00001
00002
00003
00004
00005
00006
00007
00008
00009
00010
00011
00012
00013
00014
00015
00016
00017 #ifndef __itkImageIOBase_h
00018 #define __itkImageIOBase_h
00019
00020 #include "itkLightProcessObject.h"
00021 #include "itkObjectFactory.h"
00022 #include "itkIndent.h"
00023 #include "itkImageIORegion.h"
00024 #include "vnl/vnl_vector.h"
00025
00026 #include <string>
00027
00028 namespace itk
00029 {
00030
00058 class ITK_EXPORT ImageIOBase : public LightProcessObject
00059 {
00060 public:
00062 typedef ImageIOBase Self;
00063 typedef LightProcessObject Superclass;
00064 typedef SmartPointer<Self> Pointer;
00065
00067 itkTypeMacro(ImageIOBase, Superclass);
00068
00070 itkSetStringMacro(FileName);
00071 itkGetStringMacro(FileName);
00073
00078 class UnknownType {};
00079
00083 typedef enum {UNKNOWNPIXELTYPE,SCALAR,RGB,RGBA,OFFSET,VECTOR,
00084 POINT,COVARIANTVECTOR,SYMMETRICSECONDRANKTENSOR,
00085 DIFFUSIONTENSOR3D,COMPLEX,FIXEDARRAY} IOPixelType;
00086
00091 typedef enum {UNKNOWNCOMPONENTTYPE,UCHAR,CHAR,USHORT,SHORT,UINT,INT,
00092 ULONG,LONG, FLOAT,DOUBLE} IOComponentType;
00093
00097 void SetNumberOfDimensions(unsigned int);
00098 itkGetMacro(NumberOfDimensions, unsigned int);
00100
00104 virtual void SetDimensions(unsigned int i, unsigned int dim);
00105 virtual unsigned int GetDimensions(unsigned int i) const
00106 { return m_Dimensions[i]; }
00108
00111 virtual void SetOrigin(unsigned int i, double origin);
00112 virtual double GetOrigin(unsigned int i) const
00113 {
00114 return m_Origin[i];
00115 }
00117
00120 virtual void SetSpacing(unsigned int i, double spacing);
00121 virtual double GetSpacing(unsigned int i) const
00122 {
00123 return m_Spacing[i];
00124 }
00126
00129 virtual void SetDirection(unsigned int i, std::vector<double> &direction);
00130 virtual void SetDirection(unsigned int i, vnl_vector<double> &direction);
00131 virtual std::vector<double> GetDirection(unsigned int i) const
00132 {
00133 return m_Direction[i];
00134 }
00136
00143 itkSetMacro(IORegion, ImageIORegion);
00144 itkGetConstMacro(IORegion, ImageIORegion);
00146
00152 itkSetEnumMacro(PixelType, IOPixelType);
00153 itkGetEnumMacro(PixelType, IOPixelType);
00155
00162 virtual bool SetPixelTypeInfo(const std::type_info& ptype);
00163
00166 itkSetEnumMacro(ComponentType,IOComponentType);
00167 itkGetEnumMacro(ComponentType,IOComponentType);
00168 virtual const std::type_info& GetComponentTypeInfo() const;
00170
00175 itkSetMacro(NumberOfComponents,unsigned int);
00176 itkGetConstReferenceMacro(NumberOfComponents,unsigned int);
00178
00180 itkSetMacro(UseCompression,bool);
00181 itkGetConstReferenceMacro(UseCompression,bool);
00182 itkBooleanMacro(UseCompression);
00184
00186 itkSetMacro(UseStreamedReading,bool);
00187 itkGetConstReferenceMacro(UseStreamedReading,bool);
00188 itkBooleanMacro(UseStreamedReading);
00190
00192 itkSetMacro(UseStreamedWriting,bool);
00193 itkGetConstReferenceMacro(UseStreamedWriting,bool);
00194 itkBooleanMacro(UseStreamedWriting);
00196
00199 std::string GetComponentTypeAsString(IOComponentType) const;
00200
00203 std::string GetPixelTypeAsString(IOPixelType) const;
00204
00207 typedef enum {ASCII,Binary,TypeNotApplicable} FileType;
00208
00211 typedef enum {BigEndian,LittleEndian,OrderNotApplicable} ByteOrder;
00212
00215 itkSetEnumMacro(FileType,FileType);
00216 itkGetEnumMacro(FileType,FileType);
00217 void SetFileTypeToASCII()
