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itkBloxBoundaryProfileImageToBloxCoreAtomImageFilter.h

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00001 /*========================================================================= 00002 00003 Program: Insight Segmentation & Registration Toolkit 00004 Module: $RCSfile: itkBloxBoundaryProfileImageToBloxCoreAtomImageFilter.h,v $ 00005 Language: C++ 00006 Date: $Date: 2003/09/10 14:28:45 $ 00007 Version: $Revision: 1.4 $ 00008 00009 Copyright (c) Insight Software Consortium. All rights reserved. 00010 See ITKCopyright.txt or http://www.itk.org/HTML/Copyright.htm for details. 00011 00012 This software is distributed WITHOUT ANY WARRANTY; without even 00013 the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR 00014 PURPOSE. See the above copyright notices for more information. 00015 00016 =========================================================================*/ 00017 00018 #ifndef __itkBloxBoundaryProfileImageToBloxCoreAtomImageFilter_h 00019 #define __itkBloxBoundaryProfileImageToBloxCoreAtomImageFilter_h 00020 00021 #include "itkImageToImageFilter.h" 00022 #include "itkPoint.h" 00023 #include "itkVector.h" 00024 #include "itkCovariantVector.h" 00025 #include "itkBloxBoundaryProfileItem.h" 00026 #include "itkBloxBoundaryProfilePixel.h" 00027 #include "itkBloxBoundaryProfileImage.h" 00028 #include "itkBloxCoreAtomItem.h" 00029 #include "itkBloxCoreAtomPixel.h" 00030 #include "itkBloxCoreAtomImage.h" 00031 00032 namespace itk 00033 { 00034 00038 template< typename TSourceImage, unsigned int dim > 00039 class ITK_EXPORT BloxBoundaryProfileImageToBloxCoreAtomImageFilter : 00040 public ImageToImageFilter< BloxBoundaryProfileImage<dim>, 00041 BloxCoreAtomImage<dim> > 00042 { 00043 public: 00045 typedef BloxBoundaryProfileImageToBloxCoreAtomImageFilter Self; 00046 typedef ImageToImageFilter<BloxBoundaryProfileImage<dim>, 00047 BloxCoreAtomImage<dim> > Superclass; 00048 typedef SmartPointer<Self> Pointer; 00049 typedef SmartPointer<const Self> ConstPointer; 00050 00052 itkNewMacro(Self); 00053 00055 itkTypeMacro( itkBloxBoundaryProfileImageToBloxCoreAtomImageFilter, ImageToImageFilter ); 00056 00058 itkStaticConstMacro(NDimensions, unsigned int, TSourceImage::ImageDimension); 00059 00060 typedef BloxCoreAtomImage<dim> TOutputImage; 00061 typedef BloxCoreAtomImage<dim> OutputImageType; 00062 typedef typename OutputImageType::Pointer OutputImagePointer; 00063 00065 typedef BloxBoundaryProfileImage<dim> BoundaryProfileImageType; 00066 typedef typename BoundaryProfileImageType::Pointer BoundaryProfileImagePointer; 00067 typedef typename BoundaryProfileImageType::RegionType BoundaryProfileImageRegionType; 00068 typedef typename BoundaryProfileImageType::PixelType BoundaryProfileImagePixelType; 00069 typedef typename BoundaryProfileImageType::ConstPointer BoundaryProfileImageConstPointer; 00070 00072 typedef TSourceImage SourceImageType; 00073 typedef typename SourceImageType::Pointer SourceImagePointer; 00074 typedef typename SourceImageType::RegionType SourceImageRegionType; 00075 typedef typename SourceImageType::PixelType SourceImagePixelType; 00076 typedef typename SourceImageType::ConstPointer SourceImageConstPointer; 00077 typedef typename SourceImageType::IndexType SourceImageIndexType; 00078 00080 typedef Size<itkGetStaticConstMacro(NDimensions)> SizeType; 00081 00083 typedef typename TOutputImage::IndexType IndexType; 00084 00086 typedef typename TOutputImage::PixelType PixelType; 00087 00089 typedef typename TOutputImage::RegionType OutputImageRegionType; 00090 00092 typedef Point<double, itkGetStaticConstMacro(NDimensions)> PositionType; 00093 00095 typedef typename PositionType::VectorType VectorType; 00096 00098 typedef CovariantVector<double, itkGetStaticConstMacro(NDimensions)> GradientType; 00099 00101 void FindCoreAtoms(); 00102 00104 void FindCoreAtomsAtBoundaryPoint(BloxBoundaryProfileItem<dim>* pItem); 00105 00107 itkSetMacro(DistanceMin, double); 00108 itkSetMacro(DistanceMax, double); 00109 itkSetMacro(Epsilon, double); 00110 itkSetMacro(Polarity, bool); 00111 00113 void GenerateInputRequestedRegion(); 00114 00116 void SetInput1(const SourceImageType * image1); 00117 void SetInput2(const BoundaryProfileImageType * image2); 00118 00119 00120 protected: 00121 BloxBoundaryProfileImageToBloxCoreAtomImageFilter(); 00122 virtual ~BloxBoundaryProfileImageToBloxCoreAtomImageFilter() {}; 00123 void PrintSelf(std::ostream& os, Indent indent) const; 00124 00126 void GenerateData(); 00127 00128 private: 00129 BloxBoundaryProfileImageToBloxCoreAtomImageFilter(const Self&); //purposely not implemented 00130 void operator=(const Self&); //purposely not implemented 00131 00133 BoundaryProfileImageConstPointer m_BoundaryProfileImagePtr; 00134 SourceImageConstPointer m_SourceImagePtr; 00135 OutputImagePointer m_OutputPtr; 00136 00140 double m_DistanceMin; 00141 double m_DistanceMax; 00142 double m_Epsilon; 00143 bool m_Polarity; 00144 bool m_IntensityFlag; 00145 unsigned int m_IntensityThreshold; 00146 bool m_CreateCoreAtom; 00147 int m_CoreAtomsCreated; 00148 }; 00149 00150 } // end namespace itk 00151 00152 #ifndef ITK_MANUAL_INSTANTIATION 00153 #include "itkBloxBoundaryProfileImageToBloxCoreAtomImageFilter.txx" 00154 #endif 00155 00156 #endif

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