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I've a doubt...what is the DICOM DIRECTORY PATH? Because I'm not sure to do what you say me....<br>
<br>
Thanks to anyone will help me, <br>
I hope to hear from you soon <br>
Daniela<br>
<br>
<br>
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From: danysunflower@hotmail.it<br>To: aya.elgebeely@symbyo.com<br>Subject: RE: [Insight-users] DicomSeriesReadImageWrite2_Problem to read dcmSeries<br>Date: Thu, 20 May 2010 08:49:44 +0200<br><br>
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Thanks for your help but I'm not sure to have understood what you means....<br>I give the dicom directory path as you tell me, but the problem is the same.....<br><br>I've this output:<br><br>daniela@daniela-laptop:~/Scrivania/ITK/DCMSeries2DCMVolume/bin$ ./DCMSeries2DCMVolume /home/daniela/Scrivania/ITK/DCMSeries2DCMVolume/bin/ImagesSeries/ out.dcm <br> <br>The directory: <br><br>/home/daniela/Scrivania/ITK/DCMSeries2DCMVolume/bin/ImagesSeries/<br><br>Contains the following DICOM Series: <br><br>1.3.6.1.4.1.9590.100.1.1.10361484212757612641150690902115007521221242<br>1.3.6.1.4.1.9590.100.1.1.104958578313032336937390375850004964647.221242<br>1.3.6.1.4.1.9590.100.1.1.107405759313013746441001957330139037556.221242<br>1.3.6.1.4.1.9590.100.1.1.111061796311836621214237815451365526665.221242<br>1.3.6.1.4.1.9590.100.1.1.111371510912184596024463174462076619397.221242<br>1.3.6.1.4.1.9590.100.1.1.114003144113582087342408426350632299768.221242<br>1.3.6.1.4.1.9590.100.1.1.115069668012691176838860860252871104986.221242<br>1.3.6.1.4.1.9590.100.1.1.115863632711534221931101822980911990082.221242<br>1.3.6.1.4.1.9590.100.1.1.117210875213699775925905320144009158488.221242<br>1.3.6.1.4.1.9590.100.1.1.119305551712024551424636647733186827561.221242<br>1.3.6.1.4.1.9590.100.1.1.124756438512135209838077715403133762381.221242<br>1.3.6.1.4.1.9590.100.1.1.127100014912702946822219170800611195259.221242<br>1.3.6.1.4.1.9590.100.1.1.130904613712586655706082561633711854708.221242<br>1.3.6.1.4.1.9590.100.1.1.132789141911144680733439794193524860925.221242<br>1.3.6.1.4.1.9590.100.1.1.135448922813903449706317500221925740393.221242<br>1.3.6.1.4.1.9590.100.1.1.140381627611042300039716387174096495155.221242<br>1.3.6.1.4.1.9590.100.1.1.144532218413535004936604791574275013149.221242<br>1.3.6.1.4.1.9590.100.1.1.157221514712861930036266622811496897297.221242<br>1.3.6.1.4.1.9590.100.1.1.160223257112208121623193527622719890831.221242<br>1.3.6.1.4.1.9590.100.1.1.160403179611467061711348435733606596103.221242<br>1.3.6.1.4.1.9590.100.1.1.172713343612953281742615330863275523053.221242<br>1.3.6.1.4.1.9590.100.1.1.175656151313701326233705860102033370194.221242<br>1.3.6.1.4.1.9590.100.1.1.178274724111426279710183141672223558981.221242<br>1.3.6.1.4.1.9590.100.1.1.180637138611113043422500405051890976544.221242<br>1.3.6.1.4.1.9590.100.1.1.186730282911486077401357512971164367217.221242<br>1.3.6.1.4.1.9590.100.1.1.192259075012690719635674136851855041374.221242<br>1.3.6.1.4.1.9590.100.1.1.192304153912250864228390368121983284957.221242<br>1.3.6.1.4.1.9590.100.1.1.193484500413409104135181974303210120179.221242<br>1.3.6.1.4.1.9590.100.1.1.19483900012924771942041919211865262431221242<br>1.3.6.1.4.1.9590.100.1.1.195657872811850247602202149461524783890.221242<br>1.3.6.1.4.1.9590.100.1.1.201049653713350628538356901603932718942.221242<br>1.3.6.1.4.1.9590.100.1.1.205015200010636842101619262860733417343.221242<br>1.3.6.1.4.1.9590.100.1.1.205613602911200829614883654510244679940.221242<br>1.3.6.1.4.1.9590.100.1.1.20