SimpleITK/Tcon 2011 6 8: Difference between revisions

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   https://cc.readytalk.com/r/77mucyg9wmzs
   https://cc.readytalk.com/r/12evkugwgu95
 


= Attendees =
= Attendees =
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* Brad Lowekamp
* Brad Lowekamp
* Gabe Hart
* Gabe Hart
* Hans Johnson
* Luis Ibanez
* Luis Ibanez


 
= IMPORTANT-new repository- IMPORTANT =
= IMPORTANT =


*Repository has moved DO NOT USE GITHUB any more
*Repository has moved DO NOT USE GITHUB any more
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**http://itk.org/gitweb?p=SimpleITK.git
**http://itk.org/gitweb?p=SimpleITK.git
*Getting Started
*Getting Started
:<code>mv SimpleITK SimpleITK-old</code>
mv SimpleITK SimpleITK-old
:<code>git clone --recursive http://itk.org/SimpleITK.git:</code>
git clone --recursive http://itk.org/SimpleITK.git
:<code>cd SimpleITK</code>
cd SimpleITK
:<code>git remote add stage git://public.kitware.com/stage/SimpleITK.git</code>
git remote add stage git://public.kitware.com/stage/SimpleITK.git
:<code>git config remote.stage.pushurl git@public.kitware.com:stage/SimpleITK.git</code>
git config remote.stage.pushurl git@public.kitware.com:stage/SimpleITK.git
:<code>git fetch --all --prune</code>
git fetch --all --prune
:<code>ssh git@public.kitware.com stage SimpleITK print</code>
ssh git@public.kitware.com stage SimpleITK print
*Additional Information
*Additional Information
**http://public.kitware.com/Wiki/Git/Workflow/Stage
**http://public.kitware.com/Wiki/Git/Workflow/Stage
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*DOXYGEN: http://erie.nlm.nih.gov/~blowek1/SimpleITK/index.html
*DOXYGEN: http://erie.nlm.nih.gov/~blowek1/SimpleITK/index.html
*JIRA: https://itk.icts.uiowa.edu/jira/browse/SIMPLEITK
*JIRA: https://itk.icts.uiowa.edu/jira/browse/SIMPLEITK
= User Feedback =
==Hans==
== Other Users ==
* ImageJDev/FIJI hackathon: Jan 29th - Feb 11th
** Integrate ITK with ImageJ
** Integrate ITK with CellProfiler
* ImageJDev image is 5D (x,y,z,t,channel)
** Internal class ImagePlus use Java arrays




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*40-ConnectingSimpleITKImageTOJava
*40-ConnectingSimpleITKImageTOJava
** What happened to the ImportImageFilter?
** What happened to the ImportImageFilter?
*11-AddingFFTs
** Should Geatan's IJ paper be move into ITK?
** should be completed before lunch today!
* 49-GeometryTransforms
** How do we specify Regions?


* Test drivers need work
* Test drivers need work
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** They currently don't work with Valgrind due to sub processes
** They currently don't work with Valgrind due to sub processes


==Review JIRA Issues==


* 4-AddingGetPixelMethods
Any Blocking issues which need to be addressed?
** CLOSED - merged to master


* AddingOperators
** Completed


==Review JIRA Issues==
= User Feedback =


Any Blocking issues which need to be addressed?
* Any new user feedback?


= Schedule =
= Schedule =

Latest revision as of 17:51, 13 February 2013

Tcon Information

Phone Line:

  Please join the following teleconference line:
      Toll-Free #:      1-800-704-9804 
      International #:  1-404-920-6604
      Participant Code: 61466276
  Wednesday, May 25th, 9:30am Eastern Time


  https://cc.readytalk.com/r/12evkugwgu95

Attendees

  • Dan Blezek
  • Brad Lowekamp
  • Gabe Hart
  • Hans Johnson
  • Luis Ibanez

IMPORTANT-new repository- IMPORTANT

mv SimpleITK SimpleITK-old
git clone --recursive http://itk.org/SimpleITK.git
cd SimpleITK
git remote add stage git://public.kitware.com/stage/SimpleITK.git
git config remote.stage.pushurl git@public.kitware.com:stage/SimpleITK.git
git fetch --all --prune
ssh git@public.kitware.com stage SimpleITK print
  • Additional Information
  • It should be easier to use the topic based workflow
    • There are check to prevent common errors
    • There is a list of topic merged into next, and staged
    • The named topic in the stage can be modified, and remerged
      • No longer a need to find the right commit to continue a topic branch
  • Workflow overview
    • Create topic branch from master
    • edit file and commit in topic branch
    • push to stage
    • issue ssh command to merge topic into next
  • Example
git checkout master
git pull
git checkout -b topic
edit files
git commit ...
git fetch stage --prune
git push stage HEAD
ssh git@public.kitware.com stage SimpleITK print

ssh git@public.kitware.com stage repo merge -b next topic-name

Links


Daily Details

Currently Staged Topics

90-ImageCopyConstructorWarning | master=0 next=1
SIMPLEITK-77_imshow_function | master=0 next=0
SIMPLEITK-1_registration | master=0 next=0
SIMPLEITK-51-AutogenerateDocumentation | master=0 next=0
SIMPLEITK-75-AddDoxygenPageForContributing | master=0 next=1
SIMPLEITK-78_LabelStatisticsImageFilter | master=0 next=0
11-AddingFFTs | master=0 next=0
  • DO NOT MERGE THESE
SIMPLEITK-89_Fixing_warnings | master=0 next=0 
DONT_MERGE_FIX_SIMPLEITK-80_no_individual_headers | master=0 next=0
contains-next-SIMPLEITK-89_Fixing_warnings | master=0 next=0

Other Open Topics

  • Documentation
    • Developer Practices
    • Getting Started
  • CMake
    • Shared Libraries
    • Installation
    • R, C#
    • Update to best CMake practices
    • Hans has new CMake issues!


  • 40-ConnectingSimpleITKImageTOJava
    • What happened to the ImportImageFilter?
  • Test drivers need work
    • Can we reuse ITK's?
    • They currently don't work with Valgrind due to sub processes

Review JIRA Issues

Any Blocking issues which need to be addressed?


User Feedback

  • Any new user feedback?

Schedule

Discuss long term goals and milestones.

  • Documentations
    • Luis to begin Slide Documentation
      • Getting started guide
      • Users Guide
    • How to populate Doxygen
  • Automate Script to List filters wrapped
    • This script should take as input a list of ITK Modules or Directories, for each modual determine which filters are implemented in SimpleITK
    • Additional input would include filter/files to exclude
    • Output could be a dox file, so that it could be a doxygen related page
  • Registration is very important

Action Items