ITK/Examples/ImageProcessing/MaskImageFilter: Difference between revisions

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(Created page with "==MaskImageFilter.cxx== <source lang="cpp"> #include "itkImage.h" #include "itkImageFileReader.h" #include "itkMaskImageFilter.h" #include "itkRescaleIntensityImageFilter.h" #in...")
 
(Deprecated content that is moved to sphinx)
 
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==MaskImageFilter.cxx==
{{warning|1=The media wiki content on this page is no longer maintained.  The examples presented on the https://itk.org/Wiki/*  pages likely require ITK version 4.13 or earlier releasesIn many cases, the examples on this page no longer conform to the best practices for modern ITK versions.
<source lang="cpp">
}}
#include "itkImage.h"
#include "itkImageFileReader.h"
#include "itkMaskImageFilter.h"
#include "itkRescaleIntensityImageFilter.h"
 
#include <itkImageToVTKImageFilter.h>
 
#include "vtkImageViewer.h"
#include "vtkRenderWindowInteractor.h"
#include "vtkSmartPointer.h"
#include "vtkImageActor.h"
#include "vtkInteractorStyleImage.h"
#include "vtkRenderer.h"
 
typedef itk::Image<unsigned char, 2>  ImageType;
 
void CreateHalfMask(ImageType::Pointer image, ImageType::Pointer mask);
 
int main(int argc, char *argv[])
{
  if(argc < 2)
    {
    std::cerr << "Required: filename" << std::endl;
    return EXIT_FAILURE;
    }
 
  typedef itk::ImageFileReader<ImageType> ReaderType;
  ReaderType::Pointer reader = ReaderType::New();
  reader->SetFileName(argv[1]);
  reader->Update();
 
  ImageType::Pointer mask = ImageType::New();
  CreateHalfMask(reader->GetOutput(), mask);
 
  typedef itk::MaskImageFilter< ImageType, ImageType > MaskFilterType;
  MaskFilterType::Pointer maskFilter = MaskFilterType::New();
  maskFilter->SetInput1(reader->GetOutput());
  maskFilter->SetInput2(mask);
  maskFilter->Update();;
 
  // Visualize original image
  typedef itk::ImageToVTKImageFilter<ImageType> ConnectorType;
 
  ConnectorType::Pointer originalConnector = ConnectorType::New();
  originalConnector->SetInput(reader->GetOutput());
  vtkSmartPointer<vtkImageActor> originalActor =
    vtkSmartPointer<vtkImageActor>::New();
  originalActor->SetInput(originalConnector->GetOutput());
 
  // Visualize mask image
  typedef itk::RescaleIntensityImageFilter< ImageType, ImageType > RescaleFilterType;
  RescaleFilterType::Pointer rescaleFilter = RescaleFilterType::New();
  rescaleFilter->SetInput(mask);
  rescaleFilter->SetOutputMinimum(0);
  rescaleFilter->SetOutputMaximum(255);
 
  ConnectorType::Pointer maskConnector = ConnectorType::New();
  maskConnector->SetInput(rescaleFilter->GetOutput());
 
  vtkSmartPointer<vtkImageActor> maskActor =
    vtkSmartPointer<vtkImageActor>::New();
  maskActor->SetInput(maskConnector->GetOutput());
 
  // Visualize masked image
  ConnectorType::Pointer maskedConnector = ConnectorType::New();
  maskedConnector->SetInput(maskFilter->GetOutput());
 
  vtkSmartPointer<vtkImageActor> maskedActor =
    vtkSmartPointer<vtkImageActor>::New();
  maskedActor->SetInput(maskedConnector->GetOutput());
 
 
  // There will be one render window
  vtkSmartPointer<vtkRenderWindow> renderWindow =
    vtkSmartPointer<vtkRenderWindow>::New();
  renderWindow->SetSize(900, 300);
 
  vtkSmartPointer<vtkRenderWindowInteractor> interactor =
    vtkSmartPointer<vtkRenderWindowInteractor>::New();
  interactor->SetRenderWindow(renderWindow);
 
  // Define viewport ranges
  // (xmin, ymin, xmax, ymax)
  double leftViewport[4] = {0.0, 0.0, 0.33, 1.0};
  double centerViewport[4] = {0.33, 0.0, 0.66, 1.0};
  double rightViewport[4] = {0.66, 0.0, 1.0, 1.0};
 
  // Setup both renderers
  vtkSmartPointer<vtkRenderer> leftRenderer =
    vtkSmartPointer<vtkRenderer>::New();
  renderWindow->AddRenderer(leftRenderer);
  leftRenderer->SetViewport(leftViewport);
  leftRenderer->SetBackground(.6, .5, .4);
 
  // Setup both renderers
  vtkSmartPointer<vtkRenderer> centerRenderer =
    vtkSmartPointer<vtkRenderer>::New();
  renderWindow->AddRenderer(centerRenderer);
  centerRenderer->SetViewport(centerViewport);
  centerRenderer->SetBackground(.6, .5, .4);
 
  vtkSmartPointer<vtkRenderer> rightRenderer =
    vtkSmartPointer<vtkRenderer>::New();
  renderWindow->AddRenderer(rightRenderer);
  rightRenderer->SetViewport(rightViewport);
   rightRenderer->SetBackground(.4, .5, .6);
 
  // Add the sphere to the left and the cube to the right
  leftRenderer->AddActor(originalActor);
  centerRenderer->AddActor(maskActor);
  rightRenderer->AddActor(maskedActor);
 
  leftRenderer->ResetCamera();
  centerRenderer->ResetCamera();
  rightRenderer->ResetCamera();
 
  renderWindow->Render();
 
  vtkSmartPointer<vtkInteractorStyleImage> style =
    vtkSmartPointer<vtkInteractorStyleImage>::New();
 
  interactor->SetInteractorStyle(style);
 
  interactor->Start();
 
  return EXIT_SUCCESS;
}
 
 
void CreateHalfMask(ImageType::Pointer image, ImageType::Pointer mask)
{
  ImageType::RegionType region = image->GetLargestPossibleRegion();
 
  mask->SetRegions(region);
  mask->Allocate();
 
  ImageType::SizeType regionSize = region.GetSize();
 
  itk::ImageRegionIterator<ImageType> imageIterator(mask,region);
 
  // Make the left half of the mask white and the right half black
  while(!imageIterator.IsAtEnd())
  {
    if(imageIterator.GetIndex()[0] > regionSize[0] / 2)
        {
        imageIterator.Set(0);
        }
      else
        {
        imageIterator.Set(1);
        }
 
    ++imageIterator;
  }
 
}
</source>
 
==CMakeLists.txt==
<source lang="cmake">
cmake_minimum_required(VERSION 2.6)
 
PROJECT(MaskImageFilter)
 
include_directories(/home/doriad/src/ITK/Wrapping/WrapITK/ExternalProjects/ItkVtkGlue/src/)
 
FIND_PACKAGE(VTK REQUIRED)
INCLUDE(${VTK_USE_FILE})
 
FIND_PACKAGE(ITK REQUIRED)
INCLUDE(${ITK_USE_FILE})
 
ADD_EXECUTABLE(MaskImageFilter MaskImageFilter.cxx)
TARGET_LINK_LIBRARIES(MaskImageFilter
vtkHybrid
ITKIO ITKBasicFilters ITKCommon
)
 
 
</source>

Latest revision as of 19:42, 5 June 2019

Warning: The media wiki content on this page is no longer maintained. The examples presented on the https://itk.org/Wiki/* pages likely require ITK version 4.13 or earlier releases. In many cases, the examples on this page no longer conform to the best practices for modern ITK versions.