[ITK Community] [Insight-developers] [CMake] Building Matlab Mex extensions that link to ITK?

[Williams, Norman K]

The problem is even stranger than that.

In my CMakeLists.txt I am using (sort of) the 'stub + library' method
suggested by Matt McCormick. But I'm not doing exactly what he did; I try
and get all the libraries needed to link and pass them in to MEX.  This
ALMOST works, but ITK_LIBRARIES doesn't list all the libraries needed,
hence I still get undefined externals -- stuff from vnl and gdcm.
Apparently there are library dependencies that are handled down in the
murk of CMake's build logic.

--------------------CMAKELISTS.TXT-----------------------
find_package(Matlab REQUIRED)

set(MEX_SOURCES nrrdLoadWithMetadata nrrdSaveWithMetadata
itkLoadWithMetadata itkSaveWithMetadata)
set(MEX_SHARED_OBJECTS "")
# get library locations for ITK libraries
set(_ITK_LIBS)
foreach(itklib ${ITK_LIBRARIES})
  if(TARGET ${itklib})
    get_property(itk_lib_path TARGET ${itklib} PROPERTY LOCATION)
    list(APPEND _ITK_LIBS "${itk_lib_path}")
  else()
    list(APPEND _ITK_LIBS "${itklib}")
  endif()
endforeach()

foreach(MEX_PREFIX ${MEX_SOURCES})
  # stick actual code in static lib
  add_library(${MEX_PREFIX} STATIC ${MEX_PREFIX}.cxx)
  # link in all necessary libraries
  target_link_libraries(${MEX_PREFIX} ${Teem_LIBRARIES}
    ${ITK_LIBRARIES}
    ${ZLIB_LIBRARY})

  get_property(mex_lib_path TARGET ${MEX_PREFIX} PROPERTY LOCATION)

  set(MEX_SRC_PATH ${CMAKE_CURRENT_SOURCE_DIR}/${MEX_PREFIX}Stub.cxx)
  set(MEX_OBJECT_NAME ${MEX_PREFIX}.${MATLAB_MEX_EXT})
  list(APPEND MEX_SHARED_OBJECTS ${MEX_OBJECT_NAME})

  add_custom_command(OUTPUT ${MEX_PREFIX}.${MATLAB_MEX_EXT}
    ## HACK: The next line needs to be more general
    COMMAND ${MATLAB_MEX_PATH} -cxx ${CMAKE_CXX_FLAGS_Release}
${MEX_SRC_PATH}
    ${mex_lib_path}
    ${_ITK_LIBS}
    -L${Teem_LIBRARY_DIR} -lteem
    ${ZLIB_LIBRARY}
    DEPENDS ${MEX_PREFIX} ${MEX_SRC_PATH}
    IMPLICIT_DEPENDS C ${MEX_SRC_PATH}
    WORKING_DIRECTORY ${${PRIMARY_PROJECT_NAME}_SOURCE_DIR}/MATLAB_SCRIPTS
    COMMENT "BUILDING MEX_FILE: ${MEX_SRC_PATH}" )
endforeach()

add_custom_target(MEX_BLD ALL
  DEPENDS ${MEX_SHARED_OBJECTS}
  #[WORKING_DIRECTORY dir]
  COMMENT "BUILDING TARGET MEX_FILE: ${MEX_SRC}"
  SOURCES ${MATLAB_MEX_PATH} )

-------------------------Build
Output---------------------------------------------

