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<DIV>Hi</DIV>
<DIV> </DIV>
<DIV>I think it’s in range. Can you show your code ? what exactly you trying to
do ? After reading file are you using any filter and then doing ROI filter
?</DIV>
<DIV> </DIV>
<DIV>Alex<BR></DIV>
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<DIV style="font-color: black"><B>From:</B> <A title=abayiz@yahoo.com
href="mailto:abayiz@yahoo.com">Abayiz</A> </DIV>
<DIV><B>Sent:</B> Thursday, March 01, 2012 1:04 PM</DIV>
<DIV><B>To:</B> <A title=alexdowson@hotmail.com
href="mailto:alexdowson@hotmail.com">alex Dowson</A> </DIV>
<DIV><B>Cc:</B> <A title=insight-users@itk.org
href="mailto:insight-users@itk.org">itk</A> </DIV>
<DIV><B>Subject:</B> Re: [Insight-users] Fwd: How to Truncate Dicom
Series?</DIV></DIV></DIV>
<DIV> </DIV></DIV>
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<DIV><SPAN>Hello,</SPAN></DIV>
<DIV><BR><SPAN></SPAN></DIV>
<DIV><SPAN>The size of input image is [220, 250, 144], and that of ROI image is
[220,225,144]. <BR></SPAN></DIV>
<DIV>Any suggestion?</DIV>
<DIV><BR><SPAN></SPAN></DIV>
<DIV><SPAN>Thanks :) </SPAN></DIV>
<DIV> </DIV>
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<B><SPAN style="FONT-WEIGHT: bold">From:</SPAN></B> alex Dowson
<alexdowson@hotmail.com><BR><B><SPAN
style="FONT-WEIGHT: bold">To:</SPAN></B> Abayiz <abayiz@yahoo.com>; John
Drescher <drescherjm@gmail.com> <BR><B><SPAN
style="FONT-WEIGHT: bold">Cc:</SPAN></B> itk <insight-users@itk.org>
<BR><B><SPAN style="FONT-WEIGHT: bold">Sent:</SPAN></B> Thursday, March 1, 2012
6:11 AM<BR><B><SPAN style="FONT-WEIGHT: bold">Subject:</SPAN></B> Re:
[Insight-users] Fwd: How to Truncate Dicom Series?<BR></FONT></DIV>
<DIV> </DIV>
<DIV id=yiv423309433>
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<DIV>Hi</DIV>
<DIV> </DIV>
<DIV>What is your size and index of input image and ROI image ?</DIV>
<DIV> </DIV>
<DIV><BR> </DIV>
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<DIV> </DIV>
<DIV style="BACKGROUND: rgb(245,245,245)">
<DIV><B>From:</B> <A title=abayiz@yahoo.com href="mailto:abayiz@yahoo.com"
rel=nofollow target=_blank ymailto="mailto:abayiz@yahoo.com">Abayiz</A> </DIV>
<DIV><B>Sent:</B> Wednesday, February 29, 2012 8:37 PM</DIV>
<DIV><B>To:</B> <A title=drescherjm@gmail.com href="mailto:drescherjm@gmail.com"
rel=nofollow target=_blank ymailto="mailto:drescherjm@gmail.com">John
Drescher</A> </DIV>
<DIV><B>Cc:</B> <A title=insight-users@itk.org
href="mailto:insight-users@itk.org" rel=nofollow target=_blank
ymailto="mailto:insight-users@itk.org">itk</A> </DIV>
<DIV><B>Subject:</B> Re: [Insight-users] Fwd: How to Truncate Dicom
Series?</DIV></DIV></DIV>
<DIV> </DIV></DIV>
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style="FONT-STYLE: normal; DISPLAY: inline; FONT-FAMILY: 'Calibri'; COLOR: rgb(0,0,0); FONT-SIZE: small; FONT-WEIGHT: normal; TEXT-DECORATION: none">
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<DIV><SPAN>Hello,</SPAN></DIV>
<DIV><BR><SPAN></SPAN></DIV>
<DIV><SPAN>Actually I found that I can handle this problem by using
itkRegionOfInterestImageFiler, it works quite well, except it started to
truncate the image from the opposite of the desired direction. Then I tried to
set its index, but it gave me this error:</SPAN></DIV>
<DIV><SPAN><BR></SPAN></DIV>
