span></p>
<p class="MsoNormal"><span lang="EN-GB">phone: &#43;31 (0)71 526 2137, fax: &#43;31 (0)71 524 8256</span></p>
<p class="MsoNormal"><span lang="EN-GB"><a href="mailto:m.staring@lumc.nl">m.staring@lumc.nl</a></span></p>
<p class="MsoNormal">&nbsp;</p>
</div>
</div>
</div>
</span><br>
<br>
<hr>
Notice: This UI Health Care e-mail (including attachments) is covered by the Electronic Communications Privacy Act, 18 U.S.C. 2510-2521, is confidential and may be legally privileged.&nbsp; If you are not the intended recipient, you are hereby notified that any
 retention, dissemination, distribution, or copying of this communication is strictly prohibited.&nbsp; Please reply to the sender that you have received the message in error, then delete it.&nbsp; Thank you.
<hr>
</body>
</html>