make-- Configuring done
-- Generating done
-- Build files have been written to:
/Volumes/scratch/kent/CompressedSensingDWI/build/CompressedSensingDWI-build
[  0%] Built target CompressedSensingDWIFetchData
[ 11%] Built target itkSaveWithMetadata
[ 22%] Built target nrrdSaveWithMetadata
[ 33%] Built target nrrdLoadWithMetadata
[ 44%] Built target itkLoadWithMetadata
[ 55%] BUILDING MEX_FILE:
/Volumes/scratch/kent/CompressedSensingDWI/CompressedSensingDWI/mexFiles/it
kSaveWithMetadataStub.cxx
[ 66%] BUILDING MEX_FILE:
/Volumes/scratch/kent/CompressedSensingDWI/CompressedSensingDWI/mexFiles/nr
rdLoadWithMetadataStub.cxx
[ 77%] BUILDING MEX_FILE:
/Volumes/scratch/kent/CompressedSensingDWI/CompressedSensingDWI/mexFiles/nr
rdSaveWithMetadataStub.cxx
[ 88%] BUILDING MEX_FILE:
/Volumes/scratch/kent/CompressedSensingDWI/CompressedSensingDWI/mexFiles/it
kLoadWithMetadataStub.cxx
Undefined symbols for architecture x86_64:
  "vnl_vector<char>::set_size(unsigned int)", referenced from:
      itk::Array<char>::SetSize(unsigned int) in
libITKIOHDF5-4.5.a(itkHDF5ImageIO.cxx.o)
  "vnl_vector<char>::vnl_vector(vnl_vector<char> const&)", referenced from:
      itk::Array<char>::Array(itk::Array<char> const&) in
libITKIOHDF5-4.5.a(itkHDF5ImageIO.cxx.o)
  "vnl_vector<char>::vnl_vector(unsigned int)", referenced from:
      itk::Array<char>::Array(unsigned int) in
libITKIOHDF5-4.5.a(itkHDF5ImageIO.cxx.o)
  "vnl_vector<char>::~vnl_vector()", referenced from:
      itk::Array<char>::~Array() in
libITKIOHDF5-4.5.a(itkHDF5ImageIO.cxx.o)
  "vnl_vector<char>::operator=(vnl_vector<char> const&)", referenced from:
      itk::Array<char>::operator=(itk::Array<char> const&) in
libITKIOHDF5-4.5.a(itkHDF5ImageIO.cxx.o)
  "vnl_vector<short>::set_size(unsigned int)", referenced from:
      itk::Array<short>::SetSize(unsigned int) in
libITKIOHDF5-4.5.a(itkHDF5ImageIO.cxx.o)
  "vnl_vector<short>::vnl_vector(vnl_vector<short> const&)", referenced
from:
      itk::Array<short>::Array(itk::Array<short> const&) in
libITKIOHDF5-4.5.a(itkHDF5ImageIO.cxx.o)
  "vnl_vector<short>::vnl_vector(unsigned int)", referenced from:
      itk::Array<short>::Array(unsigned int) in
libITKIOHDF5-4.5.a(itkHDF5ImageIO.cxx.o)
  "vnl_vector<short>::~vnl_vector()", referenced from:
      itk::Array<short>::~Array() in
libITKIOHDF5-4.5.a(itkHDF5ImageIO.cxx.o)
  "vnl_vector<short>::operator=(vnl_vector<short> const&)", referenced
from:
      itk::Array<short>::operator=(itk::Array<short> const&) in
libITKIOHDF5-4.5.a(itkHDF5ImageIO.cxx.o)
  "gdcm::DataElement::SetVLToUndefined()", referenced from:
      gdcm::ImageHelper::SetSpacingValue(gdcm::DataSet&,
std::vector<double, std::allocator<double> > const&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::SetDataElementInSQAsItemNumber(gdcm::DataSet&,
gdcm::DataElement const&, gdcm::Tag const&, unsigned int) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::ImageHelper::SetDirectionCosinesValue(gdcm::DataSet&,
std::vector<double, std::allocator<double> > const&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::ImageHelper::SetRescaleInterceptSlopeValue(gdcm::File&,
gdcm::Image const&) in libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::FileExplicitFilter::ProcessDataSet(gdcm::DataSet&, gdcm::Dicts
const&) in libitkgdcmMSFF-4.5.a(gdcmFileExplicitFilter.cxx.o)
      gdcm::PixmapWriter::PrepareWrite() in
libitkgdcmMSFF-4.5.a(gdcmPixmapWriter.cxx.o)
  "gdcm::MediaStorage::GetMSString(gdcm::MediaStorage::MSType)",
referenced from:
      gdcm::operator<<(std::ostream&, gdcm::MediaStorage const&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::PixmapReader::Read() in
libitkgdcmMSFF-4.5.a(gdcmPixmapReader.cxx.o)
      gdcm::PixmapWriter::PrepareWrite() in
libitkgdcmMSFF-4.5.a(gdcmPixmapWriter.cxx.o)
  "gdcm::MediaStorage::SetFromFile(gdcm::File const&)", referenced from:
      gdcm::ImageHelper::GetOriginValue(gdcm::File const&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::ImageHelper::GetDirectionCosinesValue(gdcm::File const&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::ImageHelper::GetRescaleInterceptSlopeValue(gdcm::File const&)
in libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::ImageHelper::GetSpacingValue(gdcm::File const&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::ImageHelper::SetRescaleInterceptSlopeValue(gdcm::File&,
gdcm::Image const&) in libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::ImageWriter::Write() in
libitkgdcmMSFF-4.5.a(gdcmImageWriter.cxx.o)
      gdcm::PixmapReader::Read() in
libitkgdcmMSFF-4.5.a(gdcmPixmapReader.cxx.o)
      ...
  "gdcm::MediaStorage::SetFromDataSet(gdcm::DataSet const&)", referenced
from:
      gdcm::ImageHelper::SetSpacingValue(gdcm::DataSet&,
std::vector<double, std::allocator<double> > const&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::ImageHelper::SetOriginValue(gdcm::DataSet&, gdcm::Image
const&) in libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::ImageHelper::SetDirectionCosinesValue(gdcm::DataSet&,
std::vector<double, std::allocator<double> > const&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
  "gdcm::MediaStorage::IsImage(gdcm::MediaStorage::MSType)", referenced
from:
      gdcm::ImageHelper::SetSpacingValue(gdcm::DataSet&,
std::vector<double, std::allocator<double> > const&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::ImageHelper::SetOriginValue(gdcm::DataSet&, gdcm::Image
const&) in libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::ImageHelper::SetDirectionCosinesValue(gdcm::DataSet&,
std::vector<double, std::allocator<double> > const&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::ImageHelper::SetRescaleInterceptSlopeValue(gdcm::File&,
gdcm::Image const&) in libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::PixmapReader::Read() in
libitkgdcmMSFF-4.5.a(gdcmPixmapReader.cxx.o)
      gdcm::PixmapReader::ReadImage(gdcm::MediaStorage const&) in
libitkgdcmMSFF-4.5.a(gdcmPixmapReader.cxx.o)
  "gdcm::MediaStorage::GetMSType(char const*)", referenced from:
      gdcm::PixmapReader::Read() in
libitkgdcmMSFF-4.5.a(gdcmPixmapReader.cxx.o)
  "gdcm::TransferSyntax::GetTSString(gdcm::TransferSyntax::TSType)",
referenced from:
      gdcm::operator<<(std::ostream&, gdcm::TransferSyntax const&) in
libitkgdcmMSFF-4.5.a(gdcmImage.cxx.o)
      gdcm::PixmapWriter::PrepareWrite() in
libitkgdcmMSFF-4.5.a(gdcmPixmapWriter.cxx.o)
  "gdcm::Unpacker12Bits::Unpack(char*, char const*, unsigned long)",
referenced from:
      gdcm::RAWCodec::Decode(gdcm::DataElement const&, gdcm::DataElement&)
in libitkgdcmMSFF-4.5.a(gdcmRAWCodec.cxx.o)
  "gdcm::SequenceOfItems::AddItem(gdcm::Item const&)", referenced from:
      gdcm::ImageHelper::SetSpacingValue(gdcm::DataSet&,
std::vector<double, std::allocator<double> > const&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::SetDataElementInSQAsItemNumber(gdcm::DataSet&,
gdcm::DataElement const&, gdcm::Tag const&, unsigned int) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::ImageHelper::SetDirectionCosinesValue(gdcm::DataSet&,
std::vector<double, std::allocator<double> > const&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::ImageHelper::SetRescaleInterceptSlopeValue(gdcm::File&,
gdcm::Image const&) in libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::PixmapWriter::DoIconImage(gdcm::DataSet&, gdcm::Pixmap const&)
in libitkgdcmMSFF-4.5.a(gdcmPixmapWriter.cxx.o)
      gdcm::PixmapWriter::PrepareWrite() in
libitkgdcmMSFF-4.5.a(gdcmPixmapWriter.cxx.o)
  "gdcm::SequenceOfItems::GetItem(unsigned long)", referenced from:
      gdcm::GetOriginValueFromSequence(gdcm::DataSet const&, gdcm::Tag
const&, std::vector<double, std::allocator<double> >&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::GetDirectionCosinesValueFromSequence(gdcm::DataSet const&,
gdcm::Tag const&, std::vector<double, std::allocator<double> >&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::GetInterceptSlopeValueFromSequence(gdcm::DataSet const&,
gdcm::Tag const&, std::vector<double, std::allocator<double> >&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::ComputeZSpacingFromIPP(gdcm::DataSet const&, double&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::GetSpacingValueFromSequence(gdcm::DataSet const&, gdcm::Tag
const&, std::vector<double, std::allocator<double> >&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::GetUltraSoundSpacingValueFromSequence(gdcm::DataSet const&,
std::vector<double, std::allocator<double> >&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::ImageHelper::SetSpacingValue(gdcm::DataSet&,
std::vector<double, std::allocator<double> > const&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      ...
  "gdcm::FileMetaInformation::FillFromDataSet(gdcm::DataSet const&)",
referenced from:
      gdcm::PixmapWriter::PrepareWrite() in
libitkgdcmMSFF-4.5.a(gdcmPixmapWriter.cxx.o)

