SimpleITK  1.3.0.dev466
Public Types | Public Member Functions | Private Types | Private Member Functions | Private Attributes | Friends | List of all members
itk::simple::NeighborhoodConnectedImageFilter Class Reference

Label pixels that are connected to a seed and lie within a neighborhood. More...

#include <sitkNeighborhoodConnectedImageFilter.h>

+ Inheritance diagram for itk::simple::NeighborhoodConnectedImageFilter:
+ Collaboration diagram for itk::simple::NeighborhoodConnectedImageFilter:

Public Types

typedef BasicPixelIDTypeList PixelIDTypeList
 
typedef NeighborhoodConnectedImageFilter Self
 
- Public Types inherited from itk::simple::ImageFilter< 1 >
typedef ImageFilter Self
 
- Public Types inherited from itk::simple::ProcessObject
typedef ProcessObject Self
 

Public Member Functions

SelfAddSeed (const std::vector< unsigned int > &idx)
 
SelfClearSeeds ()
 
Image Execute (const Image &image1)
 
Image Execute (const Image &image1, const std::vector< std::vector< unsigned int > > &seedList, double lower, double upper, const std::vector< unsigned int > &radius, double replaceValue)
 
double GetLower () const
 
std::string GetName () const
 
std::vector< unsigned int > GetRadius () const
 
double GetReplaceValue () const
 
std::vector< std::vector< unsigned int > > GetSeedList () const
 
double GetUpper () const
 
 NeighborhoodConnectedImageFilter ()
 
SelfSetLower (double Lower)
 
SelfSetRadius (const std::vector< unsigned int > &Radius)
 
SelfSetRadius (unsigned int value)
 
SelfSetReplaceValue (double ReplaceValue)
 
SelfSetSeed (const std::vector< unsigned int > &idx)
 
SelfSetSeedList (const std::vector< std::vector< unsigned int > > &t)
 
SelfSetUpper (double Upper)
 
std::string ToString () const
 
virtual ~NeighborhoodConnectedImageFilter ()
 
- Public Member Functions inherited from itk::simple::ImageFilter< 1 >
 ImageFilter ()
 
virtual ~ImageFilter ()=0
 
- Public Member Functions inherited from itk::simple::ProcessObject
virtual void Abort ()
 
virtual int AddCommand (itk::simple::EventEnum event, itk::simple::Command &cmd)
 Add a Command Object to observer the event. More...
 
virtual float GetProgress () const
 An Active Measurement of the progress of execution. More...
 
virtual bool HasCommand (itk::simple::EventEnum event) const
 Query of this object has any registered commands for event. More...
 
 ProcessObject ()
 
virtual void RemoveAllCommands ()
 Remove all registered commands. More...
 
virtual ~ProcessObject ()
 
virtual void DebugOn ()
 
virtual void DebugOff ()
 
virtual bool GetDebug () const
 
virtual void SetDebug (bool debugFlag)
 
virtual void SetNumberOfThreads (unsigned int n)
 
virtual unsigned int GetNumberOfThreads () const
 

Private Types

typedef Image(Self::* MemberFunctionType) (const Image &image1)
 

Private Member Functions

template<class TImageType >
Image ExecuteInternal (const Image &image1)
 

Private Attributes

double m_Lower
 
nsstd::auto_ptr< detail::MemberFunctionFactory< MemberFunctionType > > m_MemberFactory
 
std::vector< unsigned int > m_Radius
 
double m_ReplaceValue
 
std::vector< std::vector< unsigned int > > m_SeedList
 
double m_Upper
 

Friends

struct detail::MemberFunctionAddressor< MemberFunctionType >
 

Additional Inherited Members

- Static Public Member Functions inherited from itk::simple::ProcessObject
static bool GetGlobalDefaultDebug ()
 
static void GlobalDefaultDebugOff ()
 
static void GlobalDefaultDebugOn ()
 
static void SetGlobalDefaultDebug (bool debugFlag)
 
static void GlobalWarningDisplayOn ()
 
static void GlobalWarningDisplayOff ()
 
static void SetGlobalWarningDisplay (bool flag)
 
static bool GetGlobalWarningDisplay ()
 
static void SetGlobalDefaultNumberOfThreads (unsigned int n)
 
static unsigned int GetGlobalDefaultNumberOfThreads ()
 
static double GetGlobalDefaultCoordinateTolerance ()
 Access the global tolerance to determine congruent spaces. More...
 
static void SetGlobalDefaultCoordinateTolerance (double)
 Access the global tolerance to determine congruent spaces. More...
 
static double GetGlobalDefaultDirectionTolerance ()
 Access the global tolerance to determine congruent spaces. More...
 
static void SetGlobalDefaultDirectionTolerance (double)
 Access the global tolerance to determine congruent spaces. More...
 
