[ITK] [ITK-users] [ANN] ITK 4.9 Release Candidate 3 is ready for testing!

Simon Alexander skalexander at gmail.com
Mon Jan 4 19:56:54 EST 2016


Thanks!

Clean build and test on my machine this time, show's green on the dash for
4th.

On Tue, 22 Dec 2015 at 15:57 Matt McCormick <matt.mccormick at kitware.com>
wrote:

> On behalf of the Insight Toolkit community, we are proud to announce
> that ITK 4.9 release candidate 3 has been tagged and is available for
> testing! Please take this opportunity to test the new features in the
> release candidate.
>
>
> To obtain the source code,
>
>   git clone http://itk.org/ITK.git
>   cd ITK
>   git checkout -q --detach v4.9rc03
>
> For more details, please see the Git documentation [1].
>
>
> A few selected highlights for this release:
>
> * New Remote modules: the Cuberille module for smooth generation of
> meshes from binary segmentation images, and the
> AnisotropicDiffusionLBR module improved edge-preserving smoothing.
> * Build your own ITK module outside the source tree, add continuous
> integration testing on GitHub, and easily add Python wrapping for your
> C++ algorithms.
> * Python wrapping, including Python 3, builds faster with a more
> standard installation
> * Improved performance of itk::Image::GetPixel and operations on
> itk::VariableLengthVector’s
> * Generate a FlatStructuringElement from an image
> * Point-set registration with time-varying B-splines
> * Module dependencies can now be specified as public / private / compile /
> test
>
>
> Please test the release candidate and share your experiences on the
> mailing list, issue tracker, and Gerrit Code Review. The new module
> dependency specification mechanism may unearth missing dependencies
> for projects that use ITK COMPONENTS with the CMake find_package
> command.
>
>
> An Experimental build, which demonstrates how the test suite performs
> on your local build system, can be submitted to the dashboard [2]
> with:
>
>   mkdir ../ITK-build
>   cd ../ITK-build
>   cmake ../ITK
>   ctest -j 4 -M Experimental  -T Configure -T Build -T Test -T Submit
>
> Visual Studio builds must also add “-C Release” to the ctest command.
>
> Notify the mailing list if there are any unexpected failures.  Testing
> your own applications against the RC is also appreciated.
>
>
> Congratulations and well done to the 43 contributors to this release.
> We would especially like to recognize the new contributors: Mikhail
> Isakov, Betsy McPhail, Luc Hermitte, Shawn Waldon, Tobias Wood,
> Ricardo Ortiz, Sreekanth Arikatla, Hyun Jae Kang, Lucas Gandel, Adam
> Snyder, Junjie Bai, Seun Odutola, Abhishek Tiwari, Eugene Prilepin,
> Zach Williamson, Alexander Leinoff, Alexis Girault, Laurentiu Nicola,
> Floris Berendsen, Max Smolens, and Pablo Hernandez-Cerdan.
>
> Many community members stepped up to contribute fixes for this release
> candidate. To allow testing and accommodate the upcoming holiday, the
> final release is re-scheduled for mid-January.
>
>
> Known issues in this release candidate, to be fixed before the final
> release:
> * TransformReadWriteTest fails on Mac OSX with shared libraries.
> * Mac OSX 10.6 has build errors.
