SimpleITK  1.3.0.dev124
Public Types | Public Member Functions | Private Types | Private Member Functions | Private Attributes | Friends | List of all members
itk::simple::GrayscaleFillholeImageFilter Class Reference

Remove local minima not connected to the boundary of the image. More...

#include <sitkGrayscaleFillholeImageFilter.h>

+ Inheritance diagram for itk::simple::GrayscaleFillholeImageFilter:
+ Collaboration diagram for itk::simple::GrayscaleFillholeImageFilter:

Public Types

typedef BasicPixelIDTypeList PixelIDTypeList
 
typedef GrayscaleFillholeImageFilter Self
 
- Public Types inherited from itk::simple::ImageFilter< 1 >
typedef ImageFilter Self
 
- Public Types inherited from itk::simple::ProcessObject
typedef ProcessObject Self
 

Public Member Functions

Image Execute (const Image &image1)
 
Image Execute (const Image &image1, bool fullyConnected)
 
SelfFullyConnectedOff ()
 
SelfFullyConnectedOn ()
 
bool GetFullyConnected () const
 
std::string GetName () const
 
 GrayscaleFillholeImageFilter ()
 
SelfSetFullyConnected (bool FullyConnected)
 
std::string ToString () const
 
virtual ~GrayscaleFillholeImageFilter ()
 
- Public Member Functions inherited from itk::simple::ImageFilter< 1 >
 ImageFilter ()
 
virtual ~ImageFilter ()=0
 
- Public Member Functions inherited from itk::simple::ProcessObject
virtual void Abort ()
 
virtual int AddCommand (itk::simple::EventEnum event, itk::simple::Command &cmd)
 Add a Command Object to observer the event. More...
 
virtual float GetProgress () const
 An Active Measurement of the progress of execution. More...
 
virtual bool HasCommand (itk::simple::EventEnum event) const
 Query of this object has any registered commands for event. More...
 
 ProcessObject ()
 
virtual void RemoveAllCommands ()
 Remove all registered commands. More...
 
virtual ~ProcessObject ()
 
virtual void DebugOn ()
 
virtual void DebugOff ()
 
virtual bool GetDebug () const
 
virtual void SetDebug (bool debugFlag)
 
virtual void SetNumberOfThreads (unsigned int n)
 
virtual unsigned int GetNumberOfThreads () const
 

Private Types

typedef Image(Self::* MemberFunctionType) (const Image &image1)
 

Private Member Functions

template<class TImageType >
Image ExecuteInternal (const Image &image1)
 

Private Attributes

bool m_FullyConnected
 
nsstd::auto_ptr< detail::MemberFunctionFactory< MemberFunctionType > > m_MemberFactory
 

Friends

struct detail::MemberFunctionAddressor< MemberFunctionType >
 

Additional Inherited Members

- Static Public Member Functions inherited from itk::simple::ProcessObject
static bool GetGlobalDefaultDebug ()
 
static void GlobalDefaultDebugOff ()
 
static void GlobalDefaultDebugOn ()
 
static void SetGlobalDefaultDebug (bool debugFlag)
 
static void GlobalWarningDisplayOn ()
 
static void GlobalWarningDisplayOff ()
 
static void SetGlobalWarningDisplay (bool flag)
 
static bool GetGlobalWarningDisplay ()
 
static void SetGlobalDefaultNumberOfThreads (unsigned int n)
 
static unsigned int GetGlobalDefaultNumberOfThreads ()
 
static double GetGlobalDefaultCoordinateTolerance ()
 Access the global tolerance to determine congruent spaces. More...
 
static void SetGlobalDefaultCoordinateTolerance (double)
 Access the global tolerance to determine congruent spaces. More...
 
static double GetGlobalDefaultDirectionTolerance ()
 Access the global tolerance to determine congruent spaces. More...
 
static void SetGlobalDefaultDirectionTolerance (double)
 Access the global tolerance to determine congruent spaces. More...
 
- Protected Member Functions inherited from itk::simple::ProcessObject
virtual unsigned long AddITKObserver (const itk::EventObject &, itk::Command *)
 
virtual itk::ProcessObjectGetActiveProcess ()
 
virtual void OnActiveProcessDelete ()
 
virtual void onCommandDelete (const itk::simple::Command *cmd) SITK_NOEXCEPT
 
virtual void PreUpdate (itk::ProcessObject *p)
 
virtual void RemoveITKObserver (EventCommand &e)
 
- Protected Member Functions inherited from itk::simple::NonCopyable
 NonCopyable ()
 
- Static Protected Member Functions inherited from itk::simple::ImageFilter< 1 >
static void FixNonZeroIndex (TImageType *img)
 
- Static Protected Member Functions inherited from itk::simple::ProcessObject
template<class TImageType >
static TImageType::ConstPointer CastImageToITK (const Image &img)
 
template<class TImageType >
static Image CastITKToImage (TImageType *img)
 
template<class TPixelType , unsigned int VImageDimension, unsigned int VLength, template< typename, unsigned int > class TVector>
static Image CastITKToImage (itk::Image< TVector< TPixelType, VLength >, VImageDimension > *img)
 
static const itk::EventObjectGetITKEventObject (EventEnum e)
 
template<typename T >
static std::ostream & ToStringHelper (std::ostream &os, const T &v)
 
static std::ostream & ToStringHelper (std::ostream &os, const char &v)
 
static std::ostream & ToStringHelper (std::ostream &os, const signed char &v)
 
static std::ostream & ToStringHelper (std::ostream &os, const unsigned char &v)
 

Detailed Description

Remove local minima not connected to the boundary of the image.