800626711899110105604105073231958255221242<br>1.3.6.1.4.1.9590.100.1.1.20872103812615579508486015223976135878221242<br>1.3.6.1.4.1.9590.100.1.1.21351735211271066209877047511394413712221242<br>1.3.6.1.4.1.9590.100.1.1.21680937212595594016257117591281029470221242<br>1.3.6.1.4.1.9590.100.1.1.224333664511635846134767287320129334367.221242<br>1.3.6.1.4.1.9590.100.1.1.233908953312421664220188089821972073086.221242<br>1.3.6.1.4.1.9590.100.1.1.234209099110527561139912938521609936297.221242<br>1.3.6.1.4.1.9590.100.1.1.23802820312794295127113987993421697158221242<br>1.3.6.1.4.1.9590.100.1.1.242833846613601180335659779954189495520.221242<br>1.3.6.1.4.1.9590.100.1.1.253032502011790636131304298292828389497.221242<br>1.3.6.1.4.1.9590.100.1.1.255281180411326795728207781183439084004.221242<br>1.3.6.1.4.1.9590.100.1.1.255989415911509155724838153234090034564.221242<br>1.3.6.1.4.1.9590.100.1.1.256703548713845188826113524501483688262.221242<br>1.3.6.1.4.1.9590.100.1.1.261066150512413035806047720024185285532.221242<br>1.3.6.1.4.1.9590.100.1.1.261923240410862384217601248181510658931.221242<br>1.3.6.1.4.1.9590.100.1.1.268721950512337394906243140334041866289.221242<br>1.3.6.1.4.1.9590.100.1.1.27002773911574612438101769393252839446221242<br>1.3.6.1.4.1.9590.100.1.1.271581633012520598328179585500147639169.221242<br>1.3.6.1.4.1.9590.100.1.1.275217719912817877728213459731407722928.221242<br>1.3.6.1.4.1.9590.100.1.1.277517900612931292311799848252902738566.221242<br>1.3.6.1.4.1.9590.100.1.1.284480680412612910037758074081229817663.221242<br>1.3.6.1.4.1.9590.100.1.1.286439761413969307524261925414149551332.221242<br>1.3.6.1.4.1.9590.100.1.1.291305712911989507105097837000895920840.221242<br>1.3.6.1.4.1.9590.100.1.1.292869497411583926927243992940115011216.221242<br>1.3.6.1.4.1.9590.100.1.1.294272493213528938332167299922951678306.221242<br>1.3.6.1.4.1.9590.100.1.1.295432048011872899929460473813532438228.221242<br>1.3.6.1.4.1.9590.100.1.1.296186631012571024433067314041707054768.221242<br>1.3.6.1.4.1.9590.100.1.1.301593916812146160820025722003626446068.221242<br>1.3.6.1.4.1.9590.100.1.1.308036880011475464222555219482749565972.221242<br>1.3.6.1.4.1.9590.100.1.1.309762793512585698333933743481155409607.221242<br>1.3.6.1.4.1.9590.100.1.1.31537236411798195029682792212183975425221242<br>1.3.6.1.4.1.9590.100.1.1.316724547212924806432666494890264926722.221242<br>1.3.6.1.4.1.9590.100.1.1.321890438512454846731899933613141156877.221242<br>1.3.6.1.4.1.9590.100.1.1.32608800911307637908833860023208140871221242<br>1.3.6.1.4.1.9590.100.1.1.332825116910498149003315061000401502685.221242<br>1.3.6.1.4.1.9590.100.1.1.336289553512762651720507229901428345498.221242<br>1.3.6.1.4.1.9590.100.1.1.336498562011885684504085922651903352995.221242<br>1.3.6.1.4.1.9590.100.1.1.346951755412774716126274441202286286506.221242<br>1.3.6.1.4.1.9590.100.1.1.350189582912575955717799599530933104099.221242<br>1.3.6.1.4.1.9590.100.1.1.36458300412833472603234234072687996430221242<br>1.3.6.1.4.1.9590.100.1.1.365342754013142409717392864100025245812.221242<br>1.3.6.1.4.1.9590.100.1.1.367343886412836272303768116671237967763.221242<br>1.3.6.1.4.1.9590.100.1.1.371453199410330370402071443502446155721.221242<br>1.3.6.1.4.1.9590.100.1.1.376711282912854756030326803280901027039.221242<br>1.3.6.1.4.1.9590.100.1.1.377409676713311240436009094542889703106.221242<br>1.3.6.1.4.1.9590.100.1.1.389316412613417667100401875470402172002.221242<br>1.3.6.1.4.1.9590.100.1.1.39465802511786504535533684932439600436221242<br>1.3.6.1.4.1.9590.100.1.1.395125695510859653039905120523042226302.221242<br>