Difference between revisions of "ITK/Tcons/Agendas/2010 11 02"

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* Take the survey - http://www.surveymonkey.com/s/SimpleITKCommunitySurvey
* Take the survey - http://www.surveymonkey.com/s/SimpleITKCommunitySurvey
* Survey results - http://www.surveymonkey.com/sr.aspx?sm=7s_2f_2baOS0Pe06OO2dWBU_2btf8RPSPzgi8HGlud9B0ILsg_3d
* Survey results - http://www.surveymonkey.com/sr.aspx?sm=7s_2f_2baOS0Pe06OO2dWBU_2btf8RPSPzgi8HGlud9B0ILsg_3d
== Image Registration Revision ==
* How to manage topic Branch in Git ?
* Mailing list was created:
** http://public.kitware.com/cgi-bin/mailman/listinfo/insight-registration
** and announced:
** http://www.itk.org/pipermail/insight-users/2010-September/038232.html
* Past tcon:
** [[ITK_Release_4/Enhancing Image Registration Framework/Tcon 2010-09-07|Tcon 2010-09-07]]
=== Registration Topic Page ===
* [[ITK_Release_4/Enhancing Image Registration Framework|Enhancing Image Registration Framework]]
=== Related Discussions ===
* Ziv Yaniv to summarize
* Is the [http://www.itk.org/Wiki/Proposals:Refactoring_of_optimization_framework | refactoring of the optimization framework] going to be considered for itkv4?

== Dashboard ==
== Dashboard ==

Latest revision as of 01:23, 2 November 2010

How to Join the Tcon

Number to Call

  • 1-800-728-9607 (in the US) or
  • +1 9139049873 (international)
  • access code 6815251


Project Management

Task Order #2

  • Draft received by some contractors
  • To be sent back to Terry ASAP.

November Meeting in Iowa

February Meeting

  • Set for February 2-3, 2011 in Boston at Harvard Medical School.
    • A link to a web site for registration and hotel information will be sent shortly.

Technical Topics

Previous Meeting Action Items


  • Completed.
  • Copyright headers in all ITK files were changed.
    • Thanks to Hans Johnson for crafting and sharing the script.
    • Thanks to the reviewers for looking at such a large commit.
  • Licensing Summary in ITK Wiki

Simple ITK

Image Registration Revision

Registration Topic Page

Related Discussions


Failing Tests

  • DeformableRegistration8 in eldorado (the only machine that runs these tests)

Open Gerrit Reviews

Migration Guide Process


  • Let's tag now
    • And make libtiff4 update the item for ITKv4-A03
    • So that at the November meeting we can proceed to spawn Git topic branches


  • Target to cut it by Nov 15th

Level Set


  • Xiaoxiao Liu (at Kitware) to start working on partitioning the toolkit

TIFF Update

  • Brad King addressed the int issues
  • Currently at
 git fetch git://kwsource.kitwarein.com/~bradking/itk/bradkings-itk.git +libtiff4beta6:libtiff4beta6
  • Luis resuming it
    • Need to coordinate with Arnaud to build it in Mac 10.5
    • Will submit it to Gerrit again soon.


Dan and Mathieu to report

Gerrit Code Review


CDash @ Home

  • Zach Mullen to report
  • cdash@home progress
  • Prototype will be ready by Nov meeting.



Recent version of doxygen (>= 1.7.0) runs multiple instances of dot in parallel!!!

Tests with doxygen 1.7.1, on a 6 cores machine 12Gb RAM

  • with unmodified doxygen.config.in 330 min
  • by changing cache size (and tweaking few parameters) 311 min
  • Could it be improved?

Sequestered Reference Applications

We have already made significant changes, and they are not being recorded yet. It is time to setup these reference applications.


  • V3D Plugins
  • Slicer
  • VV
  • Insight Applications now submitting
    • Broken: need to use it as an example for the Migration Guide.

Development Versions following ITKv4


  • Insight Applications (ITKApps from v3.20)
  • ITK tests from v3.20


ITK Readers for Microscopy formats

  • There's a need for readers in the microscopy community in order to be able to use ITK
    • Zeiss (LSM and ZVI)
    • Leica (LIF)
    • Olympus (OIB)
    • Nikon ()
  • BioFormats has readers and example files for these. It is Java with C++ bindings for ITK, BUT it's GPL.

Coding Style


  • Fixing KWStyle/CDash/CTest for Git : Brad Davis report
  • The Google C+++ Style Guide is a good example of a style guide. Although the specifics may differ, the format and coverage of this guide is very nice. We may consider producing a similar Guide for ITKv4.

Uncrustify Code Cleanup (Hans)

  • Status?

Software Process

Migration to Git

  • Migration Completed
  • Updating Dashboard Machines to Git
  • Contractors to send information to Kitware about the developers who should receive Git write access.
    • (include email and public SSH key)

Clean up Releases

Release Tag Date Major Changes
Alpha-01 August 7 VS6,BCC55, SunCC (5.7?), Metrowerks Removal (based on compiler features), Remove large Images
Alpha-02 August 14 CMake Variables configuration cleanup
Alpha-03 August 21 GDCM 2.0, OpenJpeg-v2, +JPEG2000
Alpha-04 August 28 Third party libraries update: TIFF, JPEG, PNG


Unit testing framework

A tutorial has been drafted using the Google Testing framework.