<html><head></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; ">Hi,<div><br></div><div>I'm looking for some tips about how can I reduce the compilation time. I created some libraries Metric1.a, Metric2.a, Metric3.a, BlockMatching.a and MyRegistration.a to compile just the modified code and not all of it.</div><div><br></div><div>In my code, I use this main class:</div><div><br></div><div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><font class="Apple-style-span" face="Helvetica" size="3">#include <itkSymmetricForcesDemonsRegistrationFilter.h></font></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><font class="Apple-style-span" face="Helvetica" size="3">#include <itkMultiResolutionPDEDeformableRegistration.h></font></div></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><font class="Apple-style-span" face="Helvetica" size="3">#include <itkBSplineInterpolateImageFunction.h></font></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><font class="Apple-style-span" face="Helvetica" size="3">#include <itkMultiResolutionImageRegistrationMethod.h></font></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><font class="Apple-style-span" face="Helvetica" size="3">#include <itkMultiResolutionPyramidImageFilter.h></font></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><font class="Apple-style-span" face="Helvetica" size="3">#include <itkBSplineTransform.h></font></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><font class="Apple-style-span" face="Helvetica" size="3">#include <itkRegularStepGradientDescentOptimizer.h></font></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><font class="Apple-style-span" face="Helvetica" size="3">#include <itkLBFGSBOptimizer.h></font></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><font class="Apple-style-span" face="Helvetica" size="3">#include <itkConjugateGradientOptimizer.h></font></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><font class="Apple-style-span" face="Helvetica" size="3">#include <itkLinearInterpolateImageFunction.h></font></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><font class="Apple-style-span" face="Helvetica" size="3">#include <itkInterpolateImageFunction.h></font></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><font class="Apple-style-span" face="Helvetica" size="3">#include <itkResampleImageFilter.h></font></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><font class="Apple-style-span" face="Helvetica" size="3">#include <itkRecursiveMultiResolutionPyramidImageFilter.h></font></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><font class="Apple-style-span" face="Helvetica" size="3">#include <itkCovariantVector.h></font></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><font class="Apple-style-span" face="Helvetica" size="3">#include <itkMeanSquaresImageToImageMetric.h></font></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><font class="Apple-style-span" face="Helvetica" size="3">#include <itkBinaryDilateImageFilter.h></font></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><font class="Apple-style-span" face="Helvetica" size="3">#include <itkResampleImageFilter.h></font></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><font class="Apple-style-span" face="Helvetica" size="3">#include <itkExtractImageFilter.h></font></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><font class="Apple-style-span" face="Helvetica" size="3">#include <itkWarpImageFilter.h></font></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><font class="Apple-style-span" face="Helvetica" size="3">#include <itkMultiResolutionPDEDeformableRegistration.h></font></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><font class="Apple-style-span" face="Helvetica" size="3">#include <itkRescaleIntensityImageFilter.h></font></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><font class="Apple-style-span" face="Helvetica" size="3">#include <itkBinaryThresholdImageFilter.h></font></div></div></div></div></div></div></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><font class="Apple-style-span" face="Helvetica" size="3">#include <itkImageRandomConstIteratorWithIndex.h></font></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; color: rgb(255, 255, 255); "><span style="text-decoration: underline"><br></span></div></div></div></div></div></div><div>Also, I work with different types of pixels in 2D, 3D and 4D:</div><div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><font class="Apple-style-span" face="Helvetica" size="3">unsigned char</font></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><font class="Apple-style-span" face="Helvetica" size="3">char</font></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><font class="Apple-style-span" face="Helvetica" size="3">unsigned short</font></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><font class="Apple-style-span" face="Helvetica" size="3">short</font></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><font class="Apple-style-span" face="Helvetica" size="3">unsigned int</font></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><font class="Apple-style-span" face="Helvetica" size="3">int</font></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><font class="Apple-style-span" face="Helvetica" size="3">unsigned long</font></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><font class="Apple-style-span" face="Helvetica" size="3">long</font></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><font class="Apple-style-span" face="Helvetica" size="3">float</font></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><font class="Apple-style-span" face="Helvetica" size="3">double</font></div></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><font class="Apple-style-span" face="Helvetica" size="3"><br></font></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><font class="Apple-style-span" face="Helvetica" size="3"><br></font></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; font: normal normal normal 11px/normal Monaco; "><span class="Apple-style-span" style="font-family: Helvetica; font-size: medium; ">The main problem is that the code takes too much time to compile (I use itk-4.3, vtk-5.10 and gcc 4.2). If anyone could give me some tips about how can I reduce the compiling time it would be really useful.</span></div><div><br></div><div>In the CMakeList.txt I link the libraries and the main code with ${ITK_LIBRARIES} (I couldn't find the ITKRegistrationCommon library to use just this library).</div><div><br><div apple-content-edited="true">
<div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><span class="Apple-style-span" style="border-collapse: separate; font-variant: normal; letter-spacing: normal; line-height: normal; orphans: 2; text-align: -webkit-auto; text-indent: 0px; text-transform: none; white-space: normal; widows: 2; word-spacing: 0px; -webkit-border-horizontal-spacing: 0px; -webkit-border-vertical-spacing: 0px; -webkit-text-decorations-in-effect: none; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; "><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><span class="Apple-style-span" style="border-collapse: separate; font-variant: normal; letter-spacing: normal; line-height: normal; orphans: 2; text-align: -webkit-auto; text-indent: 0px; text-transform: none; white-space: normal; widows: 2; word-spacing: 0px; -webkit-border-horizontal-spacing: 0px; -webkit-border-vertical-spacing: 0px; -webkit-text-decorations-in-effect: none; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; "><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><div><div style="color: rgb(0, 0, 0); font-family: Helvetica; font-size: medium; font-weight: normal; font-style: normal; "><div style="color: rgb(0, 0, 0); font-family: Helvetica; font-size: medium; font-weight: normal; font-style: normal; ">Regards,</div><div style="color: rgb(0, 0, 0); font-family: Helvetica; font-size: medium; font-weight: normal; font-style: normal; ">__________________________________<br><font class="Apple-style-span" color="#b7bfc5">|</font> Ariel Hernán Curiale Ph.D Student<br><font class="Apple-style-span" color="#b7bfc5">|</font> ETSI Telecomunicación<br><font class="Apple-style-span" color="#b7bfc5">|</font> Universidad de Valladolid<br><font class="Apple-style-span" color="#b7bfc5">|</font> Campus Miguel Delibes<br><font class="Apple-style-span" color="#b7bfc5">|</font> 47011 Valladolid, Spain<br><font class="Apple-style-span" color="#b7bfc5">|</font> Phone: 983-423000 ext. 5590</div><div><font class="Apple-style-span" color="#b7b7b7" style="font-family: Helvetica; font-size: medium; font-weight: normal; font-style: normal; ">|</font> Web: <a href="http://www.curiale.com.ar/"><font class="Apple-style-span" color="#084ebe">www.curiale.com.ar</font></a><br><font class="Apple-style-span" color="#b7b7b7" style="font-family: Helvetica; font-size: medium; font-weight: normal; font-style: normal; ">|</font><span class="Apple-style-span" style="font-family: Helvetica; font-size: medium; font-weight: normal; font-style: normal; color: rgb(0, 0, 0); ">_________________________________</span></div></div></div></div></span></div></span></div></div></div></div></div></div></div></div></div></div></div></div></div></div>
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