itkDiffusionTensor3D.h

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/*=========================================================================
 *
 *  Copyright Insight Software Consortium
 *
 *  Licensed under the Apache License, Version 2.0 (the "License");
 *  you may not use this file except in compliance with the License.
 *  You may obtain a copy of the License at
 *
 *         http://www.apache.org/licenses/LICENSE-2.0.txt
 *
 *  Unless required by applicable law or agreed to in writing, software
 *  distributed under the License is distributed on an "AS IS" BASIS,
 *  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 *  See the License for the specific language governing permissions and
 *  limitations under the License.
 *
 *=========================================================================*/
#ifndef __itkDiffusionTensor3D_h
#define __itkDiffusionTensor3D_h

// Undefine an eventual DiffusionTensor3D macro
#ifdef DiffusionTensor3D
#undef DiffusionTensor3D
#endif

#include "itkSymmetricSecondRankTensor.h"

namespace itk
{
template< typename TComponent >
class DiffusionTensor3D:public SymmetricSecondRankTensor< TComponent, 3 >
{
public:
  typedef DiffusionTensor3D                          Self;
  typedef SymmetricSecondRankTensor< TComponent, 3 > Superclass;

  typedef typename Superclass::ValueType     ValueType;
  typedef typename Superclass::ComponentType ComponentType;
#if defined( __GNUC__ ) && !defined( __INTEL_COMPILER ) && ( __GNUC__ == 3 )
  typedef ComponentType ComponentArrayType[6];
#else
  typedef typename Superclass::ComponentArrayType ComponentArrayType;
#endif
  typedef typename Superclass::AccumulateValueType AccumulateValueType;
  typedef typename Superclass::RealValueType       RealValueType;

  typedef typename Superclass::EigenValuesArrayType   EigenValuesArrayType;
  typedef typename Superclass::EigenVectorsMatrixType EigenVectorsMatrixType;

  DiffusionTensor3D();

  DiffusionTensor3D(const Superclass & r);
  DiffusionTensor3D(const ComponentType & r);
  DiffusionTensor3D(const ComponentArrayType r);

  template< typename TCoordRepB >
  DiffusionTensor3D(const DiffusionTensor3D< TCoordRepB > & pa):
    SymmetricSecondRankTensor< TComponent, 3 >(pa) {}

  Self & operator=(const Superclass & r);

  Self & operator=(const ComponentType & r);

  Self & operator=(const ComponentArrayType r);

  template< typename TCoordRepB >
  Self & operator=(const DiffusionTensor3D< TCoordRepB > & pa)
  {
    SymmetricSecondRankTensor< TComponent, 3 >::operator=(pa);
    return *this;
  }

  AccumulateValueType GetTrace() const;

  RealValueType GetFractionalAnisotropy() const;

  RealValueType GetRelativeAnisotropy() const;

  RealValueType GetInnerScalarProduct() const;
};
} // end namespace itk
#include "itkNumericTraitsDiffusionTensor3DPixel.h"

// Define instantiation macro for this template.
#define ITK_TEMPLATE_DiffusionTensor3D(_, EXPORT, TypeX, TypeY)     \
  namespace itk                                                     \
  {                                                                 \
  _( 1 ( class EXPORT DiffusionTensor3D< ITK_TEMPLATE_1 TypeX > ) ) \
  namespace Templates                                               \
  {                                                                 \
  typedef DiffusionTensor3D< ITK_TEMPLATE_1 TypeX >                 \
  DiffusionTensor3D##TypeY;                                       \
  }                                                                 \
  }

#if ITK_TEMPLATE_EXPLICIT
#include "Templates/itkDiffusionTensor3D+-.h"
#endif

#if ITK_TEMPLATE_TXX
#include "itkDiffusionTensor3D.hxx"
#endif

#endif