00218 {
00219 this->SetFileType(ASCII);
00220 }
00221 void SetFileTypeToBinary()
00222 {
00223 this->SetFileType(Binary);
00224 }
00226
00238 itkSetEnumMacro(ByteOrder,ByteOrder);
00239 itkGetEnumMacro(ByteOrder,ByteOrder);
00240 void SetByteOrderToBigEndian()
00241 {
00242 this->SetByteOrder(BigEndian);
00243 }
00244 void SetByteOrderToLittleEndian()
00245 {
00246 this->SetByteOrder(LittleEndian);
00247 }
00249
00252 std::string GetFileTypeAsString(FileType) const;
00253
00256 std::string GetByteOrderAsString(ByteOrder) const;
00257
00259 typedef std::streamoff SizeType;
00260
00263 virtual SizeType GetPixelStride () const;
00264
00266 SizeType GetImageSizeInPixels() const;
00267
00269 SizeType GetImageSizeInBytes() const;
00270
00273 SizeType GetImageSizeInComponents() const;
00274
00275
00276
00279 virtual bool CanReadFile(const char*) = 0;
00280
00283 virtual bool CanStreamRead()
00284 {
00285 return false;
00286 }
00287
00290 virtual void ReadImageInformation() = 0;
00291
00293 virtual void Read(void* buffer) = 0;
00294
00295
00296
00297
00300 virtual bool CanWriteFile(const char*) = 0;
00301
00304 virtual bool CanStreamWrite()
00305 {
00306 return false;
00307 }
00308
00311 virtual void WriteImageInformation() = 0;
00312
00316 virtual void Write( const void* buffer) = 0;
00317
00318
00319
00325 virtual bool SupportsDimension(unsigned long dim)
00326 {
00327 return (dim == 2);
00328 }
00329
00334 virtual ImageIORegion
00335 GenerateStreamableReadRegionFromRequestedRegion( const ImageIORegion & requested ) const;
00336
00337
00338 protected:
00339 ImageIOBase();
00340 ~ImageIOBase();
00341 void PrintSelf(std::ostream& os, Indent indent) const;
00342
00344 IOPixelType m_PixelType;
00345
00348 IOComponentType m_ComponentType;
00349
00351 ByteOrder m_ByteOrder;
00352 FileType m_FileType;
00353
00355 bool m_Initialized;
00356
00358 std::string m_FileName;
00359
00362 unsigned int m_NumberOfComponents;
00363
00365 unsigned int m_NumberOfDimensions;
00366
00368 bool m_UseCompression;
00369
00371 bool m_UseStreamedReading;
00372
00374 bool m_UseStreamedWriting;
00375
00378 ImageIORegion m_IORegion;
00379
00381 std::vector<unsigned int> m_Dimensions;
00382
00385 std::vector<double> m_Spacing;
00386
00388 std::vector<double> m_Origin;
00389
00391 std::vector<std::vector<double> > m_Direction;
00392
00395 std::vector< SizeType > m_Strides;
00396
00398 virtual void Reset(const bool freeDynamic = true);
00399
00401 void Resize(const unsigned int numDimensions,
00402 const unsigned int* dimensions);
00403
00410 void ComputeStrides();
00411
00414 virtual unsigned int GetPixelSize() const;
00415
00420 virtual unsigned int GetComponentSize() const;
00421
00424 SizeType GetComponentStride() const;
00425
00428 SizeType GetRowStride () const;
00429
00432 SizeType GetSliceStride () const;
00433
00435 void WriteBufferAsASCII(std::ostream& os, const void *buffer,
00436 IOComponentType ctype,
00437 SizeType numberOfBytesToWrite);
00438
00440 void ReadBufferAsASCII(std::istream& os, void *buffer,
00441 IOComponentType ctype,
00442 SizeType numberOfBytesToBeRead);
00443
00445 bool ReadBufferAsBinary(std::istream& os, void *buffer, SizeType numberOfBytesToBeRead);
00446
00447
00448 private:
00449 ImageIOBase(const Self&);
00450 void operator=(const Self&);
00451
00452
00453 };
00454
00455 }
00456
00457 #endif // __itkImageIOBase_h
00458