>
>
> [1] http://www.itk.org/Wiki/ITK/Git
>
> [2] http://open.cdash.org/index.php?project=Insight
>
>
>
> New Features
> ---------------------
>
> * Wrapping improvements
>    * Python 3 supported
>    * Wrapping builds much faster due to CastXML binaries
>    * LandmarkBasedTransformInitializer now wrapped
>    * NumPy bridge with VisualStudio
>    * Wrapping for the MinimalPathExtraction module
>    * Wrapping is now installed into Python’s site-packages directory
> in the “itk” package
>    * Wrapping package size is decreased
>    * Better package portability on Mac OSX
>
> * New Remote Modules
>    * Cuberille
>    * Insight Journal Article: http://hdl.handle.net/10380/3186
>    * AnisotropicDiffusionLBR
>    * Insight Journal Article: http://hdl.handle.net/10380/3505
>    * Web browser reproducibility:
> http://www.kitware.com/blog/home/post/942
>
> * Core Improvements
>    * External Modules can now be developed outside of the ITK source
> tree and on GitHub
>    * Details: http://www.kitware.com/blog/home/post/997
>    * New utilities in itk::Math:
>    * AlmostEquals
>    * NotAlmostEquals
>    * ExactlyEquals
>    * NotExactlyEquals
>    * New itk::NumericTraits
>    * IsInteger
>    * IsSigned
>    * Improved C++11 support
>    * New ITK_DELETE_FUNCTION macro for “=delete”
>    * New ITK_NOEXCEPT macro for the “noexcept” keyword
>    * Improved capabilities of itk::ResourceProbe and
> itk::ResourceProbesCollectorBase
>    * Improve numerical stability in VNL eigen system estimation
>    * itksys_ios:: and itksys_stl:: have been remove (use std::)
>
> * Filtering Improvements
>    * Generate a FlatStructuringElement from an image
>    * WarpImageFilter support VectorImage’s
>    * ConvertLabelMap supports different LabelMap types
>    * ImageToPathFilter moved from the ITKReview to the ITKPath module
>    * itk::MovingHistogramImageFilter moved to the ITKImageFilterBase module
>
> * Registration Improvements
>    * Point-set registration with time-varying B-splines
>
> * Build Improvements
>    * Module dependencies can now be specified as public / private /
> compile / test
>    * BUILD_EXAMPLES CMake option is now OFF by default
>    * Option to export all library symbols on Windows:
>    * Details: http://www.kitware.com/blog/home/post/939
>    * Expat third party library is now name mangled
>    * Many more modules can be built as shared libraries
>    * KWStyle is automatically built and configured when tests are built
>
> * Performance Improvements
>    * New MetaProgrammingLibrary namespace (itk::mpl) holds members for
> metaprogramming
>    * itk::mpl::{TrueType,FalseType}
>    * itk::mpl::{If,Not,And,Or,Xor}
>    * itk::mpl::EnableIf
>    * itk::mpl::IsBaseOf
>    * itk::mpl::IsConvertible
>    * itk::mpl::IsNumber
>    * itk::mpl::IsSame
>    * itk::mpl::PromoteType
>    * Image::GetPixel performance improvements
>    * Many itk::VariableLengthVector performance improvements
>    * AdaptiveHistogramEqualization uses a moving histogram
>    * WarpImageFilter performance improvements
>
> * Documentation Improvements
>    * Updates to the Software Guide, Doxygen, Wiki and Sphinx Examples
>    * ITK Software Guide improvements
>    * How to use Python wrapping
>    * How to create an ITK module
>    * Improvements to segmentation examples
>    * Expanded Canny edge detection example
>    * Expanded tree container example
>
> * Third Party Library Updates
>    * FFTW updated to latest upstream
>    * Build with recent OpenCV 2 and 3
>    * Build with the latest VTK
>    * PNG update to the latest upstream
>    * GDCM updated to the latest upstream
>    * KWSys updated to the latest upstream
>    * MINC updated to the latest upstream
>    * SWIG updated to the latest upstream
>    * Third party PNG and MINC are now Git subtrees
>
> * Style improvements -- ITK gets more stylish with every release!
>    * Private copy constructors and operator= use ITK_DELETE_FUNCTION
>
> * Improved code coverage -- we are at 84.9%!
>
> * *Lots* of important bug fixes
>
> * And much more! See details in the log below.
>
>
> Changes from v4.9rc02..v4.9rc03
> ------------------------------------------------
>
> Alexis Girault (1):
>       BUG: Implement SetAutoMinimumMaximum in
> itkScalarImageToHistogramGenerator
>
> Bill Lorensen (1):
>       BUG: nifti_read_subregion_image was leaking file pointers
>
> Brad King (7):
>       ENH: Teach ITK module macros to support independent header-only
> modules
>       ENH: Add script to import KWIML library source code
>       ENH: Add `ITKKWIML` module to provide external KWIML library
>       ENH: Port TIFF integer types from KWSys to KWIML
>       ENH: Port LSM integer types from KWSys to KWIML
>       ENH: Port itkIntTypes.h from KWSys to KWIML
>       ENH: Drop KWSys FundamentalType component
>
> Bradley Lowekamp (1):
>       ENH: Add option to choose scheme for git download
>
> Davis Vigneault (1):
>       STYLE: Use cstdlib return macros in ITK examples
>
> Dženan Zukić (3):
>       BUG: do not pass 0,0,0 to Versor.Set()
>       STYLE: Removing the unused NeighborhoodRadius property
>       ENH: Write out transform in DeformableRegistration15
>
> Gert Wollny (1):
>       BUG: Remove double-conversion from public interface, use system.
