ITK  4.2.0
Insight Segmentation and Registration Toolkit
itkBioGeneNetwork.h
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18 #ifndef __itkBioGeneNetwork_h
19 #define __itkBioGeneNetwork_h
20 
21 
22 #include "itkMacro.h"
23 
24 #include <vector>
25 
26 namespace itk
27 {
28 namespace bio
29 {
38 class ITK_EXPORT GeneNetwork
39 {
40 public:
41  typedef std::vector< float > ProteomeType;
42  typedef std::vector< float > DomainsType;
43 public:
44  GeneNetwork();
45  virtual ~GeneNetwork();
46 
47  void Copy(const GeneNetwork & genome);
48 
49 private:
50 
51  // This array contains the concentrations of each protein
52  // in the cell at a certain time.
54 
55  // This array contains the concentrations of domain affinities
56  // in the cell at a certain time. Since each protein may
57  // have multiple domains and each domain has affinities
58  // for standard domains in the regulatory section of genes,
59  // this array is indexed by the domains in the regulatory
60  // section. The final value on each entry indicates the
61  // probability of a domain to be bound during a certain time
62  // interval.
64 };
65 } // end namespace bio
66 } // end namespace itk
67 
68 #endif
69