itkGaussianDensityFunction.h

Go to the documentation of this file.

/*=========================================================================

  Program:   Insight Segmentation & Registration Toolkit
  Module:    $RCSfile: itkGaussianDensityFunction.h,v $
  Language:  C++
  Date:      $Date: 2003/09/10 14:29:45 $
  Version:   $Revision: 1.12 $

  Copyright (c) Insight Software Consortium. All rights reserved.
  See ITKCopyright.txt or http://www.itk.org/HTML/Copyright.htm for details.

     This software is distributed WITHOUT ANY WARRANTY; without even 
     the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
     PURPOSE.  See the above copyright notices for more information.

=========================================================================*/
#ifndef __itkGaussianDensityFunction_h
#define __itkGaussianDensityFunction_h

#include "vnl/vnl_vector.h"
#include "vnl/vnl_matrix.h"
#include "vnl/algo/vnl_matrix_inverse.h"
#include "vnl/algo/vnl_determinant.h"
#include "vnl/vnl_math.h"

#include "itkMatrix.h"
#include "itkDensityFunction.h"

namespace itk{ 
namespace Statistics{

template< class TMeasurementVector >
class ITK_EXPORT GaussianDensityFunction :
    public DensityFunction< TMeasurementVector >
{
public:
  typedef GaussianDensityFunction Self;
  typedef DensityFunction< TMeasurementVector > Superclass ;
  typedef SmartPointer<Self> Pointer;

  itkTypeMacro(GaussianDensityFunction, DensityFunction);
  itkNewMacro(Self);
  
  typedef TMeasurementVector MeasurementVectorType ;

  itkStaticConstMacro(VectorDimension, unsigned int,
                      TMeasurementVector::Length);

  typedef Vector< double, itkGetStaticConstMacro(VectorDimension) > MeanType ;
  
  typedef Matrix< double, itkGetStaticConstMacro(VectorDimension), 
                  itkGetStaticConstMacro(VectorDimension) > CovarianceType ;

  void SetMean(MeanType* mean)
  {
    if ( m_Mean != mean) 
      {
      m_Mean = mean ;
      this->Modified() ;
      }
  }
  
  MeanType* GetMean() const
  { return m_Mean ; }

  void SetCovariance(CovarianceType* cov); 
  
  CovarianceType* GetCovariance() const ;

  double Evaluate(const MeasurementVectorType &measurement) const ;
  
protected:
  GaussianDensityFunction(void) ;
  virtual ~GaussianDensityFunction(void) {}
  void PrintSelf(std::ostream& os, Indent indent) const;

private:
  MeanType* m_Mean;              // mean
  CovarianceType* m_Covariance;         // covariance matrix

  // inverse covariance matrix which is automatically calculated 
  // when covariace matirx is set.  This speed up the GetProbability()
  CovarianceType  m_InverseCovariance; 

  // pre_factor which is automatically calculated 
  // when covariace matirx is set.  This speeds up the GetProbability()  
  double m_PreFactor;

  bool m_IsCovarianceZero ;
};

} // end of namespace Statistics
} // end namespace itk

#ifndef ITK_MANUAL_INSTANTIATION
#include "itkGaussianDensityFunction.txx"
#endif

#endif

---