1.3.6.1.4.1.9590.100.1.1.398528795512731655934044154101725060478.221242<br>1.3.6.1.4.1.9590.100.1.1.410277870513038087706950595972147283218.221242<br>1.3.6.1.4.1.9590.100.1.1.412045646513052985524670655310954839349.221242<br>1.3.6.1.4.1.9590.100.1.1.416208511312424332830102614362027638482.221242<br>1.3.6.1.4.1.9590.100.1.1.42342430811558317805782007453092171394221242<br>1.3.6.1.4.1.9590.100.1.1.426127881212301683408269948334199655738.221242<br>1.3.6.1.4.1.9590.100.1.1.49241483711184470737460394433295304743221242<br>1.3.6.1.4.1.9590.100.1.1.49455742810565594637753660210668519682221242<br>1.3.6.1.4.1.9590.100.1.1.51443036613822244201683465584071455387221242<br>1.3.6.1.4.1.9590.100.1.1.51826236110766102523378438471747952106221242<br>1.3.6.1.4.1.9590.100.1.1.54586938712268267527783315552319051980221242<br>1.3.6.1.4.1.9590.100.1.1.55004693210536392229810791901280914507221242<br>1.3.6.1.4.1.9590.100.1.1.56593996213466745216522111193927304370221242<br>1.3.6.1.4.1.9590.100.1.1.60877224411871371822157485202711878743221242<br>1.3.6.1.4.1.9590.100.1.1.64322360612199230734233860122330178898221242<br>1.3.6.1.4.1.9590.100.1.1.66401018112950258816371047714219464939221242<br>1.3.6.1.4.1.9590.100.1.1.89578728812936033115031064410795050582221242<br><br><br>Now reading series: <br><br>1.3.6.1.4.1.9590.100.1.1.10361484212757612641150690902115007521221242<br><br><br>Writing the image as <br><br>out.dcm<br><br>Where is my error?<br><br>Regards<br>Daniela<br><br>
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Date: Thu, 20 May 2010 08:39:29 +0300<br>Subject: Re: [Insight-users] DicomSeriesReadImageWrite2_Problem to read dcmSeries<br>From: aya.elgebeely@symbyo.com<br>To: danysunflower@hotmail.it<br><br>
<div dir="ltr">Hi Daniela,<br clear="all"><br>I think you should give the DicomSeries reader the dicom directory path, then it will read all .dcm files included in this DIR, not the entire dicom images path.<br><br>Regards,<br><br>
<div class="ecxecxecxgmail_quote">On 19 May 2010 12:59, Daniela Sacchetto <span dir="ltr"><<a href="mailto:danysunflower@hotmail.it">danysunflower@hotmail.it</a>></span> wrote:<br>
<blockquote class="ecxecxecxgmail_quote" style="padding-left: 1ex;">
<div>Hi everyone!<br><br>I've a problem with DicomSeriesReadImageWrite2.<br>I've to read 98 .dcm US images and then save them as an only .dcm 3D image....<br>I'm trying to use DicomSeriesReadImageWrite2 but I've a strange result: my output image is made by only a frame!!!<br><br>I think that my program read every .dcm image as a DicomSeries and so it works only with the first...<br><br>In fact the output on my code is:<br>---------------------------------------------------------------------------------------<br>The directory: <br><br>./ImagesSeries/<br><br>Contains the following DICOM Series: <br><br>1.3.6.1.4.1.9590.100.1.1.10361484212757612641150690902115007521221242<br>1.3.6.1.4.1.9590.100.1.1.104958578313032336937390375850004964647.221242<br>1.3.6.1.4.1.9590.100.1.1.107405759313013746441001957330139037556.221242<br>1.3.6.1.4.1.9590.100.1.1.111061796311836621214237815451365526665.221242<br>1.3.6.1.4.1.9590.100.1.1.111371510912184596024463174462076619397.221242<br>1.3.6.1.4.1.9590.100.1.1.114003144113582087342408426350632299768.221242<br>1.3.6.1.4.1.9590.100.1.1.115069668012691176838860860252871104986.221242<br>1.3.6.1.4.1.9590.100.1.1.115863632711534221931101822980911990082.221242<br>1.3.6.1.4.1.9590.100.1.1.117210875213699775925905320144009158488.221242<br>1.3.6.1.4.1.9590.100.1.1.119305551712024551424636647733186827561.221242<br>1