<html><body><div style="color:#000; background-color:#fff; font-family:times new roman, new york, times, serif;font-size:12pt"><div><span>Hi Hans,</span></div><div><br><span></span></div><div><span>Thank you very much for your answer. It also sounds good :) <br></span></div><div><br><span></span></div><div><span>Regards,</span></div><div><span>Abayiz</span></div><div><br></div> <div style="font-family: times new roman,new york,times,serif; font-size: 12pt;"> <div style="font-family: times new roman,new york,times,serif; font-size: 12pt;"> <div dir="ltr"> <font face="Arial" size="2"> <hr size="1"> <b><span style="font-weight: bold;">From:</span></b> "Johnson, Hans J" <hans-johnson@uiowa.edu><br> <b><span style="font-weight: bold;">To:</span></b> Abayiz <abayiz@yahoo.com>; itk <insight-users@itk.org> <br> <b><span style="font-weight: bold;">Sent:</span></b> Wednesday, May 2, 2012 4:00 PM<br> <b><span style="font-weight:
bold;">Subject:</span></b> Re: [Insight-users] Build vector field from rigid transformation parameters<br> </font> </div> <br>
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<div>If you download the latest version of BRAINS:</div>
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<div>git clone <a rel="nofollow" ymailto="mailto:git@github.com" target="_blank" href="mailto:git@github.com">git@github.com</a>:BRAINSia/BRAINSStandAlone.git</div>
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<div>mkdir BSA-build</div>
<div>cd BSA-build</div>
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<div>Then there a is a program called BRAINSTransformConvert that you can use:</div>
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<div>BRAINSTransformConvert --inputTransform myVersorParameters.mat --outputTransformType DisplacementField --displacementVolume MyVectorField.nrrd --referenceVolume myReferenceVolume.nii.gz</div>
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<div>This tool will be incorporated with the Slicer package later this summer.</div>
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<div>Hans</div>
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<div style="font-family: Calibri; font-size: 15px;"><font face="Arial" size="2"><span style="font-size: 10pt;">Hans J. Johnson, Ph.D.</span></font></div>
<div style="font-family: Calibri; font-size: 15px;"><font face="Arial" size="2"><span style="font-size: 10pt;"><a rel="nofollow" ymailto="mailto:hans-johnson@uiowa.edu" target="_blank" href="mailto:hans-johnson@uiowa.edu">hans-johnson@uiowa.edu</a></span></font></div>
<div style="font-family: Calibri; font-size: 15px;"><font face="Arial" size="2"><span style="font-size: 10pt;">Assistant Professor of Psychiatry</span></font></div>
<div style="font-family: Calibri; font-size: 15px;"><span class="yiv1679638545Apple-style-span" style="font-size: 13px; font-family: Arial;">University of Iowa Carver College of Medicine</span></div>
<div style="font-family: Calibri; font-size: 15px;"><font face="Arial" size="2"><span style="font-size: 10pt;"><span class="yiv1679638545Apple-style-span" style="font-family: Calibri; font-size: 15px;">
<div><span class="yiv1679638545Apple-style-span" style="font-size: 13px; font-family: Arial;">W278 GH, 200 Hawkins Drive</span></div>
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<div style="font-family: Calibri; font-size: 15px;"><font face="Arial" size="2"><span style="font-size: 10pt;">Iowa City, Iowa 52242</span></font></div>
<div style="font-family: Calibri; font-size: 15px;"><font face="Arial" size="2"><span style="font-size: 10pt;">Phone: 319-353-8587</span></font></div>
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<span style="font-weight: bold;">From: </span>Abayiz <<a rel="nofollow" ymailto="mailto:abayiz@yahoo.com" target="_blank" href="mailto:abayiz@yahoo.com">abayiz@yahoo.com</a>><br>
<span style="font-weight: bold;">Reply-To: </span>Abayiz <<a rel="nofollow" ymailto="mailto:abayiz@yahoo.com" target="_blank" href="mailto:abayiz@yahoo.com">abayiz@yahoo.com</a>><br>
<span style="font-weight: bold;">Date: </span>Wednesday, May 2, 2012 3:09 AM<br>
<span style="font-weight: bold;">To: </span>itk <<a rel="nofollow" ymailto="mailto:insight-users@itk.org" target="_blank" href="mailto:insight-users@itk.org">insight-users@itk.org</a>><br>
<span style="font-weight: bold;">Subject: </span>[Insight-users] Build vector field from rigid transformation parameters<br>
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<div>Hello,</div>
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<div>I want to build a corresponding vector field from transformation parameters of a rigid registration. Since they are of different type, I have difficulties. Is there any filter for doing this?
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<div>Thank you. <br>
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<div>Abayiz</div>
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