- Protected Member Functions inherited from itk::simple::ProcessObject
virtual unsigned long AddITKObserver (const itk::EventObject &, itk::Command *)
 
virtual itk::ProcessObjectGetActiveProcess ()
 
virtual void OnActiveProcessDelete ()
 
virtual void onCommandDelete (const itk::simple::Command *cmd) SITK_NOEXCEPT
 
virtual void PreUpdate (itk::ProcessObject *p)
 
virtual void RemoveITKObserver (EventCommand &e)
 
- Protected Member Functions inherited from itk::simple::NonCopyable
 NonCopyable ()
 
- Static Protected Member Functions inherited from itk::simple::ImageFilter< 1 >
static void FixNonZeroIndex (TImageType *img)
 
- Static Protected Member Functions inherited from itk::simple::ProcessObject
template<class TImageType >
static TImageType::ConstPointer CastImageToITK (const Image &img)
 
template<class TImageType >
static Image CastITKToImage (TImageType *img)
 
template<class TPixelType , unsigned int VImageDimension, unsigned int VLength, template< typename, unsigned int > class TVector>
static Image CastITKToImage (itk::Image< TVector< TPixelType, VLength >, VImageDimension > *img)
 
static const itk::EventObjectGetITKEventObject (EventEnum e)
 
template<typename T >
static std::ostream & ToStringHelper (std::ostream &os, const T &v)
 
static std::ostream & ToStringHelper (std::ostream &os, const char &v)
 
static std::ostream & ToStringHelper (std::ostream &os, const signed char &v)
 
static std::ostream & ToStringHelper (std::ostream &os, const unsigned char &v)
 

Detailed Description

Label pixels that are connected to a seed and lie within a neighborhood.

NeighborhoodConnectedImageFilter labels pixels with ReplaceValue that are connected to an initial Seed AND whose neighbors all lie within a Lower and Upper threshold range.

See also
itk::simple::NeighborhoodConnected for the procedural interface
itk::NeighborhoodConnectedImageFilter for the Doxygen on the original ITK class.
Examples:
Segmentation/NeighborhoodConnectedImageFilter.cxx.

Definition at line 42 of file sitkNeighborhoodConnectedImageFilter.h.

Member Typedef Documentation

typedef Image(Self::* itk::simple::NeighborhoodConnectedImageFilter::MemberFunctionType) (const Image &image1)
private

Setup for member function dispatching

Definition at line 153 of file sitkNeighborhoodConnectedImageFilter.h.

Define the pixels types supported by this filter

Definition at line 54 of file sitkNeighborhoodConnectedImageFilter.h.

Definition at line 44 of file sitkNeighborhoodConnectedImageFilter.h.

Constructor & Destructor Documentation

virtual itk::simple::NeighborhoodConnectedImageFilter::~NeighborhoodConnectedImageFilter ( )
virtual

Destructor

itk::simple::NeighborhoodConnectedImageFilter::NeighborhoodConnectedImageFilter ( )

Default Constructor that takes no arguments and initializes default parameters

Member Function Documentation

Self& itk::simple::NeighborhoodConnectedImageFilter::AddSeed ( const std::vector< unsigned int > &  idx)
inline

AddSeed - Add a seed to the end of the list

Examples:
Segmentation/NeighborhoodConnectedImageFilter.cxx.

Definition at line 129 of file sitkNeighborhoodConnectedImageFilter.h.

Self& itk::simple::NeighborhoodConnectedImageFilter::ClearSeeds ( )
inline

ClearSeeds - Clear out all seeds in the list

Definition at line 114 of file sitkNeighborhoodConnectedImageFilter.h.

Image itk::simple::NeighborhoodConnectedImageFilter::Execute ( const Image image1)

Execute the filter on the input image

Examples:
Segmentation/NeighborhoodConnectedImageFilter.cxx.
Image itk::simple::NeighborhoodConnectedImageFilter::Execute ( const Image image1,
const std::vector< std::vector< unsigned int > > &  seedList,
double  lower,
double  upper,
const std::vector< unsigned int > &  radius,
double  replaceValue 
)

Execute the filter on the input image with the given parameters

template<class TImageType >
Image itk::simple::NeighborhoodConnectedImageFilter::ExecuteInternal ( const Image image1)
private
double itk::simple::NeighborhoodConnectedImageFilter::GetLower ( ) const
inline

Set/Get the lower threshold. The default is 0.

Definition at line 66 of file sitkNeighborhoodConnectedImageFilter.h.

std::string itk::simple::NeighborhoodConnectedImageFilter::GetName ( ) const
inlinevirtual

Name of this class

Implements itk::simple::ProcessObject.

