Hi Luis,<div><br></div><div>The DicomSeriesReadImageWrite2.cxx example works. It helps me to write a series of dicom slices into a single 3D file. </div><div><br></div><div>But the origin of my image is shifted from the upper left hand corner (the input) to the center (ITK output).</div>
<div><br></div><div>I wonder if there is an easy way to fix this problem. Can I simply change some lines in DicomSeriesReadImageWrite2.cxx? </div><div><br></div><div>Thank you,</div><div>Stephen</div><div> <br><div class="gmail_quote">
On Fri, Apr 9, 2010 at 5:13 PM, Luis Ibanez <span dir="ltr"><<a href="mailto:luis.ibanez@kitware.com">luis.ibanez@kitware.com</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex;">
Hi Stephen,<br><br><br>1) The most likely source of the problem is that you are <br> running out of memory.<br><br> a) How much RAM do you have ?<br> b) Do you have a 64bits operating system ?<br> c) Did you compile the application as a 64bits application ?<br>
<br> You may want to run the application again, as you monitor the <br> memory consumption (e.g. by using the TaskManager if you are <br> in Windows, or using the SystemMonitor if you are in Linux).<br><br><br>2) If your images are a series of 2D DICOM files you have two <br>
options:<br><br> a) You can convert them to a single file 3D image by using<br> the code in the Example:<br><br> Insight/Examples/Code/IO/<br> DicomSeriesReadImageWrite2.cxx<br>
<br> and then pass this 3D single file images as input to the<br> deformable application.<br><br> Or<br><br><br> b) You could combine the source code of the example in (a)<br> with the source code of the application that you are running<br>
now.<br><br><br> I will suggest that you start by doing (a), and only move into (b)<br> once you are comfortable writing ITK code.<br><br><br><br><br> Regards,<br><br><br> Luis<br><br><br><br>
<br>-----------------------------------------------------------------------------------<br><br><div class="gmail_quote"><div><div></div><div class="h5">On Thu, Apr 8, 2010 at 5:11 PM, Stephen Yip <span dir="ltr"><<a href="mailto:stephen.fyip1@gmail.com" target="_blank">stephen.fyip1@gmail.com</a>></span> wrote:<br>
</div></div><blockquote class="gmail_quote" style="border-left:1px solid rgb(204, 204, 204);margin:0pt 0pt 0pt 0.8ex;padding-left:1ex"><div><div></div><div class="h5">Hi,<br><br>1. <br>I tried to registered two hdr files by using DeformableRegistration8.cxx. <br>
But I got the following feedback:<br><span style="color:rgb(255, 0, 0)">This application has requested the Runtime to terminate it in an unusual way.</span><br style="color:rgb(255, 0, 0)">
<span style="color:rgb(255, 0, 0)">Please contact the application's support team for more information. </span><br><br>How can I fix it?<br><br>2. <br>DeformableRegsitration 8 only accepts two input files. What if my images are in 3D dicom file? They would have multi-slices. I am unsure how I can treat all these slices as one input file. <br>
<br>Thank you,<br><font color="#888888">stephen<br>
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