[ITK] [ITK-dev] Patches for v4.6.1

[Arnaud Gelas]

Matt,

Following Brad's email, I am testing the following patch right now

http://review.source.kitware.com/#/c/17232/1

If it fixes the issue, I would really like it to be part of 4.6.1

Best
Arnaud


On Thu, Sep 25, 2014 at 4:29 PM, Matt McCormick <matt.mccormick at kitware.com>
wrote:

> Hi,
>
> We currently have the patches below on the "release" branch for the
> v4.6.1 release.  Are there any patches missing?
>
> Thanks,
> Matt
>
>
> Arnaud Gelas (3):
>       BUG: fix gdcm version in GDCMImageIO.
>       COMP: missing cast when calling gdcm::DataElement::SetByteValue
>       BUG: GDCMImageIO was not working properly when m_KeepOriginalUID is
> false
>
> Brad King (1):
>       COMP: Fix vxl_config_macros usage of CMake check macros
>
> Bradley Lowekamp (7):
>       ENH: Adding License file from upstream MetaIO
>       ENH: Adding script to update MetaIO from upstream
>       ENH: Remove ITK MetaIO to prepare for upstream import
>       COMP: Fix variable type for Set/Get macros
>       BUG: Use METER of sCAL scale unit
>       BUG: Use PNG_SCALE_METER for PNG sCAL unit
>       BUG: Fix overflows computing size of read tiff image
>
> Christopher Mullins (1):
>       COMP: Allows latex to compile for ITKSoftwareGuide
>
> David T. Chen (1):
>       DOC: Fixed HistogramThresholdImageFitler
>
> Gert Wollny (1):
>       COMP: Fix SSE2 build errors with WrapITK on GCC 4.9. (ForRelease)
>
> Girish Mallya (1):
>       BUG: Tests added for BinaryImageToLabelMapFilter for single-row
> images.
>
> Hans Johnson (12):
>       COMP: Add tolerance for comparing floating point
>       PERF: Remove non-threadable algorithm components
>       PERF: Remove large foot print of PDF derivatives.
>       PERF: Revert Remove large foot print of PDF derivatives.
>       STYLE: Test against almost equal for floating point values
>       STYLE: Non-exact floating point testing
>       PERF: Distribute initialization per thread buffers
>       ENH: Remove unnecessary mutable qualifier.
>       STYLE: Remove comment with no meaning.
>       ENH: Moved accumlator logic to main MI class
>       ENH: Allow staggering of accumulations per thread.
>       PERF: Zero reset thread buffers during finalize
>
> KWSys Robot (2):
>       KWSys 2014-07-18 (65b36ede)
>       KWSys 2014-08-04 (e787837a)
>
> Matthew McCormick (30):
>       BUG: ArchiveTestingData.py future imports must occur at the
> beginning.
>       DOC: Remove Image2.cxx reference from Book 2.
>       DOC: Fix Software Guide page overruns in IterativeClosestPoint3.cxx.
>       DOC: Remove references to Book 1 sections from Book 2.
>       DOC: Make BinaryThresholdImageFilter not floating.
>       DOC: Fix Software Guide figure caption for FlipImageFilter.
>       DOC: Avoid duplicate figure description in ResampleImageFilter2.cxx.
>       DOC: Remove duplicate figure in
> LaplacianRecursiveGaussianImageFilter2.cxx.
>       DOC: ImageRandomConstIteratorWithIndex table reference.
>       BUG: Bump GCCXML to 2014-08-06.
>       BUG: Fix invalid assignment of second VoronoiBoundaryOrigin.
>       BUG: Call clear instead of empty on PatchBasedDenoising
> EmptyCaches().
>       BUG: Fix Size() in ImageToListSampleAdaptor for VectorImage's.
>       BUG: Fix alpha assignment for RGBA TIFF.
>       BUG: Fix Nifti IO read with large images.
>       BUG: Improve thread-safety and performance of
> PCAShapeSignedDistanceFunction.
>       DOC: itk::statistics -> itk::Statistics.
>       DOC: Remove duplicate text in LaplacianRecursiveGaussian example.
>       DOC: Fix Software Guide page overruns in
> IterativeClosestPoint{1,2}.cxx.
>       BUG: TransformFileReader does not clear its TransformList.
>       BUG: Prevent dangling pointer in HDF5TransformIO.
>       COMP: Fix missing prefix in ITKv3ImageRegistration20Test.
>       BUG: Do not return SmartPointers in TimeVaryingVelocityFieldTransform
>       STYLE: Improve style in BinaryImageToLabelMapFilter.
>       BUG: Fix BinaryImageToLabelMapFilter on 1D image.
>       ENH: Improve precision of the joint PDF sum
>       BUG: Fix BinShrinkImageFilter for different input/output image types.
>       COMP: Fix transform type for ITKv3/IterativeClosestPoint2.
>       COMP: Add missing wrapping for TransformIOBaseTemplate.
>       BUG: gdcm::StringFilter recognizes backslash delimiter.
>
> MetaIO Maintainers (1):
>       MetaIO (reduced)
>
> Michka Popoff (4):
>       BUG: Improve SWIG version check
>       BUG: Add VTK_VERSION for older VTK versions
>       BUG: Update VTK minimum version (for release)
>       BUG: Fix memory leak in MetaImageIO after exception
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