>
> Hyun Jae Kang (8):
>       ENH: Use a data struct to export the system information of a probe.
>       ENH: Create a test for the SpawnThread function ( ITK-3317)
>       STYLE: Remove an unnecessary file (-w) from source code
>       BUG: Fixed the failed case of itkStdStreamStateSaveTest on OS X 10.8
>       BUG: Fixed the failed test case of itkThreadPoolTest on OS X 10.8
>       BUG: Fixed a failed test of ITKDistanceMapTestDriver
>       BUG: Fixed the failed test VideoSourceTest
>       PERF: Improve the performance of a test of
> ITKRegistrationMethodsv4TestDriver
>       COMP: Fixed the compiler error of
> itkDisplacementFieldToBSplineImageFilterTest
>
> Jean-Christophe Fillion-Robin (25):
>       BUG: Build ITKIOTransformHDF5 as shared library. See #3393
>       BUG: Build ITKIOTransformMINC as shared library. See #3393
>       BUG: Build ITKIOTransformMatlab as shared library. See #3393
>       BUG: Build ITKIOTransformInsightLegacy as shared library. See #3393
>       STYLE: TransformIOFactory: Remove obsolete declaration. See #3393
>       COMP: TransformIOFactory: Add missing ctor/dtor from hxx file. See
> #3393
>       COMP: TransformFileWriter: Remove method "OpenStream()" without
> definition
>       COMP: TransformFileReaderTemplate: Remove undefined method
> "CreateTransform()"
>       ENH: Update ITKIOPhilipsREC to allow static initialization. See #3393
>       ENH: Update ITKIOTransformMINC to allow static initialization. See
> #3393
>       COMP: MINC: Fix VS2008 "unknown round" build error. See #3393
>       COMP: MINC: Fix VS2008 "unknown arpa/inet.h" build error. See #3393
>       COMP: Configure ENABLE_SHARED into <ModuleName>.cmake file. See #3393
>       COMP: Fix configuration of IOFactory header. See #3393
>       STYLE: UseITK: Removed redundant code setting ImageIO factory
> name. See #3393
>       STYLE: UseITK: Re-factor introducing
> _configure_IOFactoryRegisterManager
>       STYLE: UseITK: Set TransformIO factory and module name using
> convention.
>       BUG: Ensure Image IO factories are registered once. See #3393
>       BUG: Ensure Transform IO factories are registered once.
>       COMP: ITKIOXML: Fix VS11 "already defined std::string" link
> error. See #3393
>       BUG: TransformIO: Implement explicit template instantiation
> using "extern".
>       COMP: TransformIO: Fix VS build errors removing extra EXPORT
>       COMP: TransformIO: Handle compiler not supporting "pragma
> diagnostic".
>       COMP: TransformIO: TransformFile(Reader|Writer) still need to be
> exported.
>       COMP: TransformIO: Fix explicit instantiation approach
>
> Johan Andruejol (1):
>       ENH: Add ITK_RUNTIME_LIBRARY_DIRS for external projects
>
> KWIML Upstream (1):
>       KWIML 2015-12-09 (43f9f8d0)
>
> Lucas Gandel (1):
>       BUG: PhysicsBasedNonRigidRegistrationMethod test failure on Debian
> 32bit
>
> Matthew McCormick (16):
>       COMP: Fix PointDimension reference in AzimuthElevationToCartesian
> test.
>       STYLE: Improve scoping in AzimuthElevationToCartesian test.
>       STYLE: Explicitly mark the ProcessObject methods virtual in
> SignedMaurer.
>       BUG: Do not try to install targets that do not exist when
> building externally.
>       BUG: ITKIOMeta needs a public dependency on ITKMetaIO.
>       COMP: Update LesionSizingToolkit for external build and style
> test failures.
>       BUG: Add CMake OpenCV export code to ITKVideoBridgeOpenCV.
>       COMP: Improve compatibility with OpenCV 3.
>       DOC: Fix class references in StatisticsLabelMapFilter.
>       STYLE: Improved readability of
> itkStatisticsUniqueLabelMapFilterTest1.
>       DOC: Correct ReverseOrdering description in
> ShapeUniqueLabelMapFilter.
>       STYLE: Add own copy of GenerateExportHeader
>       COMP: Create _TEMPLATE_EXPORT macros.
>       COMP: TransformIOBaseTemplate must be explicitly instantiated.
>       BUG: Do not use dynamic_cast for DisplacementFieldType in HDF5 test.