"gdcm::FileMetaInformation::SetDataSetTransferSyntax(gdcm::TransferSyntax
const&)", referenced from:
      gdcm::PixmapWriter::PrepareWrite() in
libitkgdcmMSFF-4.5.a(gdcmPixmapWriter.cxx.o)
  "gdcm::FileMetaInformation::AppendImplementationClassUID(char const*)",
referenced from:
      itk::GDCMImageIO::Write(void const*) in
libITKIOGDCM-4.5.a(itkGDCMImageIO.cxx.o)
  "gdcm::FileMetaInformation::SetSourceApplicationEntityTitle(char
const*)", referenced from:
      itk::GDCMImageIO::Write(void const*) in
libITKIOGDCM-4.5.a(itkGDCMImageIO.cxx.o)
  "gdcm::SequenceOfFragments::AddFragment(gdcm::Fragment const&)",
referenced from:
      gdcm::JPEG2000Codec::Code(gdcm::DataElement const&,
gdcm::DataElement&) in libitkgdcmMSFF-4.5.a(gdcmJPEG2000Codec.cxx.o)
      gdcm::RLECodec::Code(gdcm::DataElement const&, gdcm::DataElement&)
in libitkgdcmMSFF-4.5.a(gdcmRLECodec.cxx.o)
      gdcm::JPEGCodec::Code(gdcm::DataElement const&, gdcm::DataElement&)
in libitkgdcmMSFF-4.5.a(gdcmJPEGCodec.cxx.o)
  "gdcm::VM::GetVMTypeFromLength(unsigned int, unsigned int)", referenced
from:
      gdcm::StringFilter::FromString(gdcm::Tag const&, char const*,
unsigned long) in libitkgdcmMSFF-4.5.a(gdcmStringFilter.cxx.o)
  "gdcm::VM::GetNumberOfElementsFromArray(char const*, unsigned int)",
referenced from:
      gdcm::StringFilter::FromString(gdcm::Tag const&, char const*,
unsigned long) in libitkgdcmMSFF-4.5.a(gdcmStringFilter.cxx.o)
  "gdcm::VR::GetVRString(gdcm::VR::VRType)", referenced from:
      gdcm::operator<<(std::ostream&, gdcm::VR const&) in
libITKIOGDCM-4.5.a(itkGDCMImageIO.cxx.o)
      gdcm::operator<<(std::ostream&, gdcm::VR const&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::operator<<(std::ostream&, gdcm::VR const&) in
libitkgdcmMSFF-4.5.a(gdcmImageWriter.cxx.o)
      gdcm::operator<<(std::ostream&, gdcm::VR const&) in
libitkgdcmMSFF-4.5.a(gdcmStringFilter.cxx.o)
      gdcm::operator<<(std::ostream&, gdcm::VR const&) in
libitkgdcmMSFF-4.5.a(gdcmFileExplicitFilter.cxx.o)
      gdcm::operator<<(std::ostream&, gdcm::VR const&) in
libitkgdcmMSFF-4.5.a(gdcmPixmapWriter.cxx.o)
  "gdcm::VR::IsASCII(gdcm::VR::VRType)", referenced from:
      gdcm::StringFilter::ToStringPair(gdcm::Tag const&, gdcm::DataSet
const&) const in libitkgdcmMSFF-4.5.a(gdcmStringFilter.cxx.o)
      gdcm::StringFilter::FromString(gdcm::Tag const&, char const*,
unsigned long) in libitkgdcmMSFF-4.5.a(gdcmStringFilter.cxx.o)
  "gdcm::Tag::ReadFromPipeSeparatedString(char const*)", referenced from:
      itk::GDCMImageIO::Write(void const*) in
libITKIOGDCM-4.5.a(itkGDCMImageIO.cxx.o)
      itk::GDCMImageIO::GetLabelFromTag(std::string const&, std::string&)
in libITKIOGDCM-4.5.a(itkGDCMImageIO.cxx.o)
  "gdcm::Defs::LoadFromFile(char const*)", referenced from:
      gdcm::Global::LoadResourcesFiles() in
libitkgdcmDICT-4.5.a(gdcmGlobal.cxx.o)
  "gdcm::Defs::Defs()", referenced from:
      gdcm::GlobalInternal::GlobalInternal() in
libitkgdcmDICT-4.5.a(gdcmGlobal.cxx.o)
  "gdcm::Defs::~Defs()", referenced from:
      gdcm::GlobalInternal::~GlobalInternal() in
libitkgdcmDICT-4.5.a(gdcmGlobal.cxx.o)
      gdcm::GlobalInternal::GlobalInternal() in
libitkgdcmDICT-4.5.a(gdcmGlobal.cxx.o)
  "gdcm::Trace::GetDebugFile()", referenced from:
      gdcm::FileMetaInformation::Insert(gdcm::DataElement const&) in
libITKIOGDCM-4.5.a(itkGDCMImageIO.cxx.o)
      gdcm::DataSet::Insert(gdcm::DataElement const&) in
libITKIOGDCM-4.5.a(itkGDCMImageIO.cxx.o)
      gdcm::PixelFormat::SetSamplesPerPixel(unsigned short) in
libITKIOGDCM-4.5.a(itkGDCMImageIO.cxx.o)
      gdcm::DataSet::InsertDataElement(gdcm::DataElement const&) in
libITKIOGDCM-4.5.a(itkGDCMImageIO.cxx.o)
      gdcm::ByteValue::ByteValue(char const*, gdcm::VL const&) in
libITKIOGDCM-4.5.a(itkGDCMImageIO.cxx.o)
      gdcm::ByteValue::SetLength(gdcm::VL) in
libITKIOGDCM-4.5.a(itkGDCMImageIO.cxx.o)
      gdcm::ComputeZSpacingFromIPP(gdcm::DataSet const&, double&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      ...
  "gdcm::Trace::GetDebugFlag()", referenced from:
      gdcm::ByteValue::ByteValue(char const*, gdcm::VL const&) in
libITKIOGDCM-4.5.a(itkGDCMImageIO.cxx.o)
      gdcm::ByteValue::SetLength(gdcm::VL) in
libITKIOGDCM-4.5.a(itkGDCMImageIO.cxx.o)
      gdcm::ImageHelper::GetSpacingTagFromMediaStorage(gdcm::MediaStorage
const&) in libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::ImageHelper::GetZSpacingTagFromMediaStorage(gdcm::MediaStorage
const&) in libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::ByteValue::ByteValue(char const*, gdcm::VL const&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::ByteValue::SetLength(gdcm::VL) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::ByteValue::ByteValue(char const*, gdcm::VL const&) in
libitkgdcmMSFF-4.5.a(gdcmImageWriter.cxx.o)
      ...
  "gdcm::Trace::GetErrorFlag()", referenced from:
      gdcm::FileMetaInformation::Insert(gdcm::DataElement const&) in
libITKIOGDCM-4.5.a(itkGDCMImageIO.cxx.o)
      gdcm::DataSet::Insert(gdcm::DataElement const&) in
libITKIOGDCM-4.5.a(itkGDCMImageIO.cxx.o)
      gdcm::ComputeZSpacingFromIPP(gdcm::DataSet const&, double&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::ImageHelper::GetDirectionCosinesValue(gdcm::File const&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::DataSet::Insert(gdcm::DataElement const&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::DataSet::Insert(gdcm::DataElement const&) in
libitkgdcmMSFF-4.5.a(gdcmImageWriter.cxx.o)
      gdcm::PixelFormat::GetScalarType() const in
libitkgdcmMSFF-4.5.a(gdcmPixelFormat.cxx.o)
      ...
  "gdcm::Trace::GetDebugToFile()", referenced from:
      gdcm::FileMetaInformation::Insert(gdcm::DataElement const&) in
libITKIOGDCM-4.5.a(itkGDCMImageIO.cxx.o)
      gdcm::DataSet::Insert(gdcm::DataElement const&) in
libITKIOGDCM-4.5.a(itkGDCMImageIO.cxx.o)
      gdcm::PixelFormat::SetSamplesPerPixel(unsigned short) in
libITKIOGDCM-4.5.a(itkGDCMImageIO.cxx.o)
      gdcm::DataSet::InsertDataElement(gdcm::DataElement const&) in
libITKIOGDCM-4.5.a(itkGDCMImageIO.cxx.o)
      gdcm::ByteValue::ByteValue(char const*, gdcm::VL const&) in
libITKIOGDCM-4.5.a(itkGDCMImageIO.cxx.o)
      gdcm::ByteValue::SetLength(gdcm::VL) in
libITKIOGDCM-4.5.a(itkGDCMImageIO.cxx.o)
      gdcm::ComputeZSpacingFromIPP(gdcm::DataSet const&, double&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      ...
  "gdcm::Trace::GetWarningFlag()", referenced from:
      gdcm::DataSet::InsertDataElement(gdcm::DataElement const&) in
libITKIOGDCM-4.5.a(itkGDCMImageIO.cxx.o)
      gdcm::ComputeZSpacingFromIPP(gdcm::DataSet const&, double&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::ImageHelper::GetDirectionCosinesFromDataSet(gdcm::DataSet
