SimpleITK  1.3.0.dev466
Public Types | Public Member Functions | Private Types | Private Member Functions | Private Attributes | Friends | List of all members
itk::simple::VotingBinaryIterativeHoleFillingImageFilter Class Reference

Fills in holes and cavities by iteratively applying a voting operation. More...

#include <sitkVotingBinaryIterativeHoleFillingImageFilter.h>

+ Inheritance diagram for itk::simple::VotingBinaryIterativeHoleFillingImageFilter:
+ Collaboration diagram for itk::simple::VotingBinaryIterativeHoleFillingImageFilter:

Public Types

typedef IntegerPixelIDTypeList PixelIDTypeList
 
typedef VotingBinaryIterativeHoleFillingImageFilter Self
 
- Public Types inherited from itk::simple::ImageFilter< 1 >
typedef ImageFilter Self
 
- Public Types inherited from itk::simple::ProcessObject
typedef ProcessObject Self
 

Public Member Functions

Image Execute (const Image &image1)
 
Image Execute (const Image &image1, const std::vector< unsigned int > &radius, unsigned int maximumNumberOfIterations, unsigned int majorityThreshold, double foregroundValue, double backgroundValue)
 
double GetBackgroundValue () const
 
double GetForegroundValue () const
 
unsigned int GetMajorityThreshold () const
 
unsigned int GetMaximumNumberOfIterations () const
 
std::string GetName () const
 
std::vector< unsigned int > GetRadius () const
 
SelfSetBackgroundValue (double BackgroundValue)
 
SelfSetForegroundValue (double ForegroundValue)
 
SelfSetMajorityThreshold (unsigned int MajorityThreshold)
 
SelfSetMaximumNumberOfIterations (unsigned int MaximumNumberOfIterations)
 
SelfSetRadius (const std::vector< unsigned int > &Radius)
 
SelfSetRadius (unsigned int value)
 
std::string ToString () const
 
 VotingBinaryIterativeHoleFillingImageFilter ()
 
virtual ~VotingBinaryIterativeHoleFillingImageFilter ()
 
- Public Member Functions inherited from itk::simple::ImageFilter< 1 >
 ImageFilter ()
 
virtual ~ImageFilter ()=0
 
- Public Member Functions inherited from itk::simple::ProcessObject
virtual void Abort ()
 
virtual int AddCommand (itk::simple::EventEnum event, itk::simple::Command &cmd)
 Add a Command Object to observer the event. More...
 
virtual float GetProgress () const
 An Active Measurement of the progress of execution. More...
 
virtual bool HasCommand (itk::simple::EventEnum event) const
 Query of this object has any registered commands for event. More...
 
 ProcessObject ()
 
virtual void RemoveAllCommands ()
 Remove all registered commands. More...
 
virtual ~ProcessObject ()
 
virtual void DebugOn ()
 
virtual void DebugOff ()
 
virtual bool GetDebug () const
 
virtual void SetDebug (bool debugFlag)
 
virtual void SetNumberOfThreads (unsigned int n)
 
virtual unsigned int GetNumberOfThreads () const
 

Private Types

typedef Image(Self::* MemberFunctionType) (const Image &image1)
 

Private Member Functions

template<class TImageType >
Image ExecuteInternal (const Image &image1)
 

Private Attributes

double m_BackgroundValue
 
double m_ForegroundValue
 
unsigned int m_MajorityThreshold
 
unsigned int m_MaximumNumberOfIterations
 
nsstd::auto_ptr< detail::MemberFunctionFactory< MemberFunctionType > > m_MemberFactory
 
std::vector< unsigned int > m_Radius
 

Friends

struct detail::MemberFunctionAddressor< MemberFunctionType >
 

Additional Inherited Members

- Static Public Member Functions inherited from itk::simple::ProcessObject
static bool GetGlobalDefaultDebug ()
 
static void GlobalDefaultDebugOff ()
 
static void GlobalDefaultDebugOn ()
 
static void SetGlobalDefaultDebug (bool debugFlag)
 
static void GlobalWarningDisplayOn ()
 
static void GlobalWarningDisplayOff ()
 
static void SetGlobalWarningDisplay (bool flag)
 
static bool GetGlobalWarningDisplay ()
 
static void SetGlobalDefaultNumberOfThreads (unsigned int n)
 
static unsigned int GetGlobalDefaultNumberOfThreads ()
 
static double GetGlobalDefaultCoordinateTolerance ()
 Access the global tolerance to determine congruent spaces. More...
 
static void SetGlobalDefaultCoordinateTolerance (double)
 Access the global tolerance to determine congruent spaces. More...
 
static double GetGlobalDefaultDirectionTolerance ()
 Access the global tolerance to determine congruent spaces. More...
 
static void SetGlobalDefaultDirectionTolerance (double)
 Access the global tolerance to determine congruent spaces. More...
 
- Protected Member Functions inherited from itk::simple::ProcessObject
virtual unsigned long AddITKObserver (const itk::EventObject &, itk::Command *)
 
virtual itk::ProcessObjectGetActiveProcess ()
 
virtual void OnActiveProcessDelete ()
 
virtual void onCommandDelete (const itk::simple::Command *cmd) SITK_NOEXCEPT
 
virtual void PreUpdate (itk::ProcessObject *p)
 
virtual void RemoveITKObserver (EventCommand &e)
 
- Protected Member Functions inherited from itk::simple::NonCopyable
 NonCopyable ()
 
- Static Protected Member Functions inherited from itk::simple::ImageFilter< 1 >
static void FixNonZeroIndex (TImageType *img)
 
- Static Protected Member Functions inherited from itk::simple::ProcessObject
template<class TImageType >
static TImageType::ConstPointer CastImageToITK (const Image &img)
 
template<class TImageType >
static Image CastITKToImage (TImageType *img)
 
template<class TPixelType , unsigned int VImageDimension, unsigned int VLength, template< typename, unsigned int > class TVector>
static Image CastITKToImage (itk::Image< TVector< TPixelType, VLength >, VImageDimension > *img)
 
static const itk::EventObjectGetITKEventObject (EventEnum e)
 
template<typename T >
static std::ostream & ToStringHelper (std::ostream &os, const T &v)
 
static std::ostream & ToStringHelper (std::ostream &os, const char &v)
 
static std::ostream & ToStringHelper (std::ostream &os, const signed char &v)
 
static std::ostream & ToStringHelper (std::ostream &os, const unsigned char &v)
 

Detailed Description

Fills in holes and cavities by iteratively applying a voting operation.

This filter uses internally the VotingBinaryHoleFillingImageFilter , and runs it iteratively until no pixels are being changed or until it reaches the maximum number of iterations. The purpose of the filter is to fill in holes of medium size (tens of pixels in radius). In principle the number of iterations is related to the size of the holes to be filled in. The larger the holes, the more iteration must be run with this filter in order to fill in the full hole. The size of the neighborhood is also related to the curvature of the hole borders and therefore the hole size. Note that as a collateral effect this filter may also fill in cavities in the external side of structures.

This filter is templated over a single image type because the output image type must be the same as the input image type. This is required in order to make the iterations possible, since the output image of one iteration is taken as the input image for the next iteration.

See also
Image
VotingBinaryImageFilter
VotingBinaryHoleFillingImageFilter
Neighborhood
NeighborhoodOperator
NeighborhoodIterator
itk::simple::VotingBinaryIterativeHoleFilling for the procedural interface
itk::VotingBinaryIterativeHoleFillingImageFilter for the Doxygen on the original ITK class.

Definition at line 56 of file sitkVotingBinaryIterativeHoleFillingImageFilter.h.

Member Typedef Documentation

typedef Image(Self::* itk::simple::VotingBinaryIterativeHoleFillingImageFilter::MemberFunctionType) (const Image &image1)
private

Setup for member function dispatching

Definition at line 143 of file sitkVotingBinaryIterativeHoleFillingImageFilter.h.

Define the pixels types supported by this filter

Definition at line 68 of file sitkVotingBinaryIterativeHoleFillingImageFilter.h.

Constructor & Destructor Documentation

virtual itk::simple::VotingBinaryIterativeHoleFillingImageFilter::~VotingBinaryIterativeHoleFillingImageFilter ( )
virtual

Destructor

itk::simple::VotingBinaryIterativeHoleFillingImageFilter::VotingBinaryIterativeHoleFillingImageFilter ( )

Default Constructor that takes no arguments and initializes default parameters

Member Function Documentation

Image itk::simple::VotingBinaryIterativeHoleFillingImageFilter::Execute ( const Image image1)

Execute the filter on the input image

Image itk::simple::VotingBinaryIterativeHoleFillingImageFilter::Execute ( const Image image1,
const std::vector< unsigned int > &  radius,
unsigned int  maximumNumberOfIterations,
unsigned int  majorityThreshold,
double  foregroundValue,
double  backgroundValue 
)

Execute the filter on the input image with the given parameters

template<class TImageType >
Image itk::simple::VotingBinaryIterativeHoleFillingImageFilter::ExecuteInternal ( const Image image1)
private
double itk::simple::VotingBinaryIterativeHoleFillingImageFilter::GetBackgroundValue ( ) const
inline

Get the value associated with the Foreground (or the object) on the binary input image and the Background .

Definition at line 124 of file sitkVotingBinaryIterativeHoleFillingImageFilter.h.

double itk::simple::VotingBinaryIterativeHoleFillingImageFilter::GetForegroundValue ( ) const
inline

Get the value associated with the Foreground (or the object) on the binary input image and the Background .