>       COMP: Do not use string(MAKE_C_IDENTIFIER with CMake < 2.8.12
>
> Max Smolens (1):
>       BUG: VoronoiSegmentationRGBImageFilter: add pixel dimension check
>
> Mikhail Isakov (1):
>       DOC: correction in DiffusionTensor3D Reconstruction
>
> Ricardo Ortiz (1):
>       BUG: Set itkBinaryImageTo*LabelMapFilter foreground/background values
>
> Seun Odutola (1):
>       BUG: absolute value of tolerance taken to cater for negative spacing
>
> Shawn Waldon (1):
>       COMP: OSX set deployment target when building fftw
>
> Simon Alexander (4):
>       STYLE: Change to make git bash on windows happy with the function
> name
>       COMP: fixes for visual studio 2015update1 x86 in release mode
>       COMP: fixes for visual studio 2015update1 x86 in release mode
>       COMP: fixes for visual studio 2015update1 x86 in release mode
>
> Sreekanth Arikatla (2):
>       BUG: Resolved const correctness in itkMatrix.h
>       ENH: Fixes the symmetry of AzimuthElevationToCartesianTransform
> and adds tests
>
>
> Changes from v4.9rc01..v4.9rc02
> ------------------------------------------------
>
> Bill Lorensen (1):
>       BUG: Valgrind detected an invalid read
>
> Davis Vigneault (1):
>       STYLE: Address some warnings when running cppcheck
>
> Hyun Jae Kang (2):
>       COMP: Fixed a warning message of data-conversion on VS14
>       COMP: Update KWStyle to remove format-string warning message
>
> Matthew McCormick (3):
>       DOC: Remove invalid wrapping example.
>       BUG: Wrap AdaptiveEqualizationHistogram.
>       COMP: Ignore Doxygen endcond warning in itkIsConvertible.h.
>
> Seun Odutola (1):
>       COMP: Corrected minc2.h path installation from libsrc2/minc2.h to
> minc2.h
>
> Ziv Yaniv (2):
>       BUG: Affine transformation was estimated without sufficient
> number of points.
>       BUG: fixed BSpline initializer crash when reference image not set.
>
>
> Changes from v4.8.0..v4.9rc01
> --------------------------------------------
>
> Abhishek Tiwari (1):
>      BUG: "tmpImageIndex" not initialized to 0.
>
> Adam Snyder (1):
>      PERF: Reworked MMI Threading using a per-thread buffer
>
> Alexander Leinoff (6):
>      ENH: Adds IsInteger and IsSigned to NumericTraits.
>      COMP: Doxygen itkMath.h 'OneValue()' could not be resolved.
>      ENH: Adds ExactlyEquals and NotExactlyEquals functions to itkMath.h
>      COMP: Removes floating-point equality checks
>      ENH: COMP: Adds support for complex values to Math::AlmostEquals
>      ENH: Updates fftw dependency
>
> Arnaud Gelas (5):
>      COMP: fix warning (unused local typedef)
>      COMP: simplify ITKVideoBridgeOpenCV dependency
>      DOC: add doxgen documentation for BinaryImageToLevelSetImageAdaptor
>      ENH: add tests to exercise itk::ThreadedIteratorRangePartitioner
>      COMP: fix compilation error with OpenCV2 and OpenCV3
>
> Betsy McPhail (1):
>      BUG: Improve buffer alignment in OctreeNode .
>
> Bill Hoffman (2):
>      ENH: Use new CMake Windows export symbol dll feature.
>      COMP: Put vnl_export.h in the list of sources so it gets installed.
>
> Bill Lorensen (4):
>      COMP: VTkGlue linker errors
>      BUG: Inappropriate use of AlmostEquals
>      ENH: Bump tag for wiki examples
>      ENH: Better layout strategy
>
> Brad King (3):
>      ENH: Remove use of include <itksys/ios/*> and itksys_ios::*
>      ENH: Remove use of include <itksys/stl/*> and itksys_stl::*
>      ENH: Update CMake Policy settings in Testing/TestExternal project
>
> Bradley Lowekamp (31):
>      BUG: Avoid null deference in PrintSelf with default construction
>      ENH: Enable base classes for templates of landmark initializer
>      STYLE: Use "Swap" for ITK member name
>      BUG: Demonstrate Eigen analysis failure
>      BUG: Fix computation of Eigen analysis
>      ENH: Update DiscreteHessianGaussian Test baseline
>      ENH: Correctly demonstrate float point Eigen failure
>      ENH: compile vnl_math_hypot, and use at least double
>      ENH: Adding initial update script from used libpng version.
