Deformably register two images using a diffeomorphic demons algorithm. More...

#include <itkDiffeomorphicDemonsRegistrationFilter.h>

Inheritance diagram for itk::DiffeomorphicDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >:

Collaboration diagram for itk::DiffeomorphicDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >:

Public Types
typedef SmartPointer< const Self >	ConstPointer
typedef ESMDemonsRegistrationFunction < FixedImageType, MovingImageType, DisplacementFieldType >	DemonsRegistrationFunctionType
typedef Superclass::DisplacementFieldPointer	DisplacementFieldPointer
typedef Superclass::DisplacementFieldType	DisplacementFieldType
typedef Superclass::FiniteDifferenceFunctionType	FiniteDifferenceFunctionType
typedef Superclass::FixedImagePointer	FixedImagePointer
typedef Superclass::FixedImageType	FixedImageType
typedef DemonsRegistrationFunctionType::GradientType	GradientType
typedef Superclass::MovingImagePointer	MovingImagePointer
typedef Superclass::MovingImageType	MovingImageType
typedef SmartPointer< Self >	Pointer
typedef DiffeomorphicDemonsRegistrationFilter	Self
typedef PDEDeformableRegistrationFilter < TFixedImage, TMovingImage, TDisplacementField >	Superclass
typedef FiniteDifferenceFunctionType::TimeStepType	TimeStepType
Public Member Functions
virtual ::itk::LightObject::Pointer	CreateAnother (void) const
virtual double	GetIntensityDifferenceThreshold () const
virtual double	GetMaximumUpdateStepLength () const
virtual double	GetMetric () const
virtual const char *	GetNameOfClass () const
virtual const double &	GetRMSChange () const
virtual GradientType	GetUseGradientType () const
virtual void	SetIntensityDifferenceThreshold (double)
virtual void	SetMaximumUpdateStepLength (double)
virtual void	SetUseGradientType (GradientType gtype)

virtual void	SetUseFirstOrderExp (bool _arg)
virtual bool	GetUseFirstOrderExp () const
virtual void	UseFirstOrderExpOn ()
virtual void	UseFirstOrderExpOff ()
Static Public Member Functions
static Pointer	New ()
Static Public Attributes
static const unsigned int	ImageDimension = FixedImageType::ImageDimension
Protected Member Functions
virtual void	AllocateUpdateBuffer ()
virtual void	ApplyUpdate (const TimeStepType &dt)
	DiffeomorphicDemonsRegistrationFilter ()
virtual void	InitializeIteration ()
void	PrintSelf (std::ostream &os, Indent indent) const
	~DiffeomorphicDemonsRegistrationFilter ()
Private Types
typedef AdderType::Pointer	AdderPointer
typedef AddImageFilter < DisplacementFieldType, DisplacementFieldType, DisplacementFieldType >	AdderType
typedef FieldExponentiatorType::Pointer	FieldExponentiatorPointer
typedef ExponentialDisplacementFieldImageFilter < DisplacementFieldType, DisplacementFieldType >	FieldExponentiatorType
typedef FieldInterpolatorType::OutputType	FieldInterpolatorOutputType
typedef FieldInterpolatorType::Pointer	FieldInterpolatorPointer
typedef VectorLinearInterpolateNearestNeighborExtrapolateImageFunction < DisplacementFieldType, double >	FieldInterpolatorType
typedef MultiplyByConstantType::Pointer	MultiplyByConstantPointer
typedef MultiplyImageFilter < DisplacementFieldType, itk::Image< TimeStepType, ImageDimension > , DisplacementFieldType >	MultiplyByConstantType
typedef VectorWarperType::Pointer	VectorWarperPointer
typedef WarpVectorImageFilter < DisplacementFieldType, DisplacementFieldType, DisplacementFieldType >	VectorWarperType
Private Member Functions
	DiffeomorphicDemonsRegistrationFilter (const Self &)
const DemonsRegistrationFunctionType *	DownCastDifferenceFunctionType () const
DemonsRegistrationFunctionType *	DownCastDifferenceFunctionType ()
void	operator= (const Self &)
Private Attributes
AdderPointer	m_Adder
FieldExponentiatorPointer	m_Exponentiator
MultiplyByConstantPointer	m_Multiplier
bool	m_UseFirstOrderExp
VectorWarperPointer	m_Warper

Detailed Description

template<class TFixedImage, class TMovingImage, class TDisplacementField>
class itk::DiffeomorphicDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >

Deformably register two images using a diffeomorphic demons algorithm.

This class was contributed by Tom Vercauteren, INRIA & Mauna Kea Technologies, based on a variation of the DemonsRegistrationFilter. The basic modification is to use diffeomorphism exponentials.

See T. Vercauteren, X. Pennec, A. Perchant and N. Ayache, "Non-parametric Diffeomorphic Image Registration with the Demons Algorithm", Proc. of MICCAI 2007.

DiffeomorphicDemonsRegistrationFilter implements the demons deformable algorithm that register two images by computing the deformation field which will map a moving image onto a fixed image.

A deformation field is represented as a image whose pixel type is some vector type with at least N elements, where N is the dimension of the fixed image. The vector type must support element access via operator []. It is assumed that the vector elements behave like floating point scalars.

This class is templated over the fixed image type, moving image type and the deformation field type.

The input fixed and moving images are set via methods SetFixedImage and SetMovingImage respectively. An initial deformation field maybe set via SetInitialDisplacementField or SetInput. If no initial field is set, a zero field is used as the initial condition.

The output deformation field can be obtained via methods GetOutput or GetDisplacementField.

This class make use of the finite difference solver hierarchy. Update for each iteration is computed in DemonsRegistrationFunction.

Author:: Tom Vercauteren, INRIA & Mauna Kea Technologies

Warning:: This filter assumes that the fixed image type, moving image type and deformation field type all have the same number of dimensions.

This implementation was taken from the Insight Journal paper: http://hdl.handle.net/1926/510

See also:: DemonsRegistrationFilter; DemonsRegistrationFunction

Definition at line 78 of file itkDiffeomorphicDemonsRegistrationFilter.h.