.3.6.1.4.1.9590.100.1.1.124756438512135209838077715403133762381.221242<br>1.3.6.1.4.1.9590.100.1.1.127100014912702946822219170800611195259.221242<br>1.3.6.1.4.1.9590.100.1.1.130904613712586655706082561633711854708.221242<br>1.3.6.1.4.1.9590.100.1.1.132789141911144680733439794193524860925.221242<br>1.3.6.1.4.1.9590.100.1.1.135448922813903449706317500221925740393.221242<br>1.3.6.1.4.1.9590.100.1.1.140381627611042300039716387174096495155.221242<br>1.3.6.1.4.1.9590.100.1.1.144532218413535004936604791574275013149.221242<br>1.3.6.1.4.1.9590.100.1.1.157221514712861930036266622811496897297.221242<br>1.3.6.1.4.1.9590.100.1.1.160223257112208121623193527622719890831.221242<br>1.3.6.1.4.1.9590.100.1.1.160403179611467061711348435733606596103.221242<br>1.3.6.1.4.1.9590.100.1.1.172713343612953281742615330863275523053.221242<br>1.3.6.1.4.1.9590.100.1.1.175656151313701326233705860102033370194.221242<br>1.3.6.1.4.1.9590.100.1.1.178274724111426279710183141672223558981.221242<br>1.3.6.1.4.1.9590.100.1.1.180637138611113043422500405051890976544.221242<br>1.3.6.1.4.1.9590.100.1.1.186730282911486077401357512971164367217.221242<br>1.3.6.1.4.1.9590.100.1.1.192259075012690719635674136851855041374.221242<br>1.3.6.1.4.1.9590.100.1.1.192304153912250864228390368121983284957.221242<br>1.3.6.1.4.1.9590.100.1.1.193484500413409104135181974303210120179.221242<br>1.3.6.1.4.1.9590.100.1.1.19483900012924771942041919211865262431221242<br>1.3.6.1.4.1.9590.100.1.1.195657872811850247602202149461524783890.221242<br>1.3.6.1.4.1.9590.100.1.1.201049653713350628538356901603932718942.221242<br>1.3.6.1.4.1.9590.100.1.1.205015200010636842101619262860733417343.221242<br>1.3.6.1.4.1.9590.100.1.1.205613602911200829614883654510244679940.221242<br>1.3.6.1.4.1.9590.100.1.1.20800626711899110105604105073231958255221242<br>1.3.6.1.4.1.9590.100.1.1.20872103812615579508486015223976135878221242<br>1.3.6.1.4.1.9590.100.1.1.21351735211271066209877047511394413712221242<br>1.3.6.1.4.1.9590.100.1.1.21680937212595594016257117591281029470221242<br>1.3.6.1.4.1.9590.100.1.1.224333664511635846134767287320129334367.221242<br>1.3.6.1.4.1.9590.100.1.1.233908953312421664220188089821972073086.221242<br>1.3.6.1.4.1.9590.100.1.1.234209099110527561139912938521609936297.221242<br>1.3.6.1.4.1.9590.100.1.1.23802820312794295127113987993421697158221242<br>1.3.6.1.4.1.9590.100.1.1.242833846613601180335659779954189495520.221242<br>1.3.6.1.4.1.9590.100.1.1.253032502011790636131304298292828389497.221242<br>1.3.6.1.4.1.9590.100.1.1.255281180411326795728207781183439084004.221242<br>1.3.6.1.4.1.9590.100.1.1.255989415911509155724838153234090034564.221242<br>1.3.6.1.4.1.9590.100.1.1.256703548713845188826113524501483688262.221242<br>1.3.6.1.4.1.9590.100.1.1.261066150512413035806047720024185285532.221242<br>1.3.6.1.4.1.9590.100.1.1.261923240410862384217601248181510658931.221242<br>1.3.6.1.4.1.9590.100.1.1.268721950512337394906243140334041866289.221242<br>1.3.6.1.4.1.9590.100.1.1.27002773911574612438101769393252839446221242<br>1.3.6.1.4.1.9590.100.1.1.271581633012520598328179585500147639169.221242<br>1.3.6.1.4.1.9590.100.1.1.275217719912817877728213459731407722928.221242<br>1.3.6.1.4.1.9590.100.1.1.277517900612931292311799848252902738566.221242<br>1.3.6.1.4.1.9590.100.1.1.284480680412612910037758074081229817663.221242<br>1.3.6.1.4.1.9590.100.1.1.286439761413969307524261925414149551332.221242<br>1.3.6.1.4.1.9590.100.1.1.291305712911989507105097837000895920840.221242<br>1.3.6.1.4.1.9590.100.1.1.292869497411583926927243992940115011216.221242<br>1.3.6.1.4.1.9590.100.1.1.294272493213528938