>      ENH: removing non-subtree files for itkpng
>      ENH: Ported ITK changes for building to subtree merged code
>      ENH: Update libpng update script for v1.6.9
>      BUG: Use ParameterValueType for computation of landmark affine
>      ENH: Wrap LandmarkBasedTransformInitializer
>      BUG: Avoid potential exception in itk::Object::UnRegister
>      ENH: Update itkpng zlib, configuration, and rename
>      ENH: Update itkpng name mangling
>      BUG: Use const pointer in Set method for constant ReferenceImage ivar
>      BUG: Increase tolerance for PhysicsBasedNonRigidRegistrationMethod
>      BUG: Demonstrate side effect on registration due to BSplineScatter
> change
>      ENH: Move MovingHistogramImageFilter base classes to ImageFilterBase
>      BUG: Avoid potential exception in itk::Object::UnRegister
>      BUG: Avoid null deference in PrintSelf with default construction
>      BUG: Use const pointer in Set method for constant ReferenceImage ivar
>      ENH: Optimize AdaptiveHistogramEqualization with MovingHistogram base
>      COMP: address sign unsigned comparison warning
>      COMP: Address signed unsigned comparison warning
>      COMP: Address unused member variable and methods in anonymous ns
>      BUG: Fix segfault when with empty IsolatedWatershed Threshold range
>      BUG: Adjust intensity tolerance for PhysicsBasedNonRigid test
>      BUG: Reduce number of targets with MSVC
>
> Davis Vigneault (7):
>      DOC: Minor improvements to segmentation examples.
>      DOC: Expanded Canny Edge Detection Example
>      DOC: Expanded TreeContainer Example
>      COMP: Warnings in itkVTKImageExport when compiling with c++11
>      COMP: Warnings in FFTW Classes when compiling with c++11
>      COMP: Update Git Tag for Subdivision Module
>      COMP: Warnings in FFTW Classes when compiling with c++11
>
> Dženan Zukić (1):
>      STYLE: better formatting of the "usage" message
>
> Eugene Prilepin (1):
>      BUG: Fix a template name formation in python wrappings
>
> Floris Berendsen (1):
>      STYLE: Improve naming conventions in comments.
>
> Hans Johnson (29):
>      STYLE: Instrument for FixedParameters typedef
>      BUG: Demonstrate DisplacementTransformFailure
>      BUG: FixedParameters should be double precision
>      STYLE: Minor code style issues for MGHIO
>      COMP: Update to version for WikiExamples
>      ENH: Update Sphinx for ITK 4.8.0
>      ENH: Update MGHIO to be shared lib
>      ENH: Provide consistent floating point comparisons
>      BUG: Fix MGHIO to fix write failures
>      PERF: Remove floating point as sentinal value
>      COMP: Const correctness needs to be maintained
>      BUG: Preserve backwards compatibility
>      DOC: Provide consistent naming in comments
>      ENH: Conversion between transform type tolerance
>      STYLE: Prefer initialization to assignment
>      ENH: Missing ITK_OVERRIDE
>      COMP: Need to propagate ITKGDCM
>      COMP: Need to propagate ITKGDCM
>      COMP: Add missing ITK_OVERRIDE
>      STYLE: Minor code style issues for MGHIO
>      COMP: Update to version for WikiExamples
>      ENH: Update Sphinx for ITK 4.8.0
>      ENH: Update MGHIO to be shared lib
>      BUG: Fix MGHIO to fix write failures
>      ENH: C++11 allows for rigorous =delete
>      COMP: Remove unnecessary failing assert test
>      ENH: Ignore internal files for the Clion editor
>      COMP: Fix VNL compilation for wider C++11 support
>      BUG: In configuration test need to mirror code
>
> Hyun Jae Kang (27):
>      BUG: Remove std::cout calls from class
>      BUG: Avoid an unexpected output of static_cast
>      BUG: Update python example codes for ImageRegistration
>      BUG: Retrieve the missed wrap file
>      BUG: itkVTKImageIO class does not handle blank lines in VTK file
> header.
>      BUG: Fix HDF5 CMake configuration with VS2015
>      BUG: Fix a compilation issue on ITK4 with FFTW and shared libraries
>      BUG: Fixed older XCode linking error
>      ENH: Use CastXML binaries when building with x86_64 Mac OS X
>      BUG: Remove std::cout calls from class
>      BUG: itkVTKImageIO class does not handle blank lines in VTK file
> header.
