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itkMedialNodeTripletCorrespondenceProcess.h

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00001 /*========================================================================= 00002 00003 Program: Insight Segmentation & Registration Toolkit 00004 Module: $RCSfile: itkMedialNodeTripletCorrespondenceProcess.h,v $ 00005 Language: C++ 00006 Date: $Date: 2003/09/10 14:28:35 $ 00007 Version: $Revision: 1.2 $ 00008 00009 Copyright (c) Insight Software Consortium. All rights reserved. 00010 See ITKCopyright.txt or http://www.itk.org/HTML/Copyright.htm for details. 00011 00012 This software is distributed WITHOUT ANY WARRANTY; without even 00013 the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR 00014 PURPOSE. See the above copyright notices for more information. 00015 00016 =========================================================================*/ 00017 #ifndef __itkMedialNodeTripletCorrespondenceProcess_h 00018 #define __itkMedialNodeTripletCorrespondenceProcess_h 00019 00020 #include "itkImage.h" 00021 #include "itkProcessObject.h" 00022 #include "itkBloxCoreAtomImage.h" 00023 #include "itkBloxCoreAtomPixel.h" 00024 #include "itkMatrixResizeableDataObject.h" 00025 00026 #include "itkPNGImageIO.h" 00027 #include "itkImageFileWriter.h" 00028 #include "itkRawImageIO.h" 00029 00030 #include "itkCorrespondenceDataStructure.h" 00031 #include "itkCorrespondenceDataStructureIterator.h" 00032 00033 namespace itk 00034 { 00035 00044 template< typename TSourceImage > 00045 class MedialNodeTripletCorrespondenceProcess : public ProcessObject 00046 { 00047 public: 00048 00050 itkStaticConstMacro(NDimensions, unsigned int, TSourceImage::ImageDimension); 00051 00053 typedef MedialNodeTripletCorrespondenceProcess Self; 00054 typedef ProcessObject Superclass; 00055 typedef SmartPointer<Self> Pointer; 00056 typedef SmartPointer<const Self> ConstPointer; 00057 00059 typedef DataObject::Pointer DataObjectPointer; 00060 00062 itkNewMacro(Self); 00063 00065 itkTypeMacro(MedialNodeTripletCorrespondenceProcess, ProcessObject); 00066 00068 typedef TSourceImage CoreAtomImageType; 00069 typedef typename CoreAtomImageType::Pointer CoreAtomImagePointer; 00070 typedef typename CoreAtomImageType::RegionType CoreAtomImageRegionType; 00071 typedef typename CoreAtomImageType::PixelType CoreAtomImagePixelType; 00072 typedef typename CoreAtomImageType::ConstPointer CoreAtomImageConstPointer; 00073 00075 typedef CorrespondingMedialNodeClique<itkGetStaticConstMacro(NDimensions),2> InputNodeType; 00076 typedef CorrespondenceDataStructure<InputNodeType,2> InputDataStructureType; 00077 typedef typename CorrespondenceDataStructure<InputNodeType,2>::Pointer InputDataStructurePointerType; 00078 typedef CorrespondenceDataStructureIterator<InputDataStructureType> InputIteratorType; 00079 00081 typedef CorrespondingMedialNodeClique<itkGetStaticConstMacro(NDimensions),3> OutputNodeType; 00082 typedef CorrespondenceDataStructure<OutputNodeType,3> OutputDataStructureType; 00083 typedef typename CorrespondenceDataStructure<OutputNodeType,3>::Pointer OutputDataStructurePointerType; 00084 typedef CorrespondenceDataStructureIterator<OutputDataStructureType> OutputIteratorType; 00085 00087 typedef MatrixResizeableDataObject<double> DistanceMatrixType; 00088 typedef typename DistanceMatrixType::Pointer DistanceMatrixPointer; 00089 00091 OutputDataStructureType * GetOutput(void); 00092 OutputDataStructureType * GetOutput(unsigned int idx); 00093 00095 void SetPairDataStructure(const InputDataStructureType * InputDataStructure ); 00096 00098 void SetCoreAtomImageA( const CoreAtomImageType * CoreAtomImageA ); 00099 00101 void SetCoreAtomImageB( const CoreAtomImageType * CoreAtomImageB ); 00102 00104 void SetDistanceMatrixA( const DistanceMatrixType * DistanceMatrixA ); 00105 00107 void SetDistanceMatrixB( const DistanceMatrixType * DistanceMatrixB ); 00108 00110 virtual void Update() {this->GenerateData();} 00111 00112 virtual DataObjectPointer MakeOutput(unsigned int idx); 00113 00115 int GetNumberOfNodeTriplets() {return m_NumberOfTriplets;} 00116 int GetNumberOfNodeTripletBases() {return m_NumberOfNodeBaseTriplets;} 00117 00118 protected: 00119 00120 MedialNodeTripletCorrespondenceProcess(); 00121 virtual ~MedialNodeTripletCorrespondenceProcess(){} 00122 00123 void PrintSelf(std::ostream& os, Indent indent) const; 00124 00126 void GenerateData(); 00127 00129 TSourceImage * GetCoreAtomImageA(); 00130 TSourceImage * GetCoreAtomImageB(); 00131 00133 DistanceMatrixType * GetDistanceMatrixA(); 00134 DistanceMatrixType * GetDistanceMatrixB(); 00135 00136 private: 00137 MedialNodeTripletCorrespondenceProcess(const Self&); //purposely not implemented 00138 void operator=(const Self&); //purposely not implemented 00139 00140 CoreAtomImagePointer m_CoreAtomImageA; 00141 CoreAtomImagePointer m_CoreAtomImageB; 00142 00143 DistanceMatrixPointer m_DistanceMatrixA; 00144 DistanceMatrixPointer m_DistanceMatrixB; 00145 00146 InputDataStructurePointerType m_InputDataStructure; 00147 OutputDataStructurePointerType m_OutputDataStructure; 00148 00149 int m_NumberOfTriplets; 00150 int m_NumberOfNodeBaseTriplets; 00151 00152 bool m_CreateOutputFile; 00153 }; 00154 00155 } // end namespace itk 00156 00157 #ifndef ITK_MANUAL_INSTANTIATION 00158 #include "itkMedialNodeTripletCorrespondenceProcess.txx" 00159 #endif 00160 00161 #endif

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