itkPhilipsRECImageIO.h
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00033 #ifndef __itkPhilipsRECImageIO_h
00034 #define __itkPhilipsRECImageIO_h
00035
00036 #ifdef _MSC_VER
00037 #pragma warning ( disable : 4786 )
00038 #endif
00039
00040 #include "itkImageIOBase.h"
00041 #include "itkVectorContainer.h"
00042 #include "vnl/vnl_vector_fixed.h"
00043
00044 namespace itk
00045 {
00053 class ITK_EXPORT PhilipsRECImageIO : public ImageIOBase
00054 {
00055 public:
00057 typedef PhilipsRECImageIO Self;
00058 typedef ImageIOBase Superclass;
00059 typedef SmartPointer<Self> Pointer;
00060
00062 itkNewMacro(Self);
00063
00065 itkTypeMacro(PhilipsRECImageIO, Superclass);
00066
00068 typedef VectorContainer< unsigned int, double > EchoTimesContainerType;
00069 typedef VectorContainer< unsigned int, double > TriggerTimesContainerType;
00070 typedef VectorContainer< unsigned int, double > RepetitionTimesContainerType;
00071 typedef vnl_vector_fixed< int, 2 > ScanResolutionType;
00072 typedef vnl_vector_fixed< float, 3 > FOVType;
00073 typedef vnl_vector_fixed< double, 3 > AngulationMidSliceType;
00074 typedef vnl_vector_fixed< double, 3 > OffCentreMidSliceType;
00075 typedef vnl_vector_fixed< float, 3 > PhaseEncodingVelocityType;
00076
00083 typedef vnl_vector_fixed< int, 8 > ImageTypesType;
00084 typedef vnl_vector_fixed< int, 8 > ScanningSequencesType;
00085 typedef std::vector< int > SliceIndexType;
00086 typedef vnl_vector_fixed< double, 3 > ImageTypeRescaleValuesType;
00087
00088 typedef VectorContainer< unsigned int, ImageTypeRescaleValuesType >
00089 ImageTypeRescaleValuesContainerType;
00090 typedef ImageTypeRescaleValuesContainerType::Pointer
00091 ImageTypeRescaleValuesContainerTypePtr;
00092 typedef VectorContainer< unsigned int, ImageTypeRescaleValuesContainerTypePtr >
00093 ScanningSequenceImageTypeRescaleValuesContainerType;
00094 typedef double GradientBvalueType;
00095 typedef VectorContainer< unsigned int, GradientBvalueType >
00096 GradientBvalueContainerType;
00097 typedef vnl_vector_fixed< double, 3 >
00098 GradientDirectionType;
00099 typedef VectorContainer< unsigned int, GradientDirectionType >
00100 GradientDirectionContainerType;
00101
00102
00103
00109 virtual bool CanReadFile(const char* FileNameToRead);
00110
00112 virtual void ReadImageInformation();
00113
00115 virtual void Read(void* buffer);
00116
00117
00118
00125 virtual bool CanWriteFile( const char * itkNotUsed( FileNameToWrite ) )
00126 {
00127 return false;
00128 }
00129
00131 virtual void WriteImageInformation()
00132 {
00133 return;
00134 }
00135
00138 virtual void Write( const void * itkNotUsed(buffer) )
00139 {
00140 return;
00141 }
00142
00143 protected:
00144 PhilipsRECImageIO();
00145 ~PhilipsRECImageIO();
00146 void PrintSelf(std::ostream& os, Indent indent) const;
00147
00148 private:
00149
00150 PhilipsRECImageIO(const Self&);
00151 void operator=(const Self&);
00152 void SwapBytesIfNecessary(void * buffer, unsigned long numberOfPixels);
00153 int GetSliceIndex(int index);
00154
00155 SliceIndexType * m_SliceIndex;
00156 ImageIOBase::ByteOrder m_MachineByteOrder;
00157 };
00158
00159 extern const char *const PAR_Version;
00160 extern const char *const PAR_SliceOrientation;
00161 extern const char *const PAR_ExaminationName;
00162 extern const char *const PAR_ProtocolName;
00163 extern const char *const PAR_SeriesType;
00164 extern const char *const PAR_AcquisitionNr;
00165 extern const char *const PAR_ReconstructionNr;
00166 extern const char *const PAR_ScanDuration;
00167 extern const char *const PAR_MaxNumberOfCardiacPhases;
00168 extern const char *const PAR_TriggerTimes;
00169 extern const char *const PAR_MaxNumberOfEchoes;
00170 extern const char *const PAR_EchoTimes;
00171 extern const char *const PAR_MaxNumberOfDynamics;
00172 extern const char *const PAR_MaxNumberOfMixes;
00173 extern const char *const PAR_PatientPosition;
00174 extern const char *const PAR_PreparationDirection;
00175 extern const char *const PAR_Technique;
00176 extern const char *const PAR_ScanMode;
00177 extern const char *const PAR_NumberOfAverages;
00178 extern const char *const PAR_ScanResolution;
00179 extern const char *const PAR_RepetitionTimes;
00180 extern const char *const PAR_ScanPercentage;
00181 extern const char *const PAR_FOV;
00182 extern const char *const PAR_WaterFatShiftPixels;
00183 extern const char *const PAR_AngulationMidSlice;
00184 extern const char *const PAR_OffCentreMidSlice;
00185 extern const char *const PAR_FlowCompensation;
00186 extern const char *const PAR_Presaturation;
00187 extern const char *const PAR_CardiacFrequency;
00188 extern const char *const PAR_MinRRInterval;
00189 extern const char *const PAR_MaxRRInterval;
00190 extern const char *const PAR_PhaseEncodingVelocity;
00191 extern const char *const PAR_MTC;
00192 extern const char *const PAR_SPIR;
00193 extern const char *const PAR_EPIFactor;
00194 extern const char *const PAR_TurboFactor;
00195 extern const char *const PAR_DynamicScan;
00196 extern const char *const PAR_Diffusion;
00197 extern const char *const PAR_DiffusionEchoTime;
00198 extern const char *const PAR_MaxNumberOfDiffusionValues;
00199 extern const char *const PAR_GradientBValues;
00200 extern const char *const PAR_MaxNumberOfGradientOrients;
00201 extern const char *const PAR_GradientDirectionValues;
00202 extern const char *const PAR_InversionDelay;
00203 extern const char *const PAR_NumberOfImageTypes;
00204 extern const char *const PAR_ImageTypes;
00205 extern const char *const PAR_NumberOfScanningSequences;
00206 extern const char *const PAR_ScanningSequences;
00207 extern const char *const PAR_ScanningSequenceImageTypeRescaleValues;
00208
00209 }
00210
00211 #endif // __itkPhilipsRECImageIO_h
00212