Definition at line 136 of file sitkNeighborhoodConnectedImageFilter.h.

std::vector<unsigned int> itk::simple::NeighborhoodConnectedImageFilter::GetRadius ( ) const
inline

Get the radius of the neighborhood used to compute the median

Definition at line 90 of file sitkNeighborhoodConnectedImageFilter.h.

double itk::simple::NeighborhoodConnectedImageFilter::GetReplaceValue ( ) const
inline

Set/Get value to replace thresholded pixels. Pixels that lie * within Lower and Upper (inclusive) will be replaced with this value. The default is 1.

Definition at line 100 of file sitkNeighborhoodConnectedImageFilter.h.

std::vector< std::vector<unsigned int> > itk::simple::NeighborhoodConnectedImageFilter::GetSeedList ( ) const
inline

Get SeedList

Definition at line 108 of file sitkNeighborhoodConnectedImageFilter.h.

double itk::simple::NeighborhoodConnectedImageFilter::GetUpper ( ) const
inline

Set/Get the upper threshold. The default is the largest possible value for the InputPixelType.

Definition at line 76 of file sitkNeighborhoodConnectedImageFilter.h.

Self& itk::simple::NeighborhoodConnectedImageFilter::SetLower ( double  Lower)
inline

Set/Get the lower threshold. The default is 0.

Examples:
Segmentation/NeighborhoodConnectedImageFilter.cxx.

Definition at line 61 of file sitkNeighborhoodConnectedImageFilter.h.

Self& itk::simple::NeighborhoodConnectedImageFilter::SetRadius ( const std::vector< unsigned int > &  Radius)
inline

Set the radius of the neighborhood used for a mask.

Examples:
Segmentation/NeighborhoodConnectedImageFilter.cxx.

Definition at line 81 of file sitkNeighborhoodConnectedImageFilter.h.

Self& itk::simple::NeighborhoodConnectedImageFilter::SetRadius ( unsigned int  value)
inline

Set the values of the Radius vector all to value

Definition at line 84 of file sitkNeighborhoodConnectedImageFilter.h.

Self& itk::simple::NeighborhoodConnectedImageFilter::SetReplaceValue ( double  ReplaceValue)
inline

Set/Get value to replace thresholded pixels. Pixels that lie * within Lower and Upper (inclusive) will be replaced with this value. The default is 1.

Examples:
Segmentation/NeighborhoodConnectedImageFilter.cxx.

Definition at line 95 of file sitkNeighborhoodConnectedImageFilter.h.

Self& itk::simple::NeighborhoodConnectedImageFilter::SetSeed ( const std::vector< unsigned int > &  idx)
inline

SetSeed - Set list to a single seed

Definition at line 121 of file sitkNeighborhoodConnectedImageFilter.h.

Self& itk::simple::NeighborhoodConnectedImageFilter::SetSeedList ( const std::vector< std::vector< unsigned int > > &  t)
inline

Set SeedList

Definition at line 102 of file sitkNeighborhoodConnectedImageFilter.h.

Self& itk::simple::NeighborhoodConnectedImageFilter::SetUpper ( double  Upper)
inline

Set/Get the upper threshold. The default is the largest possible value for the InputPixelType.

Examples:
Segmentation/NeighborhoodConnectedImageFilter.cxx.

Definition at line 71 of file sitkNeighborhoodConnectedImageFilter.h.

std::string itk::simple::NeighborhoodConnectedImageFilter::ToString ( ) const
virtual

Print ourselves out

Reimplemented from itk::simple::ProcessObject.

Friends And Related Function Documentation

Definition at line 157 of file sitkNeighborhoodConnectedImageFilter.h.

Member Data Documentation

double itk::simple::NeighborhoodConnectedImageFilter::m_Lower
private

Definition at line 162 of file sitkNeighborhoodConnectedImageFilter.h.

nsstd::auto_ptr<detail::MemberFunctionFactory<MemberFunctionType> > itk::simple::NeighborhoodConnectedImageFilter::m_MemberFactory
private

Definition at line 159 of file sitkNeighborhoodConnectedImageFilter.h.

std::vector<unsigned int> itk::simple::NeighborhoodConnectedImageFilter::m_Radius
private

Definition at line 165 of file sitkNeighborhoodConnectedImageFilter.h.

double itk::simple::NeighborhoodConnectedImageFilter::m_ReplaceValue
private

Definition at line 168 of file sitkNeighborhoodConnectedImageFilter.h.

std::vector< std::vector<unsigned int> > itk::simple::NeighborhoodConnectedImageFilter::m_SeedList
private

List of interor seed points used to initialize the region growing segmentation

Definition at line 171 of file sitkNeighborhoodConnectedImageFilter.h.

double itk::simple::NeighborhoodConnectedImageFilter::m_Upper
private

Definition at line 163 of file sitkNeighborhoodConnectedImageFilter.h.


The documentation for this class was generated from the following file: