[ITK Community] Fwd: Runtime error while running ResampleDICOM example on Ubuntu13.10

Alok alok.theanomaly at gmail.com
Tue Feb 25 19:51:43 EST 2014


Yes, ITK4.3 compiled GCC & G++ set to version 4.6 - Worked
Earlier I was using GCC-4.8 (Default in Ubuntu 13.10)

Alok


On Tue, Feb 25, 2014 at 2:53 PM, Luis Ibanez <luis.ibanez at kitware.com>wrote:

> Hi Alok,
>
>
> So, just to make sure that I understand.
>
> When building ITK 4.3 with GCC 4.6, the problem went away ?
>
> What GCC version were you using previously ?
>
>   Thanks
>
>      Luis
>
>
> On Tue, Feb 25, 2014 at 1:36 PM, Alok <alok.theanomaly at gmail.com> wrote:
>
>> Hi Luis,
>>
>> I have not tried out what you suggested yet. But I built ITK again with
>> g++-4.6 and gcc-4.6 and its working for me now.
>>
>> I am currently using ITK-4.3 since the project I am working on was
>> written using this version of ITK.
>>
>> Does that make any sense?
>>
>> Thanks
>> Alok
>>
>>
>> On Tue, Feb 25, 2014 at 10:45 AM, Luis Ibanez <luis.ibanez at kitware.com>wrote:
>>
>>> Hi Alok,
>>>
>>> It may help to inspect closely the output on
>>>
>>> const ReaderType::FileNamesContainer & filenames =
>>>                             inputNames->GetInputFileNames();
>>>
>>>
>>>
>>> Something must be going on with the location of the Directory name,
>>> (e.g. maybe spaces in the path ?), or maybe a mixture of extraneous
>>>
>>>
>>>
>>> files in the DICOM directory.
>>>
>>>
>>>
>>>
>>>    HTH
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>        Luis
>>>
>>>
>>>
>>>
>>>  On Tue, Feb 25, 2014 at 8:22 AM, Alok <alok.theanomaly at gmail.com>wrote:
>>>
>>>>
>>>>
>>>> Hi,
>>>>
>>>> I have a problem reading in DiCOM image series when running ITK on
>>>> Ubuntu 13.10 (32-bit)
>>>>
>>>> I have a DICOM image series and I am trying to run the ResampleDICOM
>>>> example here - http://www.itk.org/Wiki/ITK/Examples/DICOM/ResampleDICOM
>>>>
>>>> *At runtime* I get an error which looks like :
>>>> WARNING: In
>>>> .../InsightToolkit-4.3.1/Modules/IO/GDCM/src/itkGDCMSeriesFileNames.cxx,
>>>> line 114
>>>> GDCMSeriesFileNames (0xa12e9e0): No Series can be found, make sure your
>>>> restrictions are not too strong
>>>>
>>>> Exception thrown while reading the series
>>>>
>>>> itk::ExceptionObject (0xa133fe8)
>>>> Location: "unknown"
>>>> File: /usr/local/include/ITK-4.3/itkImageSeriesReader.hxx
>>>> Line: 131
>>>> Description: itk::ERROR: ImageSeriesReader(0xa1312a0): At least one
>>>> filename is required.
>>>>
>>>>
>>>> When I run it on a machine with Ubuntu 12.04 (using the same DICOM
>>>> series) it runs through - The output is as below:
>>>>
>>>> The input series in directory /home/alok/data/HSSPlan/Left/dicom/ has
>>>> 219 files with spacing [0.347656, 0.347656, 1]
>>>> The output series in directory ./output/ has 219 files with spacing
>>>> [0.347656, 1, 1]
>>>>
>>>> Any suggestions/comments much appreciated
>>>>
>>>> Thanks
>>>> Alok
>>>>
>>>>
>>>>
>>>> --
>>>> I live a simple life...  in 0s and 1s !
>>>>
>>>>
>>>>
>>>> --
>>>> I live a simple life...  in 0s and 1s !
>>>>
>>>> _______________________________________________
>>>> Community mailing list
>>>> Community at itk.org
>>>> http://public.kitware.com/cgi-bin/mailman/listinfo/community
>>>>
>>>>
>>>
>>
>>
>> --
>> I live a simple life...  in 0s and 1s !
>>
>
>


-- 
I live a simple life...  in 0s and 1s !
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