TubeTK/Events/2010.11.02: Difference between revisions

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*  Implementation on the ComputeTortuosity module (only Distance Metric) ---->OK!!
*  Implementation on the ComputeTortuosity module (only Distance Metric) ---->OK!!
** With input data = Branch-truth.tre (from tubetk/Data)
** With input data = Branch-truth.tre (from tubetk/Data)
*** With mask covering the whole tube (Branch.n010.mha):
*** With mask covering the whole tube (Branch.n010.mha):
**** Distance Metric Tortuosity for tube section 0 - 999 is 0.0524638
**** Distance Metric Tortuosity for tube section 0 - 999 is 0.0524638
**** Distance Metric Tortuosity for tube section 0 - 499 is 0.0656099
**** Distance Metric Tortuosity for tube section 0 - 499 is 0.0656099
*** With other mask (Branch.n010.sub.mha) not covering the whole scene
*** With other mask (Branch.n010.sub.mha) not covering the whole scene
**** Distance Metric Tortuosity for tube section 0 - 399 is 0.0811677
**** Distance Metric Tortuosity for tube section 0 - 399 is 0.0811677
*Future
** Grassroots data visualization
** Conference website
** CLANG errors in metaImage


= Stephen =


*Future
* TubeSpatialObject
** obtain dimension??? make it work for every dimension??
** Bug in ComputeTangentAndNormals
** #tube command ????
** Therefore, Tube/Base/Segmentation/VTree/tubeMath.h
** Implementation of the other 2 methods : ICM SOAM ????
** Pursue refactoring of itk's SpatialObject classes
** Time? Funding?
* RadiusEstimation
** Refactoring complete, bugs remain, tests being added
* Slicer integration
** Next Priority
* USC
** Funding becoming active
** Urgent need for unsupervised method
* Grassroots
** Received data
** Romain to view in Slicer and send visualization to Danielle and Stephen
** NDA signed
** Meeting next week
* UCLA/TBI
** Received data (can't find it)
** Visualizations needed (Danielle)

Revision as of 15:42, 2 November 2010

Romain

  • Implementation on the ComputeTortuosity module (only Distance Metric) ---->OK!!
    • With input data = Branch-truth.tre (from tubetk/Data)
      • With mask covering the whole tube (Branch.n010.mha):
        • Distance Metric Tortuosity for tube section 0 - 999 is 0.0524638
        • Distance Metric Tortuosity for tube section 0 - 499 is 0.0656099
      • With other mask (Branch.n010.sub.mha) not covering the whole scene
        • Distance Metric Tortuosity for tube section 0 - 399 is 0.0811677
  • Future
    • Grassroots data visualization
    • Conference website
    • CLANG errors in metaImage

Stephen

  • TubeSpatialObject
    • Bug in ComputeTangentAndNormals
    • Therefore, Tube/Base/Segmentation/VTree/tubeMath.h
    • Pursue refactoring of itk's SpatialObject classes
    • Time? Funding?
  • RadiusEstimation
    • Refactoring complete, bugs remain, tests being added
  • Slicer integration
    • Next Priority
  • USC
    • Funding becoming active
    • Urgent need for unsupervised method
  • Grassroots
    • Received data
    • Romain to view in Slicer and send visualization to Danielle and Stephen
    • NDA signed
    • Meeting next week
  • UCLA/TBI
    • Received data (can't find it)
    • Visualizations needed (Danielle)