Hi Darren,<br><br><div class="gmail_quote"><blockquote class="gmail_quote" style="border-left: 1px solid rgb(204, 204, 204); margin: 0pt 0pt 0pt 0.8ex; padding-left: 1ex;">What's the latest on this project? Is there a wiki how-to on this?<br>
</blockquote></div><br>The project is currently under active development. Currently, the plugin works with ITK 3.12 on Mac OS X and Linux. Soon it will compile with Visual Studio on Windows as well (pending a commit from me -- and thanks to Alex Gouaillard for his help tracking down some Windows issues).<br>
<br>There are a number of improvements I am in the process of making, including support for RGB and vector images, and dimensions beyond 3D. I would also like to make the build easier to do, as much as possible at least.<br>
<br>You can access the code by checking out the LOCI Software codebase from SVN:<br><br> <a href="https://skyking.microscopy.wisc.edu/svn/java/trunk">https://skyking.microscopy.wisc.edu/svn/java/trunk</a><br><br>The relevant components are in components/native/bf-cpp and components/native/itk-plugin. See the readme.txt files for details. Please note that as of this writing, the skyking server is down due to a large-scale power outage on the UW-Madison campus (some construction mishap, I think).<br>
<br>There is also a preliminary set of wiki pages on how to compile the plugin on the FARSIGHT wiki at:<br><br> <a href="http://farsight-toolkit.org/wiki/FARSIGHT_Tutorials/Building_Software/Bio-Formats">http://farsight-toolkit.org/wiki/FARSIGHT_Tutorials/Building_Software/Bio-Formats</a><br>
<br>Note that you do not actually need to build FARSIGHT to use the ITK plugin as is (the wiki pages are written with the idea that the plugin will be used within FARSIGHT, but there is no requirement to do so). The plugin is merely an ITK ImageIO plugin, and should work with any code that uses itkImageFileReader.<br>
<br>Lastly, a bug introduced in ITK CVS five weeks ago (which should be fixed soon) will prevent the plugin from working properly with image data beyond 2D in certain cases.<br><br>I will keep the list posted on my progress.<br>
<br>-Curtis<br><br><div class="gmail_quote">On Wed, Jun 24, 2009 at 1:48 PM, Darren Weber <span dir="ltr"><<a href="mailto:darren.weber.lists@gmail.com">darren.weber.lists@gmail.com</a>></span> wrote:<br><blockquote class="gmail_quote" style="border-left: 1px solid rgb(204, 204, 204); margin: 0pt 0pt 0pt 0.8ex; padding-left: 1ex;">
<div class="im"><div class="gmail_quote"><blockquote class="gmail_quote" style="border-left: 1px solid rgb(204, 204, 204); margin: 0pt 0pt 0pt 0.8ex; padding-left: 1ex;"><br>
Curtis is working on making bioformats usable from ITK</blockquote></div><br><br></div>What's the latest on this project? Is there a wiki how-to on this?<br><br>Thanks,<br><font color="#888888">Darren<br><br>
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