>      BUG: Fixed older XCode linking error
>      ENH: Add automatic KWStyle build and configuration setup
>      COMP: KWStyle shadow, format-nonliteral and autological-compare
> warning.
>      COMP: Fixed the warning messages from itkGPU Module
>      COMP: Fixed a warning message of unused-private-field
>      COMP: Apply latest version of KWStyle
>      COMP: Update KWStyle to fix its additional warning messages
>      COMP: Update KWStyle to fix its additional warning messages
>      COMP: Fix data-conversion warning messages on Windows
>      ENH: Update itkResourceProbe to calculate statistical data
>      COMP: Fix data-conversion warning messages on VS14
>      COMP: Fixed 'std::sqrt' : ambiguous call to overloaded function
>      ENH: Update the Report() function of itkResourceProbesCollectorBase
>      COMP: Fix data-conversion warning message on itkResourceProbe
>      COMP: Fix additional warning messages of KWStyle
>      COMP: Fix data-conversion warning messages
>
> Jon Haitz Legarreta (6):
>      ENH: Add test for itkStatisticsUniqueLabelMapFilter
>      BUG: Fix compilation issues for StatisticsUniqueLabelMapFilterTest
>      BUG: Fix comparison issues for itkStatisticsUniqueLabelMapFilter
>      BUG: Test for StatisticsUniqueLabelMapFilter stability
>      ENH: Add test for itkParametricStpaceToImageSpaceFilter
>      ENH: Improve code coverage for
> itkParametricSpaceToImageSpaceMeshFilter
>
> Julien Michel (1):
>      ENH: Support of VectorImage as template parameters for WarpImageFilter
>
> Junjie Bai (2):
>      BUG: ConvertLabelMap with different LabelMapTypes
>      BUG: LabelObject CopyAttribute support different LabelObject type
>
> KWSys Robot (4):
>      KWSys 2015-07-10 (c9336bcf)
>      KWSys 2015-07-30 (f63febb7)
>      KWSys 2015-08-24 (cdaf522c)
>      KWSys 2015-08-28 (dc3fdd7f)
>
> LIBPNG Upstream (2):
>      PNG 2009-04-06 (e68f5a36)
>      PNG 2014-02-05 (3e753eb8)
>
> Laurentiu Nicola (2):
>      PERF: Avoid temporary smartptr in ProcessObject::GetInput
>      PERF: Optimize WarpImageFilter by avoiding refcount bouncing
>
> Luc Hermitte (8):
>      PERF: itk::Image::GetPixel() performance improvment.
>      PERF: Performance enhancements on VariableLengthVectors 1/...
>      ENH: Dependencies on itkVariableLengthVector.h reduced
>      BUG: Error in VariableLengthVector Unit Tests
>      PERF: Performance enhancements on VLV 2/...
>      PERF: Performances enhancements on VLV 3/...
>      COMP: Fix signed/unsigned warnings
>      BUG: std::copy/fill on empty VLV
>
> Lucas Gandel (4):
>      ENH: Move ImageToPathFilter from ITKReview to ITKPath module.
>      BUG: Fixing ImageToPathFilter wrapping call from Review Module
>      STYLE: Fix KWStyle dashboard errors
>      BUG: Fix external module BUILD_SHARED_LIBS status
>
> Mathieu Malaterre (1):
>      BUG: Name mangle the included expat third party library.
>
> Matthew McCormick (94):
>      ENH: Change itkSystemInformationTest to itkCMakeConfigurationTest.
>      ENH: Add AnisotropicDiffusionLBR Remote Module.
>      ENH: Bump ITK version to 4.9.0.
>      BUG: Remove std::cout calls from classes.
>      COMP: Remove unused argument in ConditionVariableNoThreads.
>      BUG: Implement UpdateLargestPossibleRegion for ImageToVTKImageFilter.
>      COMP: Add link interface specification for wrapping
> target_link_libraries.
>      STYLE: Fix indentation in itkMINCTransformIOFactory.cxx.
>      COMP: Fix MINCTransformIO factory registration.
>      COMP: Add -D_LARGEFILE64_SOURCE for HDF5 with Emscripten-1.
>      COMP: Remove unknown doxygen command in AnisotropicDiffusionLBR.
>      BUG: Initialize mutex for 32 bit AtomicInt.
>      ENH: Use CastXML binaries when building with x86_64 Linux.
>      STYLE: Rename gccxml -> castxml in {idx,igenerator}.py.
>      COMP: Disable the gold linker for static builds on Ubuntu 14.04.
>      ENH: Use Windows binaries for CastXML.
>      ENH: Add better scoping in igenerator.py.
>      BUG: Fix CMAKE_BUILD_TYPE initialization with Ninja + MSVC.
>      BUG: LevelSetsv4 used signed char instead of char.
>      ENH: Add better scoping to idx.py.
>      COMP: Define newSize and oldSize in VariableLengthVector.
>      STYLE: Use prefix increment operator in ImageBase.
>      DOC: Correct spelling of Continuous.
>      ENH: Add more progress information to IterativeClosestPoint2.
>      BUG: Build BridgeNumPy with Visual Studio.
>      ENH: Add ITKModuleExternal.cmake
>      COMP: Wrap Image< bool, D > for FlatStructuringElement.
>      BUG: Use CastXML binary built in Release.
>      BUG: ContinuousIndex should not be templated over TCoordRep.
>      COMP: Set CMP0054 to new.
>      COMP: Address line length too long for Software Guide.
>      COMP: Fix CannyEdgeDetectionImageFilter.cxx types.
>      BUG: Support Python 3 wrapping module initialization.
>      BUG: Update itkTemplate.py for Python 3.
>      BUG: Update itkExtras.py for Python 3.
>      BUG: Prevent Python callback addition recursion.
>      BUG: Fix test scripts for Python 3.
>      BUG: Replace __GCCXML__ with CABLE_CONFIGURATION.
>      ENH: Allow projects to build against an external module.
>      ENH: Replace CABLE_CONFIGURATION with ITK_WRAPPING_PARSER.
>      ENH: Rename _cable_ to _wrappers_.
>      BUG: Replace __GCCXML__ with CABLE_CONFIGURATION.
>      BUG: Define ITK_WRAPPING_PARSER when wrapping.
>      COMP: Do not use C++11 alignas in itkAlignedTypedef.
>      ENH: Bump CMakeLists.txt version to 4.8.1.
>      BUG: Pass the CMAKE_CXX_FLAGS to castxml.
>      ENH: Bump CastXML version to 2015-30-29.
>      ENH: Bump LLVM / Clang to 3.7.0.
>      COMP: Avoid itklibminc linking with ITK_USE_SYSTEM_HDF5.
>      COMP: Add missing ITKIOImageBase dependency for ITKTransformMINC.
>      COMP: Use itkSimpleNewMacro in ThreadedIteratorRangePartitionerTest.
>      ENH: Add wrapping support for building modules externally.
>      BUG: Fix KWStyle test paths when building a module externally.
>      ENH: Add Cuberille Remote module.
>      COMP: Remove carriage returns from Cuberille remote.
>      COMP: Remove unused argument in ConditionVariableNoThreads.
>      DOC: Correct spelling of Continuous.
>      ENH: Bump the MinimalPathExtraction Remote to 2015-10-20.
>      COMP: Fix KernelTransform SetFixedParameters argument type.
>      STYLE: Use prefix increment operator in ImageBase.
>      COMP: Use ITK's pygccxml by correctly setting up the sys.path
>      Revert "COMP: Put vnl_export.h in the list of sources so it gets
> installed."
>      BUG: Revert "BUG: ConvertLabelMap with different LabelMapTypes"
>      ENH: Marking wrapping CMake configuration variables as advanced.
>      STYLE: Rename CASTXML to CASTXML_EXECUTABLE.
>      COMP: Non-virtual copy attribute members in LabelMap cannot have
> override.
>      COMP: Add wrapping for AdaptiveHistogramEqualizationImageFilter.
>      COMP: Add itkMacro.h to itkPromoteType.h for ITK_EXCEPT.
>      ENH: Remove CMake version check in ITKModuleHeaderTest.cmake
>      BUG: Improve KWStyle ExternalProject utilization.
>      ENH: Remove old KWStyle build script.
>      COMP: Address VariableLengthVector Doxygen rhs @param not found.
>      ENH: Rename WRAPPING_LIBRARY_GROUPS to WRAPPING_SUBMODULE_ORDER.
>      ENH: Install Python bindings into site-packages.
>      ENH: Improve readability of Python site-packages path detection.
>      COMP: DiscreteGaussianDerivativeImageFilter unsigned expression
> warning.
>      BUG: ITKCommon publically depends on ITKDoubleConversion.
>      COMP: Improve scoping in CovariantVectorGeometryTest.
>      ENH: Improves names and export of module dependencies.