GrayscaleFillholeImageFilter fills holes in a grayscale image. Holes are local minima in the grayscale topography that are not connected to boundaries of the image. Gray level values adjacent to a hole are extrapolated across the hole.

This filter is used to smooth over local minima without affecting the values of local maxima. If you take the difference between the output of this filter and the original image (and perhaps threshold the difference above a small value), you'll obtain a map of the local minima.

This filter uses the ReconstructionByErosionImageFilter . It provides its own input as the "mask" input to the geodesic erosion. The "marker" image for the geodesic erosion is constructed such that boundary pixels match the boundary pixels of the input image and the interior pixels are set to the maximum pixel value in the input image.

Geodesic morphology and the Fillhole algorithm is described in Chapter 6 of Pierre Soille's book "Morphological Image Analysis: Principles and Applications", Second Edition, Springer, 2003.

See also
ReconstructionByErosionImageFilter
MorphologyImageFilter , GrayscaleErodeImageFilter , GrayscaleFunctionErodeImageFilter , BinaryErodeImageFilter
itk::simple::GrayscaleFillhole for the procedural interface
itk::GrayscaleFillholeImageFilter for the Doxygen on the original ITK class.

Definition at line 53 of file sitkGrayscaleFillholeImageFilter.h.

Member Typedef Documentation

typedef Image(Self::* itk::simple::GrayscaleFillholeImageFilter::MemberFunctionType) (const Image &image1)
private

Setup for member function dispatching

Definition at line 100 of file sitkGrayscaleFillholeImageFilter.h.

Define the pixels types supported by this filter

Definition at line 65 of file sitkGrayscaleFillholeImageFilter.h.

Definition at line 55 of file sitkGrayscaleFillholeImageFilter.h.

Constructor & Destructor Documentation

virtual itk::simple::GrayscaleFillholeImageFilter::~GrayscaleFillholeImageFilter ( )
virtual

Destructor

itk::simple::GrayscaleFillholeImageFilter::GrayscaleFillholeImageFilter ( )

Default Constructor that takes no arguments and initializes default parameters

Member Function Documentation

Image itk::simple::GrayscaleFillholeImageFilter::Execute ( const Image image1)

Execute the filter on the input image

Image itk::simple::GrayscaleFillholeImageFilter::Execute ( const Image image1,
bool  fullyConnected 
)

Execute the filter on the input image with the given parameters

template<class TImageType >
Image itk::simple::GrayscaleFillholeImageFilter::ExecuteInternal ( const Image image1)
private
Self& itk::simple::GrayscaleFillholeImageFilter::FullyConnectedOff ( )
inline

Definition at line 76 of file sitkGrayscaleFillholeImageFilter.h.

Self& itk::simple::GrayscaleFillholeImageFilter::FullyConnectedOn ( )
inline

Set the value of FullyConnected to true or false respectfully.

Definition at line 75 of file sitkGrayscaleFillholeImageFilter.h.

bool itk::simple::GrayscaleFillholeImageFilter::GetFullyConnected ( ) const
inline

Set/Get whether the connected components are defined strictly by face connectivity or by face+edge+vertex connectivity. Default is FullyConnectedOff. For objects that are 1 pixel wide, use FullyConnectedOn.

Definition at line 81 of file sitkGrayscaleFillholeImageFilter.h.

std::string itk::simple::GrayscaleFillholeImageFilter::GetName ( ) const
inlinevirtual

Name of this class

Implements itk::simple::ProcessObject.

Definition at line 83 of file sitkGrayscaleFillholeImageFilter.h.

Self& itk::simple::GrayscaleFillholeImageFilter::SetFullyConnected ( bool  FullyConnected)
inline

Set/Get whether the connected components are defined strictly by face connectivity or by face+edge+vertex connectivity. Default is FullyConnectedOff. For objects that are 1 pixel wide, use FullyConnectedOn.

Definition at line 72 of file sitkGrayscaleFillholeImageFilter.h.

std::string itk::simple::GrayscaleFillholeImageFilter::ToString ( ) const
virtual

Print ourselves out

Reimplemented from itk::simple::ProcessObject.

Friends And Related Function Documentation

Definition at line 104 of file sitkGrayscaleFillholeImageFilter.h.

Member Data Documentation

bool itk::simple::GrayscaleFillholeImageFilter::m_FullyConnected
private

Definition at line 110 of file sitkGrayscaleFillholeImageFilter.h.

nsstd::auto_ptr<detail::MemberFunctionFactory<MemberFunctionType> > itk::simple::GrayscaleFillholeImageFilter::m_MemberFactory
private

Definition at line 106 of file sitkGrayscaleFillholeImageFilter.h.


The documentation for this class was generated from the following file: