ITK/Tcons/Agendas/2011 01 18

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How to Join the Tcon

Number to Call

Only for this instance, we will use the Kitware number: 

  Please join the following teleconference line:
      Toll-Free #:      1-800-704-9804 
      International #:  1-404-920-6604
      Participant Code: 61466276


Please be patient, due to some unforeseen circumstances, the call may not start on time...

  • 1-800-728-9607 (in the US) or
  • +1 9139049873 (international)
  • access code 6815251

Webex

Project Management

February Meeting in Boston

  • Set for February 2-3, 2011 in Boston at Harvard Medical School.

Please register for the meeting ASAP. Here is the link for the registration:

Changing Tcon Day/Time

We ran a survey:

The tcon times were reduced to the following four options:

  1. Wednesday 10am EST
  2. Friday 10am EST
  3. Friday 11am EST
  4. Tuesday 3pm EST


Technical Topics

Dashboard

Lingering Failing Tests ( Feet + Heat )

  • DICOM Tests tkGDCMSeriesStreamReadImageWrite3 and tkGDCMSeriesStreamReadImageWrite4
    • Malaterre/Roden status update
    • Able to reproduce the problem?
    • resolution?
  • KWStyle failing
    • Add KWStyle tests to CDash@Home


New Year's Resolutions

Schedule

ITKv4-A04

  • Done: 64-bits case closed.
  • New CMake option:
    • ITK_USE_64BITS_IDS


ITKv4 A05

  • Date: January 28th ( hard deadline before Winter Design Meeting )

Major topics to be completed

  • GPU Draft Implementation
  • SimpleITK Draft Implementation
  • TimeStamps (will try)

Outreach

  • MICCAI 2011 Call for Workshops and Tutorials
  • Note that we already have an accepted tutorial for CVPR 2011 on the use of ITK+OpenCV

Gerrit Reviews

Doxygen Nightly

ITK Data

We had a tcon on December 16th.

Summary here:

Data Collection

  • Brad King working on improving usability

Migration Guide Process

Simple ITK

  • Code generations
    • Using Lua and JSON
  • Interfacing to
    • ImageJ / Fiji
    • CellProfiler

GPU

DICOM

Dan and Mathieu to report

Image Registration Revision

  • Start sending patches to Gerrit
    • New CompositeTransform class is underway
    • New DeformationFieldTransform class is underway
    • Transform IO will be adjusted accordingly

Level Set

Time Stamp Proposal

Modularization

  • Xiaoxiao is working on building the modular ITK module by module. Details of the status can be found in [1].

TIFF Update

  • Brad King addressed the int issues
  • Currently at
 git fetch git://kwsource.kitwarein.com/~bradking/itk/bradkings-itk.git +libtiff4beta6:libtiff4beta6

Sequestered Reference Applications

We have already made significant changes, and they are not being recorded yet. It is time to setup these reference applications.

Ongoing

  • V3D Plugins
  • Slicer
    • 3.6 sequestered in Github
    • 4.0 to be adjusted now during the NAMIC AHM meeting.
  • VV
  • Insight Applications now submitting
    • Broken: need to use it as an example for the Migration Guide.

Development Versions following ITKv4

Pending

  • IGSTK, after SPIE'11 (IGSTK5.0)
  • Insight Applications (ITKApps from v3.20)
  • ITK tests from v3.20

Wrapping


ITK Readers for Microscopy formats

  • There's a need for readers in the microscopy community in order to be able to use ITK
    • Zeiss (LSM and ZVI)
    • Leica (LIF)
    • Olympus (OIB)
    • Nikon ()
  • BioFormats has readers and example files for these. It is Java with C++ bindings for ITK, BUT it's GPL.
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