>      STYLE: Improve namespace bracket style in itkIsConvertible.
>      COMP: Set CMP0054 to new.
>      BUG: Remove unused wrapping files.
>      BUG: Do install install wrapping development files.
>      ENH: Add WRAP_ITK_INSTALL_COMPONENT_IDENTIFIER.
>      BUG: Remove duplicate inclusion of wrapping submodules.
>      COMP: Do not use C++ style comments for Doxygen cond.
>      BUG: Fix detection of the gold linker.
>      BUG: Update Python package installation locations.
>      ENH: Bump CMakeLists.txt version to 4.8.2.
>      ENH: Change BUILD_EXAMPLES default to OFF.
>      BUG: Use 'from itk import ITKCommon' in module2module test.
>      COMP: Link to VTK Python when built with Kits support.
>      BUG: Install itk_minc2.h header.
>      COMP: ITKIOMINC has a public dependency on ITKIOImageBase.
>
> Michka Popoff (9):
>      ENH: Update to swig 3.0.7
>      ENH: Do not link against specific Python library on OS X
>      COMP: Fix wrapping warnings when building with ITK_WRAP_IMAGE_DIMS=2
>      COMP: Add missing wrapping for TransformBase
>      COMP: Use ITK's pygccxml by correctly setting up the sys.path
>      COMP: Disable incompatible modules when using Python 3 wrapping
>      COMP: Move MovingHistogramImageFilterBase wrapping to
> ImageFilterBase module
>      COMP: Disable incompatible modules when using Python 3 wrapping
>      ENH: Allow operations on Indexes and Offsets in Python
>
> Mikhail Isakov (1):
>      BUG: DiffusionTensor3DReconstruction segfault if no baseline image
>
> Nick Tustison (5):
>      BUG:  Set a default b-spline epsilon.
>      ENH: Adding testing for closed loop.
>      BUG:  Updating B-spline classes with the same epsilon strategy.
>      PERF:  Switch vnl_vectors for fixed arrays.
>      ENH:  Point-set registration with time-varying B-spline.
>
> Olivier Commowick (3):
>      BUG: Correct discrepancy in tridiagonal reduction wrt VNL eigen system
>      BUG: Correct under/overflows in vnl_math_hypot (taken from pythag
> from V3P)
>      BUG: Switch eigenvalues computation to double
>
> Pablo Hernandez-Cerdan (2):
>      ENH: Help class for itkFlatStructuringElement with constructor from
> images.
>      COMP: Fix test errors and warnings in FlatStructuringElement.
>
> Seun Odutola (1):
>      COMP: Fixed name clash with Apple header (check Macro), renamed
> check to Check
>
> Shawn Waldon (1):
>      COMP: Set target OS X version in environment for tools using compiler
>
> Simon Alexander (1):
>      BUG: incorrect closest point computation
>
> Tobias Wood (2):
>      BUG: LBFGSB was printing messages even with debug switched off.
>      BUG: Removed an unguarded print statement.
>
> Vladimir S. FONOV (9):
>      BUG: Missing ITKIOMINC_EXPORT on __Private()
>      COMP: Changing the order of HDF5 library components
>      COMP: Splitting up IOMINC module into two parts: MINC and Transform
>      STYLE: updated comments to properly reference LIBMINC
>      ENH: Add script to merge upstream MINC as a subtree
>      MINC 2015-07-23 (c033d431)
>      COMP: Update MINC CMake code
>      MINC 2015-08-18 (6d7e3ba8)
>      MINC 2015-09-13 (95cd5374)
>
> Xiaoxiao Liu (1):
>      DOC: update email address for xiaoxiao.
>
> Zach Williamson (10):
>      BUG: Use correct libraries for ImageFusion tests
>      ENH: Consolidate Library Dependencies
>      COMP: Add a missing link to Review module
>      COMP: Use correct linking macro in DCMTK
>      BUG: Use correct libraries for TestKernel tests
>      COMP: Fix inconsistant naming of GPUPDEDeformableRegistration
>      ENH: Use new linking system macros
>      PERF: Avoid searching private dependencies for include directories
>      COMP: Recover missing dependencies
>      ENH: use new linking macros in Filtering module
>
>
>
> -----------------------------------------------------
> Errors or omissions? Please fix them here:
>
>
> https://docs.google.com/document/d/1j3IAZFfi0ToO8N6hTr0fVTTMmHIMkXAxx0AsAajsYuM/edit
> _____________________________________
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>
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