Definition at line 114 of file sitkVotingBinaryIterativeHoleFillingImageFilter.h.

unsigned int itk::simple::VotingBinaryIterativeHoleFillingImageFilter::GetMajorityThreshold ( ) const
inline

Majority threshold. It is the number of pixels over 50% that will decide whether an OFF pixel will become ON or not. For example, if the neighborhood of a pixel has 124 pixels (excluding itself), the 50% will be 62, and if you set upd a Majority threshold of 5, that means that the filter will require 67 or more neighbor pixels to be ON in order to switch the current OFF pixel to ON. The default value is 1.

Definition at line 104 of file sitkVotingBinaryIterativeHoleFillingImageFilter.h.

unsigned int itk::simple::VotingBinaryIterativeHoleFillingImageFilter::GetMaximumNumberOfIterations ( ) const
inline

Maximum number of iterations. This filter is executed iteratively as long as at least one pixel has changed in a previous iteration, or until the maximum number of iterations has been reached.

Definition at line 94 of file sitkVotingBinaryIterativeHoleFillingImageFilter.h.

std::string itk::simple::VotingBinaryIterativeHoleFillingImageFilter::GetName ( ) const
inlinevirtual

Name of this class

Implements itk::simple::ProcessObject.

Definition at line 126 of file sitkVotingBinaryIterativeHoleFillingImageFilter.h.

std::vector<unsigned int> itk::simple::VotingBinaryIterativeHoleFillingImageFilter::GetRadius ( ) const
inline

Get the radius of the neighborhood used to compute the median

Definition at line 84 of file sitkVotingBinaryIterativeHoleFillingImageFilter.h.

Self& itk::simple::VotingBinaryIterativeHoleFillingImageFilter::SetBackgroundValue ( double  BackgroundValue)
inline

Set the value associated with the Foreground (or the object) on the binary input image and the Background .

Definition at line 119 of file sitkVotingBinaryIterativeHoleFillingImageFilter.h.

Self& itk::simple::VotingBinaryIterativeHoleFillingImageFilter::SetForegroundValue ( double  ForegroundValue)
inline

Set the value associated with the Foreground (or the object) on the binary input image and the Background .

Definition at line 109 of file sitkVotingBinaryIterativeHoleFillingImageFilter.h.

Self& itk::simple::VotingBinaryIterativeHoleFillingImageFilter::SetMajorityThreshold ( unsigned int  MajorityThreshold)
inline

Majority threshold. It is the number of pixels over 50% that will decide whether an OFF pixel will become ON or not. For example, if the neighborhood of a pixel has 124 pixels (excluding itself), the 50% will be 62, and if you set upd a Majority threshold of 5, that means that the filter will require 67 or more neighbor pixels to be ON in order to switch the current OFF pixel to ON. The default value is 1.

Definition at line 99 of file sitkVotingBinaryIterativeHoleFillingImageFilter.h.

Self& itk::simple::VotingBinaryIterativeHoleFillingImageFilter::SetMaximumNumberOfIterations ( unsigned int  MaximumNumberOfIterations)
inline

Maximum number of iterations. This filter is executed iteratively as long as at least one pixel has changed in a previous iteration, or until the maximum number of iterations has been reached.

Definition at line 89 of file sitkVotingBinaryIterativeHoleFillingImageFilter.h.

Self& itk::simple::VotingBinaryIterativeHoleFillingImageFilter::SetRadius ( const std::vector< unsigned int > &  Radius)
inline

Set the radius of the neighborhood used to compute the median.

Definition at line 75 of file sitkVotingBinaryIterativeHoleFillingImageFilter.h.

Self& itk::simple::VotingBinaryIterativeHoleFillingImageFilter::SetRadius ( unsigned int  value)
inline

Set the values of the Radius vector all to value

Definition at line 78 of file sitkVotingBinaryIterativeHoleFillingImageFilter.h.

std::string itk::simple::VotingBinaryIterativeHoleFillingImageFilter::ToString ( ) const
virtual

Print ourselves out

Reimplemented from itk::simple::ProcessObject.

Friends And Related Function Documentation

Member Data Documentation

double itk::simple::VotingBinaryIterativeHoleFillingImageFilter::m_BackgroundValue
private
double itk::simple::VotingBinaryIterativeHoleFillingImageFilter::m_ForegroundValue
private
unsigned int itk::simple::VotingBinaryIterativeHoleFillingImageFilter::m_MajorityThreshold
private
unsigned int itk::simple::VotingBinaryIterativeHoleFillingImageFilter::m_MaximumNumberOfIterations
private
nsstd::auto_ptr<detail::MemberFunctionFactory<MemberFunctionType> > itk::simple::VotingBinaryIterativeHoleFillingImageFilter::m_MemberFactory
private
std::vector<unsigned int> itk::simple::VotingBinaryIterativeHoleFillingImageFilter::m_Radius
private

The documentation for this class was generated from the following file: