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itkPCAShapeSignedDistanceFunction.h

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00001 /*=========================================================================
00002 
00003   Program:   Insight Segmentation & Registration Toolkit
00004   Module:    $RCSfile: itkPCAShapeSignedDistanceFunction.h,v $
00005   Language:  C++
00006   Date:      $Date: 2009-04-25 12:24:12 $
00007   Version:   $Revision: 1.11 $
00008 
00009   Copyright (c) Insight Software Consortium. All rights reserved.
00010   See ITKCopyright.txt or http://www.itk.org/HTML/Copyright.htm for details.
00011 
00012      This software is distributed WITHOUT ANY WARRANTY; without even 
00013      the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
00014      PURPOSE.  See the above copyright notices for more information.
00015 
00016 =========================================================================*/
00017 #ifndef __itkPCAShapeSignedDistanceFunction_h
00018 #define __itkPCAShapeSignedDistanceFunction_h
00019 
00020 #include "itkShapeSignedDistanceFunction.h"
00021 #include "itkImage.h"
00022 #include "itkInterpolateImageFunction.h"
00023 #include "itkExtrapolateImageFunction.h"
00024 #include "itkTransform.h"
00025 
00026 namespace itk
00027 {
00028 
00029 
00064 template< typename TCoordRep, 
00065           unsigned int VSpaceDimension,
00066           typename TImage = Image<double,VSpaceDimension> >
00067 class ITK_EXPORT PCAShapeSignedDistanceFunction : 
00068   public ShapeSignedDistanceFunction<TCoordRep, VSpaceDimension>
00069 {
00070 
00071 public:
00073   typedef PCAShapeSignedDistanceFunction          Self;
00074   typedef ShapeSignedDistanceFunction<
00075     TCoordRep, VSpaceDimension>                   Superclass;
00076   typedef SmartPointer<Self>                      Pointer;
00077   typedef SmartPointer<const Self>                ConstPointer;
00078 
00079 
00081   itkTypeMacro(PCAShapeSignedDistanceFunction, ShapeSignedDistancFunction);
00082 
00084   itkNewMacro(Self);
00085 
00087   itkStaticConstMacro(SpaceDimension,unsigned int,Superclass::SpaceDimension);
00088 
00089 
00091   typedef typename Superclass::CoordRepType       CoordRepType;
00092 
00094   typedef typename Superclass::InputType          InputType;
00095 
00097   typedef typename Superclass::OutputType         OutputType;
00098 
00100   typedef typename Superclass::PointType          PointType;
00101 
00103   typedef typename Superclass::ParametersType     ParametersType;
00104 
00105 
00107   typedef TImage                                  ImageType;
00108   typedef typename ImageType::Pointer             ImagePointer;
00109   typedef std::vector<ImagePointer>               ImagePointerVector;
00110 
00112   typedef Transform<CoordRepType, 
00113                     itkGetStaticConstMacro(SpaceDimension), 
00114                     itkGetStaticConstMacro(SpaceDimension)> TransformType;
00115 
00117   typedef InterpolateImageFunction<ImageType, CoordRepType> InterpolatorType;
00118   typedef typename InterpolatorType::Pointer                InterpolatorPointer;
00119   typedef std::vector<InterpolatorPointer>                  InterpolatorPointerVector;
00120 
00122   typedef ExtrapolateImageFunction<ImageType, CoordRepType> ExtrapolatorType;
00123   typedef typename ExtrapolatorType::Pointer                ExtrapolatorPointer;
00124   typedef std::vector<ExtrapolatorPointer>                  ExtrapolatorPointerVector;
00125 
00127   typedef ImageFunction<ImageType, double, CoordRepType> FunctionType;
00128   typedef typename FunctionType::Pointer                 FunctionPointer;
00129   typedef std::vector<FunctionPointer>                   FunctionPointerVector;
00130 
00131 
00134   void SetNumberOfPrincipalComponents(unsigned int n);
00135   itkGetConstMacro(NumberOfPrincipalComponents, unsigned int);
00137 
00139   itkSetObjectMacro(MeanImage, ImageType);
00140   itkGetObjectMacro(MeanImage, ImageType);
00142 
00144   void SetPrincipalComponentImages(ImagePointerVector v)
00145     { m_PrincipalComponentImages = v; }
00146 //  ImagePointerVector & GetPrincipalComponentImages()
00147 //    { return m_PrincipalComponentImages; }
00149 
00152   itkSetMacro(PrincipalComponentStandardDeviations, ParametersType);
00153   itkGetConstMacro(PrincipalComponentStandardDeviations, ParametersType);
00155 
00157   itkSetObjectMacro(Transform, TransformType);
00158   itkGetObjectMacro(Transform, TransformType);
00160 
00161 
00163   virtual void SetParameters( const ParametersType & );
00164   virtual unsigned int GetNumberOfShapeParameters(void) const
00165     { return m_NumberOfPrincipalComponents; }
00166   virtual unsigned int GetNumberOfPoseParameters(void) const
00167     { return m_Transform ? m_Transform->GetNumberOfParameters() : 0; }
00169 
00171   virtual OutputType Evaluate(const PointType& point) const;
00172 
00175   virtual void Initialize() throw ( ExceptionObject );
00176 
00177 
00178 protected:
00179   PCAShapeSignedDistanceFunction();
00180   ~PCAShapeSignedDistanceFunction(){};
00181 
00182   void PrintSelf(std::ostream& os, Indent indent) const;
00183 
00184 
00185 private:
00186   PCAShapeSignedDistanceFunction(const Self&); //purposely not implemented
00187   void operator=( const Self& ); //purposely not implemented
00188 
00189 
00191   unsigned int                  m_NumberOfPrincipalComponents;
00192   unsigned int                  m_NumberOfTransformParameters;
00193 
00194   ImagePointer                  m_MeanImage;
00195   ImagePointerVector            m_PrincipalComponentImages;
00196   ParametersType                m_PrincipalComponentStandardDeviations;
00197 
00199   typename TransformType::Pointer        m_Transform;
00200   InterpolatorPointerVector              m_Interpolators;
00201   ExtrapolatorPointerVector              m_Extrapolators;
00202   mutable FunctionPointerVector          m_Selectors;
00203 
00205   ParametersType                m_WeightOfPrincipalComponents;
00206   ParametersType                m_TransformParameters;
00207 
00208 };
00209 
00210 } // end namespace itk
00211 
00212 // Define instantiation macro for this template.
00213 #define ITK_TEMPLATE_PCAShapeSignedDistanceFunction(_, EXPORT, x, y) namespace itk { \
00214   _(3(class EXPORT PCAShapeSignedDistanceFunction< ITK_TEMPLATE_3 x >)) \
00215   namespace Templates { typedef PCAShapeSignedDistanceFunction< ITK_TEMPLATE_3 x > \
00216                                           PCAShapeSignedDistanceFunction##y; } \
00217   }
00218 
00219 #if ITK_TEMPLATE_EXPLICIT
00220 # include "Templates/itkPCAShapeSignedDistanceFunction+-.h"
00221 #endif
00222 
00223 #if ITK_TEMPLATE_TXX
00224 # include "itkPCAShapeSignedDistanceFunction.txx"
00225 #endif
00226 
00227 #endif
00228 

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