332167299922951678306.221242<br>1.3.6.1.4.1.9590.100.1.1.295432048011872899929460473813532438228.221242<br>1.3.6.1.4.1.9590.100.1.1.296186631012571024433067314041707054768.221242<br>1.3.6.1.4.1.9590.100.1.1.301593916812146160820025722003626446068.221242<br>1.3.6.1.4.1.9590.100.1.1.308036880011475464222555219482749565972.221242<br>1.3.6.1.4.1.9590.100.1.1.309762793512585698333933743481155409607.221242<br>1.3.6.1.4.1.9590.100.1.1.31537236411798195029682792212183975425221242<br>1.3.6.1.4.1.9590.100.1.1.316724547212924806432666494890264926722.221242<br>1.3.6.1.4.1.9590.100.1.1.321890438512454846731899933613141156877.221242<br>1.3.6.1.4.1.9590.100.1.1.32608800911307637908833860023208140871221242<br>1.3.6.1.4.1.9590.100.1.1.332825116910498149003315061000401502685.221242<br>1.3.6.1.4.1.9590.100.1.1.336289553512762651720507229901428345498.221242<br>1.3.6.1.4.1.9590.100.1.1.336498562011885684504085922651903352995.221242<br>1.3.6.1.4.1.9590.100.1.1.346951755412774716126274441202286286506.221242<br>1.3.6.1.4.1.9590.100.1.1.350189582912575955717799599530933104099.221242<br>1.3.6.1.4.1.9590.100.1.1.36458300412833472603234234072687996430221242<br>1.3.6.1.4.1.9590.100.1.1.365342754013142409717392864100025245812.221242<br>1.3.6.1.4.1.9590.100.1.1.367343886412836272303768116671237967763.221242<br>1.3.6.1.4.1.9590.100.1.1.371453199410330370402071443502446155721.221242<br>1.3.6.1.4.1.9590.100.1.1.376711282912854756030326803280901027039.221242<br>1.3.6.1.4.1.9590.100.1.1.377409676713311240436009094542889703106.221242<br>1.3.6.1.4.1.9590.100.1.1.389316412613417667100401875470402172002.221242<br>1.3.6.1.4.1.9590.100.1.1.39465802511786504535533684932439600436221242<br>1.3.6.1.4.1.9590.100.1.1.395125695510859653039905120523042226302.221242<br>1.3.6.1.4.1.9590.100.1.1.398528795512731655934044154101725060478.221242<br>1.3.6.1.4.1.9590.100.1.1.410277870513038087706950595972147283218.221242<br>1.3.6.1.4.1.9590.100.1.1.412045646513052985524670655310954839349.221242<br>1.3.6.1.4.1.9590.100.1.1.416208511312424332830102614362027638482.221242<br>1.3.6.1.4.1.9590.100.1.1.42342430811558317805782007453092171394221242<br>1.3.6.1.4.1.9590.100.1.1.426127881212301683408269948334199655738.221242<br>1.3.6.1.4.1.9590.100.1.1.49241483711184470737460394433295304743221242<br>1.3.6.1.4.1.9590.100.1.1.49455742810565594637753660210668519682221242<br>1.3.6.1.4.1.9590.100.1.1.51443036613822244201683465584071455387221242<br>1.3.6.1.4.1.9590.100.1.1.51826236110766102523378438471747952106221242<br>1.3.6.1.4.1.9590.100.1.1.54586938712268267527783315552319051980221242<br>1.3.6.1.4.1.9590.100.1.1.55004693210536392229810791901280914507221242<br>1.3.6.1.4.1.9590.100.1.1.56593996213466745216522111193927304370221242<br>1.3.6.1.4.1.9590.100.1.1.60877224411871371822157485202711878743221242<br>1.3.6.1.4.1.9590.100.1.1.64322360612199230734233860122330178898221242<br>1.3.6.1.4.1.9590.100.1.1.66401018112950258816371047714219464939221242<br>1.3.6.1.4.1.9590.100.1.1.89578728812936033115031064410795050582221242<br><br><br>Now reading series: <br><br>1.3.6.1.4.1.9590.100.1.1.10361484212757612641150690902115007521221242<br><br><br>Writing the image as <br><br>out2.dcm<br>---------------------------------------------------------------------------------------------------------------<br><br>How can I say to my program that all the 98 dcm image are ''my series''?<br>I saved the 98 frames in a new fold ''ImagesSeries'' and I pass that directory to my program....<br><br><br>Thanks everyone<br>Daniela<br><br><br>
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