#include "itkImageFileReader.h"
#include "itkImageFileWriter.h"
#include "itkImage.h"

#include "itkImageIOFactory.h"
#include "itkMINC2ImageIOFactory.h"
#include "itkMINC2ImageIO.h"


namespace {
    typedef signed short                        PixelType;
    const   unsigned int                        Dimension = 3;
    typedef itk::Image<PixelType, Dimension>    ImageType;

    typedef itk::ImageFileReader<ImageType>     ReaderType;
    typedef itk::ImageFileWriter<ImageType>     WriterType;

    typedef itk::MINC2ImageIO                   ImageIOType;
}

int main(int argc, char ** argv) {
    // Verify the number of parameters in the command line
    if ( argc < 3 ) {
        std::cerr << "Usage: " << std::endl;
        std::cerr << argv[0] << " inputImageFile outputImageFile " << std::endl;
        return EXIT_FAILURE;
    }

    ReaderType::Pointer reader = ReaderType::New();
    ImageIOType::Pointer minc2ImageIO = ImageIOType::New();
    reader->SetImageIO(minc2ImageIO);
    const char* inputFilename  = argv[1];
    reader->SetFileName(inputFilename);
    
    try { 
        reader->Update();
    } catch(itk::ExceptionObject& err) { 
        std::cerr << "ExceptionObject caught !" << std::endl; 
        std::cerr << err << std::endl; 
        return EXIT_FAILURE;
    } 
    


    WriterType::Pointer writer = WriterType::New();
    writer->SetImageIO(minc2ImageIO);
    const char* outputFilename = argv[2];
    writer->SetFileName(outputFilename);


    writer->SetInput(reader->GetOutput());


    try { 
        writer->Update(); 
    } catch(itk::ExceptionObject& err) { 
        std::cerr << "ExceptionObject caught !" << std::endl; 
        std::cerr << err << std::endl; 
        return EXIT_FAILURE;
    } 

    return EXIT_SUCCESS;
}