itkMaskedMovingHistogramImageFilter.h

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/*=========================================================================

  Program:   Insight Segmentation & Registration Toolkit
  Module:    $RCSfile: itkMaskedMovingHistogramImageFilter.h,v $
  Language:  C++
  Date:      $Date: 2009-04-23 03:43:41 $
  Version:   $Revision: 1.3 $

  Copyright (c) Insight Software Consortium. All rights reserved.
  See ITKCopyright.txt or http://www.itk.org/HTML/Copyright.htm for details.

     This software is distributed WITHOUT ANY WARRANTY; without even 
     the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
     PURPOSE.  See the above copyright notices for more information.

=========================================================================*/
#ifndef __itkMaskedMovingHistogramImageFilter_h
#define __itkMaskedMovingHistogramImageFilter_h

#include "itkMovingHistogramImageFilterBase.h"
#include <list>
#include <map>
#include <set>

namespace itk {

template<class TInputImage, class TMaskImage, class TOutputImage, class TKernel, class THistogram >
class ITK_EXPORT MaskedMovingHistogramImageFilter : 
    public MovingHistogramImageFilterBase<TInputImage, TOutputImage, TKernel>
{
public:
  typedef MaskedMovingHistogramImageFilter           Self;
  typedef MovingHistogramImageFilterBase<TInputImage, TOutputImage, TKernel>
                                                     Superclass;
  typedef SmartPointer<Self>                         Pointer;
  typedef SmartPointer<const Self>                   ConstPointer;

  itkNewMacro(Self);  

  itkTypeMacro(MaskedMovingHistogramImageFilter, 
               MovingHistogramImageFilter);

  typedef TInputImage                                InputImageType;
  typedef TOutputImage                               OutputImageType;
  typedef TMaskImage                                 MaskImageType;
  typedef typename TInputImage::RegionType           RegionType;
  typedef typename TInputImage::SizeType             SizeType;
  typedef typename TInputImage::IndexType            IndexType;
  typedef typename TInputImage::PixelType            PixelType;
  typedef typename TInputImage::OffsetType           OffsetType;
  typedef typename Superclass::OutputImageRegionType OutputImageRegionType;
  typedef typename TOutputImage::PixelType           OutputPixelType;
  typedef typename TInputImage::PixelType            InputPixelType;
  typedef typename MaskImageType::PixelType          MaskPixelType;
  typedef THistogram                                 HistogramType;

  void SetMaskImage(MaskImageType *input)
    {
    // Process object is not const-correct so the const casting is required.
    this->SetNthInput( 1, const_cast<TMaskImage *>(input) );
    }

  MaskImageType * GetMaskImage()
    {
    return static_cast<MaskImageType*>(const_cast<DataObject *>(this->ProcessObject::GetInput(1)));
    }


  void SetInput1(InputImageType *input)
    {
    this->SetInput( input );
    }

  void SetInput2(MaskImageType *input)
    {
    this->SetMaskImage( input );
    }


  itkStaticConstMacro(ImageDimension, unsigned int,
                      TInputImage::ImageDimension);

  typedef TKernel KernelType;

  typedef typename KernelType::ConstIterator KernelIteratorType;

  typedef typename KernelType::SizeType RadiusType;

  typedef typename std::list< OffsetType > OffsetListType;

  typedef typename std::map< OffsetType, OffsetListType, typename Functor::OffsetLexicographicCompare<itkGetStaticConstMacro(ImageDimension)> > OffsetMapType;

  MaskImageType * GetOutputMask();

  void AllocateOutputs();

  DataObject::Pointer MakeOutput(unsigned int idx);

  itkSetMacro(FillValue, OutputPixelType);
  itkGetConstMacro(FillValue, OutputPixelType);

  itkSetMacro(MaskValue, MaskPixelType);
  itkGetConstMacro(MaskValue, MaskPixelType);

  itkSetMacro(BackgroundMaskValue, MaskPixelType);
  itkGetConstMacro(BackgroundMaskValue, MaskPixelType);

  void SetGenerateOutputMask( bool );
  itkGetConstMacro(GenerateOutputMask, bool);
//   itkBooleanMacro(GenerateOutputMask);

protected:
  MaskedMovingHistogramImageFilter();
  ~MaskedMovingHistogramImageFilter() {};

  void  ThreadedGenerateData (const OutputImageRegionType& 
                              outputRegionForThread,
                              int threadId);

  void PrintSelf(std::ostream& os, Indent indent) const;
  
  virtual THistogram * NewHistogram();

  void pushHistogram(HistogramType *histogram, 
                     const OffsetListType* addedList,
                     const OffsetListType* removedList,
                     const RegionType &inputRegion,
                     const RegionType &kernRegion,
                     const InputImageType* inputImage,
                     const MaskImageType *maskImage,
                     const IndexType currentIdx);

private:
  MaskedMovingHistogramImageFilter(const Self&); //purposely not implemented
  void operator=(const Self&); //purposely not implemented

  bool            m_GenerateOutputMask;

  OutputPixelType m_FillValue;

  MaskPixelType   m_MaskValue;

  MaskPixelType   m_BackgroundMaskValue;

}; // end of class

} // end namespace itk
  
#ifndef ITK_MANUAL_INSTANTIATION
#include "itkMaskedMovingHistogramImageFilter.txx"
#endif

#endif

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