const&, std::vector<double, std::allocator<double> >&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::ImageHelper::GetDirectionCosinesValue(gdcm::File const&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::GetRescaleInterceptSlopeValueFromDataSet(gdcm::DataSet const&,
std::vector<double, std::allocator<double> >&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::ImageHelper::GetSpacingTagFromMediaStorage(gdcm::MediaStorage
const&) in libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::ImageHelper::GetZSpacingTagFromMediaStorage(gdcm::MediaStorage
const&) in libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      ...
  "gdcm::Reader::Read()", referenced from:
      gdcm::PixmapReader::Read() in
libitkgdcmMSFF-4.5.a(gdcmPixmapReader.cxx.o)
  "gdcm::Reader::~Reader()", referenced from:
      gdcm::PixmapReader::PixmapReader() in
libitkgdcmMSFF-4.5.a(gdcmPixmapReader.cxx.o)
      gdcm::PixmapReader::~PixmapReader() in
libitkgdcmMSFF-4.5.a(gdcmPixmapReader.cxx.o)
  "gdcm::System::FileExists(char const*)", referenced from:
      gdcm::Global::Locate(char const*) const in
libitkgdcmDICT-4.5.a(gdcmGlobal.cxx.o)
  "gdcm::System::StrCaseCmp(char const*, char const*)", referenced from:
      gdcm::PrivateTag::operator<(gdcm::PrivateTag const&) const in
libitkgdcmDICT-4.5.a(gdcmDicts.cxx.o)
      gdcm::PrivateTag::operator<(gdcm::PrivateTag const&) const in
libitkgdcmDICT-4.5.a(gdcmPrivateDefaultDicts.cxx.o)
  "gdcm::System::EncodeBytes(char*, unsigned char const*, int)",
referenced from:
      gdcm::UIDGenerator::Generate2() in
libitkgdcmMSFF-4.5.a(gdcmUIDGenerator.cxx.o)
      gdcm::UIDGenerator::Generate() in
libitkgdcmMSFF-4.5.a(gdcmUIDGenerator.cxx.o)
  "gdcm::System::FileIsDirectory(char const*)", referenced from:
      gdcm::Global::Append(char const*) in
libitkgdcmDICT-4.5.a(gdcmGlobal.cxx.o)
      gdcm::Global::Prepend(char const*) in
libitkgdcmDICT-4.5.a(gdcmGlobal.cxx.o)
  "gdcm::System::GetCurrentDateTime(char*)", referenced from:
      gdcm::ImageWriter::Write() in
libitkgdcmMSFF-4.5.a(gdcmImageWriter.cxx.o)
      gdcm::UIDGenerator::Generate2() in
libitkgdcmMSFF-4.5.a(gdcmUIDGenerator.cxx.o)
  "gdcm::System::GetHardwareAddress(unsigned char*)", referenced from:
      gdcm::UIDGenerator::Generate2() in
libitkgdcmMSFF-4.5.a(gdcmUIDGenerator.cxx.o)
  "gdcm::System::GetCurrentProcessFileName()", referenced from:
      gdcm::GlobalInternal::LoadDefaultPaths() in
libitkgdcmDICT-4.5.a(gdcmGlobal.cxx.o)
  "gdcm::System::GetCurrentResourcesDirectory()", referenced from:
      gdcm::GlobalInternal::LoadDefaultPaths() in
libitkgdcmDICT-4.5.a(gdcmGlobal.cxx.o)
  "gdcm::Writer::Write()", referenced from:
      gdcm::ImageWriter::Write() in
libitkgdcmMSFF-4.5.a(gdcmImageWriter.cxx.o)
      gdcm::PixmapWriter::Write() in
libitkgdcmMSFF-4.5.a(gdcmPixmapWriter.cxx.o)
  "gdcm::Writer::~Writer()", referenced from:
      gdcm::PixmapWriter::PixmapWriter() in
libitkgdcmMSFF-4.5.a(gdcmPixmapWriter.cxx.o)
      gdcm::PixmapWriter::~PixmapWriter() in
libitkgdcmMSFF-4.5.a(gdcmPixmapWriter.cxx.o)
  "gdcm::Filename::GetPath()", referenced from:
      gdcm::GlobalInternal::LoadDefaultPaths() in
libitkgdcmDICT-4.5.a(gdcmGlobal.cxx.o)
  "gdcm::Preamble::Preamble()", referenced from:
      gdcm::FileMetaInformation::FileMetaInformation() in
libITKIOGDCM-4.5.a(itkGDCMImageIO.cxx.o)
      gdcm::FileMetaInformation::FileMetaInformation() in
libitkgdcmMSFF-4.5.a(gdcmStringFilter.cxx.o)
      gdcm::FileMetaInformation::FileMetaInformation() in
libitkgdcmMSFF-4.5.a(gdcmPixmapReader.cxx.o)
      gdcm::FileMetaInformation::FileMetaInformation() in
libitkgdcmMSFF-4.5.a(gdcmPixmapWriter.cxx.o)
  "gdcm::Preamble::~Preamble()", referenced from:
      gdcm::FileMetaInformation::~FileMetaInformation() in
libITKIOGDCM-4.5.a(itkGDCMImageIO.cxx.o)
      gdcm::FileMetaInformation::~FileMetaInformation() in
libitkgdcmMSFF-4.5.a(gdcmStringFilter.cxx.o)
      gdcm::FileMetaInformation::~FileMetaInformation() in
libitkgdcmMSFF-4.5.a(gdcmPixmapReader.cxx.o)
      gdcm::FileMetaInformation::~FileMetaInformation() in
libitkgdcmMSFF-4.5.a(gdcmPixmapWriter.cxx.o)
  "gdcm::DataElement::GetValueAsSQ() const", referenced from:
      gdcm::GetOriginValueFromSequence(gdcm::DataSet const&, gdcm::Tag
const&, std::vector<double, std::allocator<double> >&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::GetDirectionCosinesValueFromSequence(gdcm::DataSet const&,
gdcm::Tag const&, std::vector<double, std::allocator<double> >&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::GetInterceptSlopeValueFromSequence(gdcm::DataSet const&,
gdcm::Tag const&, std::vector<double, std::allocator<double> >&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::ComputeZSpacingFromIPP(gdcm::DataSet const&, double&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::GetSpacingValueFromSequence(gdcm::DataSet const&, gdcm::Tag
const&, std::vector<double, std::allocator<double> >&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::GetUltraSoundSpacingValueFromSequence(gdcm::DataSet const&,
std::vector<double, std::allocator<double> >&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::ImageHelper::SetSpacingValue(gdcm::DataSet&,
std::vector<double, std::allocator<double> > const&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      ...
  "gdcm::DataElement::GetSequenceOfFragments() const", referenced from:
      gdcm::FileExplicitFilter::ProcessDataSet(gdcm::DataSet&, gdcm::Dicts
const&) in libitkgdcmMSFF-4.5.a(gdcmFileExplicitFilter.cxx.o)
      gdcm::Bitmap::TryJPEGCodec(char*, bool&) const in
libitkgdcmMSFF-4.5.a(gdcmBitmap.cxx.o)
      gdcm::Bitmap::TryJPEGLSCodec(char*, bool&) const in
libitkgdcmMSFF-4.5.a(gdcmBitmap.cxx.o)
      gdcm::Bitmap::TryJPEG2000Codec(char*, bool&) const in
libitkgdcmMSFF-4.5.a(gdcmBitmap.cxx.o)
      gdcm::PixmapReader::ReadImage(gdcm::MediaStorage const&) in
libitkgdcmMSFF-4.5.a(gdcmPixmapReader.cxx.o)
      gdcm::JPEG2000Codec::Decode(gdcm::DataElement const&,
gdcm::DataElement&) in libitkgdcmMSFF-4.5.a(gdcmJPEG2000Codec.cxx.o)
      gdcm::RLECodec::Decode(gdcm::DataElement const&, gdcm::DataElement&)
in libitkgdcmMSFF-4.5.a(gdcmRLECodec.cxx.o)
      ...
  "gdcm::MediaStorage::GetModality() const", referenced from:
      gdcm::ImageWriter::Write() in
libitkgdcmMSFF-4.5.a(gdcmImageWriter.cxx.o)
  "gdcm::TransferSyntax::IsExplicit() const", referenced from:
      gdcm::ImageApplyLookupTable::Apply() in
libitkgdcmMSFF-4.5.a(gdcmImageApplyLookupTable.cxx.o)
      gdcm::PixmapWriter::DoIconImage(gdcm::DataSet&, gdcm::Pixmap const&)
in libitkgdcmMSFF-4.5.a(gdcmPixmapWriter.cxx.o)
      gdcm::PixmapWriter::PrepareWrite() in
libitkgdcmMSFF-4.5.a(gdcmPixmapWriter.cxx.o)
  "gdcm::TransferSyntax::IsImplicit() const", referenced from:
      gdcm::ImageApplyLookupTable::Apply() in
libitkgdcmMSFF-4.5.a(gdcmImageApplyLookupTable.cxx.o)
      gdcm::ImageChangePlanarConfiguration::Change() in
libitkgdcmMSFF-4.5.a(gdcmImageChangePlanarConfiguration.cxx.o)
      gdcm::PixmapWriter::DoIconImage(gdcm::DataSet&, gdcm::Pixmap const&)
in libitkgdcmMSFF-4.5.a(gdcmPixmapWriter.cxx.o)
      gdcm::PixmapWriter::PrepareWrite() in
libitkgdcmMSFF-4.5.a(gdcmPixmapWriter.cxx.o)
  "gdcm::TransferSyntax::IsLossless() const", referenced from:
      gdcm::JPEG2000Codec::GetHeaderInfo(char const*, unsigned long,
gdcm::TransferSyntax&) in libitkgdcmMSFF-4.5.a(gdcmJPEG2000Codec.cxx.o)
  "gdcm::TransferSyntax::IsEncapsulated() const", referenced from:
      gdcm::ImageChangeTransferSyntax::Change() in
libitkgdcmMSFF-4.5.a(gdcmImageChangeTransferSyntax.cxx.o)
  "gdcm::TransferSyntax::IsLossy() const", referenced from:
      gdcm::ImageChangeTransferSyntax::Change() in
libitkgdcmMSFF-4.5.a(gdcmImageChangeTransferSyntax.cxx.o)
      gdcm::Bitmap::TryKAKADUCodec(char*, bool&) const in
libitkgdcmMSFF-4.5.a(gdcmBitmap.cxx.o)
      gdcm::Bitmap::TryJPEGLSCodec(char*, bool&) const in
libitkgdcmMSFF-4.5.a(gdcmBitmap.cxx.o)
      gdcm::Bitmap::TryJPEG2000Codec(char*, bool&) const in
libitkgdcmMSFF-4.5.a(gdcmBitmap.cxx.o)
      gdcm::PixmapWriter::PrepareWrite() in
libitkgdcmMSFF-4.5.a(gdcmPixmapWriter.cxx.o)
      gdcm::JPEG2000Codec::GetHeaderInfo(char const*, unsigned long,
gdcm::TransferSyntax&) in libitkgdcmMSFF-4.5.a(gdcmJPEG2000Codec.cxx.o)
  "gdcm::ExplicitDataElement::GetLength() const", referenced from:
      gdcm::VL gdcm::DataElement::GetLength<gdcm::ExplicitDataElement>()
const in libitkgdcmMSFF-4.5.a(gdcmFileExplicitFilter.cxx.o)
  "gdcm::FileMetaInformation::GetMediaStorage() const", referenced from:
      gdcm::PixmapReader::Read() in
libitkgdcmMSFF-4.5.a(gdcmPixmapReader.cxx.o)
  "gdcm::SequenceOfFragments::GetFragment(unsigned long) const",
referenced from:
      gdcm::Bitmap::TryJPEGCodec(char*, bool&) const in
libitkgdcmMSFF-4.5.a(gdcmBitmap.cxx.o)
      gdcm::Bitmap::TryJPEGLSCodec(char*, bool&) const in
libitkgdcmMSFF-4.5.a(gdcmBitmap.cxx.o)
      gdcm::Bitmap::TryJPEG2000Codec(char*, bool&) const in
libitkgdcmMSFF-4.5.a(gdcmBitmap.cxx.o)
      gdcm::JPEG2000Codec::Decode(gdcm::DataElement const&,
gdcm::DataElement&) in libitkgdcmMSFF-4.5.a(gdcmJPEG2000Codec.cxx.o)
      gdcm::RLECodec::Decode(gdcm::DataElement const&, gdcm::DataElement&)
in libitkgdcmMSFF-4.5.a(gdcmRLECodec.cxx.o)
      gdcm::JPEGCodec::Decode(gdcm::DataElement const&,
gdcm::DataElement&) in libitkgdcmMSFF-4.5.a(gdcmJPEGCodec.cxx.o)
  "gdcm::SequenceOfFragments::WriteBuffer(std::ostream&) const",
referenced from:
      gdcm::PixmapReader::ReadImage(gdcm::MediaStorage const&) in
libitkgdcmMSFF-4.5.a(gdcmPixmapReader.cxx.o)
      gdcm::RLECodec::Decode(gdcm::DataElement const&, gdcm::DataElement&)
in libitkgdcmMSFF-4.5.a(gdcmRLECodec.cxx.o)
  "gdcm::SequenceOfFragments::ComputeByteLength() const", referenced from:
      gdcm::JPEG2000Codec::Decode(gdcm::DataElement const&,
gdcm::DataElement&) in libitkgdcmMSFF-4.5.a(gdcmJPEG2000Codec.cxx.o)
  "gdcm::SequenceOfFragments::GetNumberOfFragments() const", referenced
from:
      gdcm::JPEG2000Codec::Decode(gdcm::DataElement const&,
gdcm::DataElement&) in libitkgdcmMSFF-4.5.a(gdcmJPEG2000Codec.cxx.o)
      gdcm::JPEG2000Codec::Code(gdcm::DataElement const&,
gdcm::DataElement&) in libitkgdcmMSFF-4.5.a(gdcmJPEG2000Codec.cxx.o)
      gdcm::RLECodec::Decode(gdcm::DataElement const&, gdcm::DataElement&)
in libitkgdcmMSFF-4.5.a(gdcmRLECodec.cxx.o)
      gdcm::JPEGCodec::Decode(gdcm::DataElement const&,
gdcm::DataElement&) in libitkgdcmMSFF-4.5.a(gdcmJPEGCodec.cxx.o)
      gdcm::JPEGCodec::Code(gdcm::DataElement const&, gdcm::DataElement&)
in libitkgdcmMSFF-4.5.a(gdcmJPEGCodec.cxx.o)
  "gdcm::SequenceOfFragments::GetBuffer(char*, unsigned long) const",
referenced from:
      gdcm::JPEG2000Codec::Decode(gdcm::DataElement const&,
gdcm::DataElement&) in libitkgdcmMSFF-4.5.a(gdcmJPEG2000Codec.cxx.o)
  "gdcm::VM::Compatible(gdcm::VM const&) const", referenced from:
      gdcm::StringFilter::FromString(gdcm::Tag const&, char const*,
unsigned long) in libitkgdcmMSFF-4.5.a(gdcmStringFilter.cxx.o)
  "gdcm::VM::GetLength() const", referenced from:
      gdcm::ImageHelper::GetSpacingValue(gdcm::File const&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::ImageHelper::SetSpacingValue(gdcm::DataSet&,
std::vector<double, std::allocator<double> > const&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::StringFilter::FromString(gdcm::Tag const&, char const*,
unsigned long) in libitkgdcmMSFF-4.5.a(gdcmStringFilter.cxx.o)
  "gdcm::VR::Compatible(gdcm::VR const&) const", referenced from:
      gdcm::ImageHelper::GetSpacingValue(gdcm::File const&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::Attribute<(unsigned short)32, (unsigned short)50, 32,
4>::SetFromDataElement(gdcm::DataElement const&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::Attribute<(unsigned short)32, (unsigned short)55, 32,
32>::SetFromDataElement(gdcm::DataElement const&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::Attribute<(unsigned short)40, (unsigned short)4178, 32,
1>::SetFromDataElement(gdcm::DataElement const&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::Attribute<(unsigned short)40, (unsigned short)4179, 32,
1>::SetFromDataElement(gdcm::DataElement const&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::Attribute<(unsigned short)40, (unsigned short)48, 32,
2>::SetFromDataElement(gdcm::DataElement const&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::Attribute<(unsigned short)24, (unsigned short)24620, 128,
1>::SetFromDataElement(gdcm::DataElement const&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      ...
  "gdcm::VR::IsDual() const", referenced from:
      gdcm::StringFilter::ToStringPair(gdcm::Tag const&, gdcm::DataSet
const&) const in libitkgdcmMSFF-4.5.a(gdcmStringFilter.cxx.o)
      gdcm::StringFilter::FromString(gdcm::Tag const&, char const*,
unsigned long) in libitkgdcmMSFF-4.5.a(gdcmStringFilter.cxx.o)
  "gdcm::VR::IsVRFile() const", referenced from:
      itk::GDCMImageIO::Write(void const*) in
libITKIOGDCM-4.5.a(itkGDCMImageIO.cxx.o)
      gdcm::DataSetHelper::ComputeVR(gdcm::File const&, gdcm::DataSet
const&, gdcm::Tag const&) in libitkgdcmMSFF-4.5.a(gdcmDataSetHelper.cxx.o)
  "gdcm::VR::GetSizeof() const", referenced from:
      gdcm::ImageHelper::GetSpacingValue(gdcm::File const&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::ImageHelper::SetSpacingValue(gdcm::DataSet&,
std::vector<double, std::allocator<double> > const&) in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::StringFilter::FromString(gdcm::Tag const&, char const*,
unsigned long) in libitkgdcmMSFF-4.5.a(gdcmStringFilter.cxx.o)
  "gdcm::Tag::PrintAsPipeSeparatedString() const", referenced from:

itk::GDCMImageIO::InternalReadImageInformation(std::basic_ifstream<char,
std::char_traits<char> >&) in libITKIOGDCM-4.5.a(itkGDCMImageIO.cxx.o)
  "gdcm::DataSet::GetPrivateCreator(gdcm::Tag const&) const", referenced
from:
      gdcm::StringFilter::ToStringPair(gdcm::Tag const&, gdcm::DataSet
const&) const in libitkgdcmMSFF-4.5.a(gdcmStringFilter.cxx.o)
      gdcm::StringFilter::FromString(gdcm::Tag const&, char const*,
unsigned long) in libitkgdcmMSFF-4.5.a(gdcmStringFilter.cxx.o)
      gdcm::DataSetHelper::ComputeVR(gdcm::File const&, gdcm::DataSet
const&, gdcm::Tag const&) in libitkgdcmMSFF-4.5.a(gdcmDataSetHelper.cxx.o)
      gdcm::FileExplicitFilter::ProcessDataSet(gdcm::DataSet&, gdcm::Dicts
const&) in libitkgdcmMSFF-4.5.a(gdcmFileExplicitFilter.cxx.o)
  "gdcm::DataSet::GetDEEnd() const", referenced from:
      gdcm::DataSet::GetDataElement(gdcm::Tag const&) const in
libitkgdcmMSFF-4.5.a(gdcmImageHelper.cxx.o)
      gdcm::DataSet::GetDataElement(gdcm::Tag const&) const in
libitkgdcmMSFF-4.5.a(gdcmImageReader.cxx.o)
      gdcm::DataSet::GetDataElement(gdcm::Tag const&) const in
libitkgdcmMSFF-4.5.a(gdcmImageWriter.cxx.o)
      gdcm::DataSet::GetDataElement(gdcm::Tag const&) const in
libitkgdcmMSFF-4.5.a(gdcmStringFilter.cxx.o)
      gdcm::DataSet::GetDataElement(gdcm::Tag const&) const in
libitkgdcmMSFF-4.5.a(gdcmDataSetHelper.cxx.o)
      gdcm::DataSet::FindNextDataElement(gdcm::Tag const&) const in
libitkgdcmMSFF-4.5.a(gdcmCurve.cxx.o)
      gdcm::DataSet::GetDataElement(gdcm::Tag const&) const in
libitkgdcmMSFF-4.5.a(gdcmCurve.cxx.o)
      ...
  "typeinfo for gdcm::Reader", referenced from:
      typeinfo for gdcm::PixmapReader in
libitkgdcmMSFF-4.5.a(gdcmPixmapReader.cxx.o)
  "typeinfo for gdcm::Writer", referenced from:
      typeinfo for gdcm::PixmapWriter in
libitkgdcmMSFF-4.5.a(gdcmPixmapWriter.cxx.o)
  "vtable for gdcm::SequenceOfFragments", referenced from:
      gdcm::SequenceOfFragments::SequenceOfFragments() in
libitkgdcmMSFF-4.5.a(gdcmJPEG2000Codec.cxx.o)
      gdcm::SequenceOfFragments::SequenceOfFragments() in
libitkgdcmMSFF-4.5.a(gdcmRLECodec.cxx.o)
      gdcm::SequenceOfFragments::SequenceOfFragments() in
libitkgdcmMSFF-4.5.a(gdcmJPEGCodec.cxx.o)
  NOTE: a missing vtable usually means the first non-inline virtual member
function has no definition.
  "vtable for gdcm::Reader", referenced from:
      gdcm::Reader::Reader() in
libitkgdcmMSFF-4.5.a(gdcmPixmapReader.cxx.o)
  NOTE: a missing vtable usually means the first non-inline virtual member
function has no definition.
  "vtable for gdcm::Writer", referenced from:
      gdcm::Writer::Writer() in
libitkgdcmMSFF-4.5.a(gdcmPixmapWriter.cxx.o)
  NOTE: a missing vtable usually means the first non-inline virtual member
function has no definition.
  "_gdcmjpeg12_jpeg_CreateCompress", referenced from:
      gdcm::JPEG12Codec::InternalCode(char const*, unsigned long,
std::ostream&) in libitkgdcmMSFF-4.5.a(gdcmJPEG12Codec.cxx.o)
  "_gdcmjpeg12_jpeg_CreateDecompress", referenced from:
      gdcm::JPEG12Codec::GetHeaderInfo(std::istream&,
gdcm::TransferSyntax&) in libitkgdcmMSFF-4.5.a(gdcmJPEG12Codec.cxx.o)
      gdcm::JPEG12Codec::DecodeByStreams(std::istream&, std::ostream&) in
libitkgdcmMSFF-4.5.a(gdcmJPEG12Codec.cxx.o)
  "_gdcmjpeg12_jpeg_destroy_compress", referenced from:
      gdcm::JPEG12Codec::InternalCode(char const*, unsigned long,
std::ostream&) in libitkgdcmMSFF-4.5.a(gdcmJPEG12Codec.cxx.o)
  "_gdcmjpeg12_jpeg_destroy_decompress", referenced from:
      gdcm::JPEG12Codec::GetHeaderInfo(std::istream&,
gdcm::TransferSyntax&) in libitkgdcmMSFF-4.5.a(gdcmJPEG12Codec.cxx.o)
      gdcm::JPEG12Codec::DecodeByStreams(std::istream&, std::ostream&) in
libitkgdcmMSFF-4.5.a(gdcmJPEG12Codec.cxx.o)
  "_gdcmjpeg12_jpeg_finish_compress", referenced from:
      gdcm::JPEG12Codec::InternalCode(char const*, unsigned long,
std::ostream&) in libitkgdcmMSFF-4.5.a(gdcmJPEG12Codec.cxx.o)
  "_gdcmjpeg12_jpeg_finish_decompress", referenced from:
      gdcm::JPEG12Codec::DecodeByStreams(std::istream&, std::ostream&) in
libitkgdcmMSFF-4.5.a(gdcmJPEG12Codec.cxx.o)
  "_gdcmjpeg12_jpeg_read_header", referenced from:
      gdcm::JPEG12Codec::GetHeaderInfo(std::istream&,
gdcm::TransferSyntax&) in libitkgdcmMSFF-4.5.a(gdcmJPEG12Codec.cxx.o)
      gdcm::JPEG12Codec::DecodeByStreams(std::istream&, std::ostream&) in
libitkgdcmMSFF-4.5.a(gdcmJPEG12Codec.cxx.o)
  "_gdcmjpeg12_jpeg_read_scanlines", referenced from:
      gdcm::JPEG12Codec::DecodeByStreams(std::istream&, std::ostream&) in
libitkgdcmMSFF-4.5.a(gdcmJPEG12Codec.cxx.o)
  "_gdcmjpeg12_jpeg_resync_to_restart", referenced from:
      gdcm::gdcmjpeg12_jpeg_stdio_src(jpeg_decompress_struct*,
std::istream&, bool) in libitkgdcmMSFF-4.5.a(gdcmJPEG12Codec.cxx.o)
  "_gdcmjpeg12_jpeg_set_defaults", referenced from:
      gdcm::JPEG12Codec::InternalCode(char const*, unsigned long,
std::ostream&) in libitkgdcmMSFF-4.5.a(gdcmJPEG12Codec.cxx.o)
  "_gdcmjpeg12_jpeg_set_quality", referenced from:
      gdcm::JPEG12Codec::InternalCode(char const*, unsigned long,
std::ostream&) in libitkgdcmMSFF-4.5.a(gdcmJPEG12Codec.cxx.o)
  "_gdcmjpeg12_jpeg_simple_lossless", referenced from:
      gdcm::JPEG12Codec::InternalCode(char const*, unsigned long,
std::ostream&) in libitkgdcmMSFF-4.5.a(gdcmJPEG12Codec.cxx.o)
  "_gdcmjpeg12_jpeg_start_compress", referenced from:
      gdcm::JPEG12Codec::InternalCode(char const*, unsigned long,
std::ostream&) in libitkgdcmMSFF-4.5.a(gdcmJPEG12Codec.cxx.o)
  "_gdcmjpeg12_jpeg_start_decompress", referenced from:
      gdcm::JPEG12Codec::DecodeByStreams(std::istream&, std::ostream&) in
libitkgdcmMSFF-4.5.a(gdcmJPEG12Codec.cxx.o)
  "_gdcmjpeg12_jpeg_std_error", referenced from:
      gdcm::JPEG12Codec::GetHeaderInfo(std::istream&,
gdcm::TransferSyntax&) in libitkgdcmMSFF-4.5.a(gdcmJPEG12Codec.cxx.o)
      gdcm::JPEG12Codec::DecodeByStreams(std::istream&, std::ostream&) in
libitkgdcmMSFF-4.5.a(gdcmJPEG12Codec.cxx.o)
      gdcm::JPEG12Codec::InternalCode(char const*, unsigned long,
std::ostream&) in libitkgdcmMSFF-4.5.a(gdcmJPEG12Codec.cxx.o)
  "_gdcmjpeg12_jpeg_write_scanlines", referenced from:
      gdcm::JPEG12Codec::InternalCode(char const*, unsigned long,
std::ostream&) in libitkgdcmMSFF-4.5.a(gdcmJPEG12Codec.cxx.o)
  "_gdcmjpeg16_jpeg_CreateCompress", referenced from:
      gdcm::JPEG16Codec::InternalCode(char const*, unsigned long,
std::ostream&) in libitkgdcmMSFF-4.5.a(gdcmJPEG16Codec.cxx.o)
  "_gdcmjpeg16_jpeg_CreateDecompress", referenced from:
      gdcm::JPEG16Codec::GetHeaderInfo(std::istream&,
gdcm::TransferSyntax&) in libitkgdcmMSFF-4.5.a(gdcmJPEG16Codec.cxx.o)
      gdcm::JPEG16Codec::DecodeByStreams(std::istream&, std::ostream&) in
libitkgdcmMSFF-4.5.a(gdcmJPEG16Codec.cxx.o)
  "_gdcmjpeg16_jpeg_destroy_compress", referenced from:
      gdcm::JPEG16Codec::InternalCode(char const*, unsigned long,
std::ostream&) in libitkgdcmMSFF-4.5.a(gdcmJPEG16Codec.cxx.o)
  "_gdcmjpeg16_jpeg_destroy_decompress", referenced from:
      gdcm::JPEG16Codec::GetHeaderInfo(std::istream&,
gdcm::TransferSyntax&) in libitkgdcmMSFF-4.5.a(gdcmJPEG16Codec.cxx.o)
      gdcm::JPEG16Codec::DecodeByStreams(std::istream&, std::ostream&) in
libitkgdcmMSFF-4.5.a(gdcmJPEG16Codec.cxx.o)
  "_gdcmjpeg16_jpeg_finish_compress", referenced from:
      gdcm::JPEG16Codec::InternalCode(char const*, unsigned long,
std::ostream&) in libitkgdcmMSFF-4.5.a(gdcmJPEG16Codec.cxx.o)
  "_gdcmjpeg16_jpeg_finish_decompress", referenced from:
      gdcm::JPEG16Codec::DecodeByStreams(std::istream&, std::ostream&) in
libitkgdcmMSFF-4.5.a(gdcmJPEG16Codec.cxx.o)
  "_gdcmjpeg16_jpeg_read_header", referenced from:
      gdcm::JPEG16Codec::GetHeaderInfo(std::istream&,
gdcm::TransferSyntax&) in libitkgdcmMSFF-4.5.a(gdcmJPEG16Codec.cxx.o)
      gdcm::JPEG16Codec::DecodeByStreams(std::istream&, std::ostream&) in
libitkgdcmMSFF-4.5.a(gdcmJPEG16Codec.cxx.o)
  "_gdcmjpeg16_jpeg_read_scanlines", referenced from:
      gdcm::JPEG16Codec::DecodeByStreams(std::istream&, std::ostream&) in
libitkgdcmMSFF-4.5.a(gdcmJPEG16Codec.cxx.o)
  "_gdcmjpeg16_jpeg_resync_to_restart", referenced from:
      gdcm::gdcmjpeg16_jpeg_stdio_src(jpeg_decompress_struct*,
std::istream&, bool) in libitkgdcmMSFF-4.5.a(gdcmJPEG16Codec.cxx.o)
  "_gdcmjpeg16_jpeg_set_defaults", referenced from:
      gdcm::JPEG16Codec::InternalCode(char const*, unsigned long,
std::ostream&) in libitkgdcmMSFF-4.5.a(gdcmJPEG16Codec.cxx.o)
  "_gdcmjpeg16_jpeg_set_quality", referenced from:
      gdcm::JPEG16Codec::InternalCode(char const*, unsigned long,
std::ostream&) in libitkgdcmMSFF-4.5.a(gdcmJPEG16Codec.cxx.o)
  "_gdcmjpeg16_jpeg_simple_lossless", referenced from:
      gdcm::JPEG16Codec::InternalCode(char const*, unsigned long,
std::ostream&) in libitkgdcmMSFF-4.5.a(gdcmJPEG16Codec.cxx.o)
  "_gdcmjpeg16_jpeg_start_compress", referenced from:
      gdcm::JPEG16Codec::InternalCode(char const*, unsigned long,
std::ostream&) in libitkgdcmMSFF-4.5.a(gdcmJPEG16Codec.cxx.o)
  "_gdcmjpeg16_jpeg_start_decompress", referenced from:
      gdcm::JPEG16Codec::DecodeByStreams(std::istream&, std::ostream&) in
libitkgdcmMSFF-4.5.a(gdcmJPEG16Codec.cxx.o)
  "_gdcmjpeg16_jpeg_std_error", referenced from:
      gdcm::JPEG16Codec::GetHeaderInfo(std::istream&,