<DIV>********************************************<BR><SPAN></SPAN></DIV>
<DIV><SPAN>Requested region is (at least partially) outside the largest possible
region</SPAN></DIV>
<DIV>********************************************</DIV>
<DIV> </DIV>
<DIV><BR><SPAN></SPAN></DIV>
<DIV><SPAN>I've already used "UpdateLargestPossibleRegion()" method, here is the
partial code:</SPAN></DIV>
<DIV><SPAN><BR></SPAN></DIV>
<DIV>********************************************<BR><SPAN></SPAN></DIV>
<DIV><SPAN>reader->SetFileName(argv[1]);<BR>
reader->Update();<BR>
reader->UpdateLargestPossibleRegion();</SPAN></DIV>
<DIV><BR><SPAN></SPAN></DIV>
<DIV><SPAN> ImageType::RegionType desiredRegion;<BR>
desiredRegion.SetSize(size);<BR>
desiredRegion.SetIndex(start);<BR> <BR>
filter->SetRegionOfInterest(desiredRegion);<BR>
filter->SetInput(reader->GetOutput());<BR><BR> WriterType::Pointer
writer = WriterType::New();<BR> writer->SetFileName ( argv[2]
);<BR> writer->SetInput ( filter->GetOutput() );<BR>
writer->Update();</SPAN></DIV>
<DIV>********************************************<BR><SPAN></SPAN></DIV>
<DIV><BR><SPAN></SPAN></DIV>
<DIV><SPAN>Can anyone help? Thanks in advance. </SPAN></DIV>
<DIV> </DIV>
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<B><SPAN style="FONT-WEIGHT: bold">From:</SPAN></B> John Drescher
<drescherjm@gmail.com><BR><B><SPAN
style="FONT-WEIGHT: bold">To:</SPAN></B> Insight Users
<insight-users@itk.org> <BR><B><SPAN
style="FONT-WEIGHT: bold">Sent:</SPAN></B> Tuesday, February 28, 2012 4:05
PM<BR><B><SPAN style="FONT-WEIGHT: bold">Subject:</SPAN></B> [Insight-users]
Fwd: How to Truncate Dicom Series?<BR></FONT></DIV><BR>---------- Forwarded
message ----------<BR>From: Abayiz <<A href="mailto:abayiz@yahoo.com"
rel=nofollow target=_blank
ymailto="mailto:abayiz@yahoo.com">abayiz@yahoo.com</A>><BR>Date: Tue, Feb 28,
2012 at 7:44 AM<BR>Subject: Re: [Insight-users] How to Truncate Dicom
Series?<BR>To: John Drescher <<A href="mailto:drescherjm@gmail.com"
rel=nofollow target=_blank
ymailto="mailto:drescherjm@gmail.com">drescherjm@gmail.com</A>><BR><BR><BR>Hi,<BR><BR>I
didn't find any way to do that as you suggested. Seems like there is<BR>no way
to set the index for the itkImageWriter. Am I doing
wrong?<BR><BR>________________________________<BR>From: John Drescher <<A
href="mailto:drescherjm@gmail.com" rel=nofollow target=_blank
ymailto="mailto:drescherjm@gmail.com">drescherjm@gmail.com</A>><BR>To: Abayiz
<<A href="mailto:abayiz@yahoo.com" rel=nofollow target=_blank
ymailto="mailto:abayiz@yahoo.com">abayiz@yahoo.com</A>><BR>Cc: alex Dowson
<<A href="mailto:alexdowson@hotmail.com" rel=nofollow target=_blank
ymailto="mailto:alexdowson@hotmail.com">alexdowson@hotmail.com</A>>; itk
<<A href="mailto:insight-users@itk.org" rel=nofollow target=_blank
ymailto="mailto:insight-users@itk.org">insight-users@itk.org</A>><BR>Sent:
Tuesday, February 28, 2012 2:22 PM<BR><BR>Subject: Re: [Insight-users] How to
Truncate Dicom Series?<BR><BR>> Thank you for your reply. I also checked that
example, but it starts to read<BR>> all the images, but I want to give up
some slices of the original data. Any<BR>> suggestions?<BR>><BR>Read the
series and then write it truncated.<BR><BR>John<BR><BR><BR><BR><BR>-- <BR>John
M. Drescher<BR>_____________________________________<BR>Powered by <A
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