itkMahalanobisDistanceThresholdImageFunction.h

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/*=========================================================================

  Program:   Insight Segmentation & Registration Toolkit
  Module:    $RCSfile: itkMahalanobisDistanceThresholdImageFunction.h,v $
  Language:  C++
  Date:      $Date: 2009-02-05 19:05:01 $
  Version:   $Revision: 1.7 $

  Copyright (c) Insight Software Consortium. All rights reserved.
  See ITKCopyright.txt or http://www.itk.org/HTML/Copyright.htm for details.

     This software is distributed WITHOUT ANY WARRANTY; without even 
     the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
     PURPOSE.  See the above copyright notices for more information.

=========================================================================*/
#ifndef __itkMahalanobisDistanceThresholdImageFunction_h
#define __itkMahalanobisDistanceThresholdImageFunction_h

#include "itkImageFunction.h"
#include "itkMahalanobisDistanceMembershipFunction.h"

namespace itk
{

template <class TInputImage, class TCoordRep = float>
class ITK_EXPORT MahalanobisDistanceThresholdImageFunction : 
  public ImageFunction<TInputImage,bool,TCoordRep> 
{
public:
  typedef MahalanobisDistanceThresholdImageFunction Self;
  typedef ImageFunction<TInputImage,bool,TCoordRep> Superclass;
  typedef SmartPointer<Self>                        Pointer;
  typedef SmartPointer<const Self>                  ConstPointer;

  itkTypeMacro(MahalanobisDistanceThresholdImageFunction, ImageFunction);

  itkNewMacro(Self);

  typedef typename Superclass::InputImageType InputImageType;

  typedef typename TInputImage::PixelType PixelType;

  itkStaticConstMacro(ImageDimension, unsigned int,Superclass::ImageDimension);

  typedef typename Superclass::PointType PointType;

  typedef typename Superclass::IndexType IndexType;

  typedef typename Superclass::ContinuousIndexType ContinuousIndexType;

  typedef vnl_matrix<double> CovarianceMatrixType;

  typedef vnl_vector<double> MeanVectorType;

  virtual bool Evaluate( const PointType& point ) const;

  virtual bool EvaluateAtContinuousIndex( 
                        const ContinuousIndexType & index ) const;

  virtual bool EvaluateAtIndex( const IndexType & index ) const;

  virtual double EvaluateDistance( const PointType& point ) const;

  virtual double EvaluateDistanceAtIndex( const IndexType & index ) const;

  itkGetConstReferenceMacro(Threshold,double);
  itkSetMacro(Threshold,double);

  void SetMean(const MeanVectorType &mean);
  const MeanVectorType & GetMean() const;

  void SetCovariance(const CovarianceMatrixType &cov); 
  const CovarianceMatrixType & GetCovariance() const;


protected:
  MahalanobisDistanceThresholdImageFunction();
  ~MahalanobisDistanceThresholdImageFunction(){};
  void PrintSelf(std::ostream& os, Indent indent) const;

private:
  MahalanobisDistanceThresholdImageFunction( const Self& ); //purposely not implemented
  void operator=( const Self& ); //purposely not implemented

  double  m_Threshold;

  // This is intended only for Image of Vector pixel type.
  typedef Statistics::MahalanobisDistanceMembershipFunction<
                                            PixelType 
                                              >  MahalanobisDistanceFunctionType;

  typedef typename MahalanobisDistanceFunctionType::Pointer MahalanobisDistanceFunctionPointer;
  MahalanobisDistanceFunctionPointer m_MahalanobisDistanceMembershipFunction;

};

} // end namespace itk

#ifndef ITK_MANUAL_INSTANTIATION
#include "itkMahalanobisDistanceThresholdImageFunction.txx"
#endif

#endif

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