gdcm::TransferSyntax&) in libitkgdcmMSFF-4.5.a(gdcmJPEG16Codec.cxx.o)
      gdcm::JPEG16Codec::DecodeByStreams(std::istream&, std::ostream&) in
libitkgdcmMSFF-4.5.a(gdcmJPEG16Codec.cxx.o)
      gdcm::JPEG16Codec::InternalCode(char const*, unsigned long,
std::ostream&) in libitkgdcmMSFF-4.5.a(gdcmJPEG16Codec.cxx.o)
  "_gdcmjpeg16_jpeg_write_scanlines", referenced from:
      gdcm::JPEG16Codec::InternalCode(char const*, unsigned long,
std::ostream&) in libitkgdcmMSFF-4.5.a(gdcmJPEG16Codec.cxx.o)
  "_gdcmjpeg8_jpeg_CreateCompress", referenced from:
      gdcm::JPEG8Codec::InternalCode(char const*, unsigned long,
std::ostream&) in libitkgdcmMSFF-4.5.a(gdcmJPEG8Codec.cxx.o)
  "_gdcmjpeg8_jpeg_CreateDecompress", referenced from:
      gdcm::JPEG8Codec::GetHeaderInfo(std::istream&,
gdcm::TransferSyntax&) in libitkgdcmMSFF-4.5.a(gdcmJPEG8Codec.cxx.o)
      gdcm::JPEG8Codec::DecodeByStreams(std::istream&, std::ostream&) in
libitkgdcmMSFF-4.5.a(gdcmJPEG8Codec.cxx.o)
  "_gdcmjpeg8_jpeg_destroy_compress", referenced from:
      gdcm::JPEG8Codec::InternalCode(char const*, unsigned long,
std::ostream&) in libitkgdcmMSFF-4.5.a(gdcmJPEG8Codec.cxx.o)
  "_gdcmjpeg8_jpeg_destroy_decompress", referenced from:
      gdcm::JPEG8Codec::GetHeaderInfo(std::istream&,
gdcm::TransferSyntax&) in libitkgdcmMSFF-4.5.a(gdcmJPEG8Codec.cxx.o)
      gdcm::JPEG8Codec::DecodeByStreams(std::istream&, std::ostream&) in
libitkgdcmMSFF-4.5.a(gdcmJPEG8Codec.cxx.o)
  "_gdcmjpeg8_jpeg_finish_compress", referenced from:
      gdcm::JPEG8Codec::InternalCode(char const*, unsigned long,
std::ostream&) in libitkgdcmMSFF-4.5.a(gdcmJPEG8Codec.cxx.o)
  "_gdcmjpeg8_jpeg_finish_decompress", referenced from:
      gdcm::JPEG8Codec::DecodeByStreams(std::istream&, std::ostream&) in
libitkgdcmMSFF-4.5.a(gdcmJPEG8Codec.cxx.o)
  "_gdcmjpeg8_jpeg_read_header", referenced from:
      gdcm::JPEG8Codec::GetHeaderInfo(std::istream&,
gdcm::TransferSyntax&) in libitkgdcmMSFF-4.5.a(gdcmJPEG8Codec.cxx.o)
      gdcm::JPEG8Codec::DecodeByStreams(std::istream&, std::ostream&) in
libitkgdcmMSFF-4.5.a(gdcmJPEG8Codec.cxx.o)
  "_gdcmjpeg8_jpeg_read_scanlines", referenced from:
      gdcm::JPEG8Codec::DecodeByStreams(std::istream&, std::ostream&) in
libitkgdcmMSFF-4.5.a(gdcmJPEG8Codec.cxx.o)
  "_gdcmjpeg8_jpeg_resync_to_restart", referenced from:
      gdcm::gdcmjpeg8_jpeg_stdio_src(jpeg_decompress_struct*,
std::istream&, bool) in libitkgdcmMSFF-4.5.a(gdcmJPEG8Codec.cxx.o)
  "_gdcmjpeg8_jpeg_set_defaults", referenced from:
      gdcm::JPEG8Codec::InternalCode(char const*, unsigned long,
std::ostream&) in libitkgdcmMSFF-4.5.a(gdcmJPEG8Codec.cxx.o)
  "_gdcmjpeg8_jpeg_set_quality", referenced from:
      gdcm::JPEG8Codec::InternalCode(char const*, unsigned long,
std::ostream&) in libitkgdcmMSFF-4.5.a(gdcmJPEG8Codec.cxx.o)
  "_gdcmjpeg8_jpeg_simple_lossless", referenced from:
      gdcm::JPEG8Codec::InternalCode(char const*, unsigned long,
std::ostream&) in libitkgdcmMSFF-4.5.a(gdcmJPEG8Codec.cxx.o)
  "_gdcmjpeg8_jpeg_start_compress", referenced from:
      gdcm::JPEG8Codec::InternalCode(char const*, unsigned long,
std::ostream&) in libitkgdcmMSFF-4.5.a(gdcmJPEG8Codec.cxx.o)
  "_gdcmjpeg8_jpeg_start_decompress", referenced from:
      gdcm::JPEG8Codec::DecodeByStreams(std::istream&, std::ostream&) in
libitkgdcmMSFF-4.5.a(gdcmJPEG8Codec.cxx.o)
  "_gdcmjpeg8_jpeg_std_error", referenced from:
      gdcm::JPEG8Codec::GetHeaderInfo(std::istream&,
gdcm::TransferSyntax&) in libitkgdcmMSFF-4.5.a(gdcmJPEG8Codec.cxx.o)
      gdcm::JPEG8Codec::DecodeByStreams(std::istream&, std::ostream&) in
libitkgdcmMSFF-4.5.a(gdcmJPEG8Codec.cxx.o)
      gdcm::JPEG8Codec::InternalCode(char const*, unsigned long,
std::ostream&) in libitkgdcmMSFF-4.5.a(gdcmJPEG8Codec.cxx.o)
  "_gdcmjpeg8_jpeg_write_scanlines", referenced from:
      gdcm::JPEG8Codec::InternalCode(char const*, unsigned long,
std::ostream&) in libitkgdcmMSFF-4.5.a(gdcmJPEG8Codec.cxx.o)
  "_gdcmuuid_uuid_generate", referenced from:
      gdcm::UIDGenerator::Generate2() in
libitkgdcmMSFF-4.5.a(gdcmUIDGenerator.cxx.o)
      gdcm::UIDGenerator::GenerateUUID(unsigned char*) in
libitkgdcmMSFF-4.5.a(gdcmUIDGenerator.cxx.o)
ld: symbol(s) not found for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see
invocation)

    mex: link of ' "itkLoadWithMetadataStub.mexmaci64"' failed.

make[2]: *** [mexFiles/itkLoadWithMetadata.mexmaci64] Error 255
make[1]: *** [mexFiles/CMakeFiles/MEX_BLD.dir/all] Error 2
make: *** [all] Error 2

Compilation exited abnormally with code 2 at Wed Nov 20 09:01:17



--
Kent Williams norman-k-williams at uiowa.edu



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