[Insight-developers] RE: Problems in MultiResMIRegistration

Bill Hoffman bill.hoffman@kitware.com
Wed, 27 Mar 2002 14:10:20 -0500 

The problem was in the ADD_EXECUTABLE command, you had:

ADD_EXECUTABLE(VanderbiltValidation/VanderbiltValidation   VanderbiltValidation_SRCS )

Which should create an executable in the VanderbiltValidation subdirectory.
Due to a bug in cmake, if you were building out of the source tree this did not work.

So, if you want the executable to be in the sub directory, you should
create a CMakeLists.txt file in the sub directory.  You can also have the
executable in the current directory and not create a new CMakeLists.txt file
like this:

ADD_EXECUTABLE(VanderbiltValidation   VanderbiltValidation_SRCS )

BTW, I have fixed the cmake bug, but that will not help here as ITK needs to build
with cmake 1.2.


-Bill

At 09:37 AM 3/27/2002 -0800, Lydia Ng wrote:
>I introduced the VanderbiltValidation directory about 12 days ago.
>The idea was that my validation study and example would share a lot of
>code in common so I wanted to factorized things out into base classes
>etc.
> 
>The directory structure I had in mind was:
> 
>MultiResMIRegistration
>  - Common (contains all the base classes and example)
>  - VanderbiltValidation( contains all the classes only relevant to the
>validation)
> 
>But I wanted both exes to be build just in MultiResMIRegistration
>instead of in the subdirectories. Is that a bad idea?
>It was just easier to manipulate the scripts/parameter files needed to
>drive both the example and rather large validation study. 
> 
>I did test this structure out with CMake for VC++ and Cygwin/gcc 
>and make sure things work properly before checking it in.
> 
>I am sure that the VanderbiltValdiation has been building on other unix
>platforms since checking in because I had made changes to fix warnings
>and errors etc.
> 
>Do people want me to change the directory structure and/or where
>the exes are the to built? If so, how would they like it changed?
> 
>- Lydia
>
>> -----Original Message-----
>> From: Bill Hoffman [mailto:bill.hoffman@kitware.com]
>> Sent: Wednesday, March 27, 2002 6:05 AM
>> To: Lorensen, William E (CRD); Lorensen, William E (CRD); 
>> Lydia Ng; Luis
>> Ibanez
>> Cc: Insight Developers
>> Subject: RE: [Insight-developers] RE: Problems in 
>> MultiResMIRegistration
>> 
>> 
>> I would say that there should be a CMakeLists.txt file in the 
>> VanderbiltRegistration directory, or the executable should 
>> not be put in
>> that directory.
>> 
>> -bill
>> 
>> 
>> At 08:32 AM 3/27/2002 -0500, Lorensen, William E (CRD) wrote:
>> 
>> >Not quite resolved. On Windows, cmakesetup complains that it 
>> cannot write in the
>> >VanderbiltRegistration directory (which does not exists on the PC).
>> >
>> >I've put an IF/ELSE to handle UNIX and Windows differently.
>> >
>> >There may be a better solution.
>> >
>> >Bill
>> >
>> >-----Original Message-----
>> >From: Lorensen, William E (CRD) 
>> >Sent: Wednesday, March 27, 2002 7:21 AM
>> >To: 'Lydia Ng'; William A. Hoffman; Luis Ibanez
>> >Cc: Insight Developers
>> >Subject: RE: [Insight-developers] RE: Problems in 
>> MultiResMIRegistration
>> >
>> >
>> >It's resollved and check in.
>> > 
>> >Bill, I added the 
>> >INCLUDE_REGULAR_EXPRESSION(".*")
>> >
>> >I also changes the ADD_EXECUTABLE line to:
>> > ADD_EXECUTABLE(VanderbiltValidation/VanderbiltValidation   
>> VanderbiltValidation_SRCS )
>> >
>> >Bill
>> > 
>> >
>> >-----Original Message-----
>> >From: Lydia Ng [mailto:lng@insightful.com]
>> >Sent: Wednesday, March 27, 2002 1:24 AM
>> >To: William A. Hoffman; Luis Ibanez
>> >Cc: Lorensen, William E (CRD)
>> >Subject: RE: [Insight-developers] RE: Problems in 
>> MultiResMIRegistration
>> >
>> >
>> >Is this issue resolve now? Is there something I need to go and fix?
>> >- Lydia
>> >
>> >-----Original Message----- 
>> >From: William A. Hoffman 
>> >Sent: Tue 3/26/2002 6:11 PM 
>> >To: Luis Ibanez 
>> >Cc: Lorensen, William E (CRD); Lydia Ng 
>> >Subject: Re: [Insight-developers] RE: Problems in 
>> MultiResMIRegistration
>> >
>> >
>> >
>> >my bad, I did not have an up-to-date cvs.
>> >
>> >It would seem there is no longer a common prefix for these files,
>> >so if you change the regular expression to this:
>> >INCLUDE_REGULAR_EXPRESSION(".*")
>> >
>> >You get a full set of depends.
>> >
>> >-Bill
>> >
>> >
>> >At 08:23 PM 3/26/2002 -0500, Luis Ibanez wrote:
>> >
>> >>Yeap, It is strange !
>> >>
>> >>On linux I got the attached cmake.depend
>> >>(before and after adding the Regular expresions
>> >>in the CMakeLists.txt file, running cmake and
>> >>doing "make depend" on the directory). The
>> >>depends are basically the same.
>> >>
>> >>Also when doing "make" I'm getting an error from "ld"
>> >>saying that    "VanderbiltValidation is a directory":
>> >>
>> >>It looks like it is also specified as a targer for ld.
>> >>
>> >>This is Lydia's directory for validation, maybe she have
>> >>some hints...
>> >>
>> >>Luis
>> >>
>> >>
>> >>======================
>> >>
>> >>William A. Hoffman wrote:
>> >>
>> >>>Something strange is going on here.....
>> >>>
>> >>>I tried on a cygwin build, see the attached depend file.
>> >>>
>> >>>This is in Examples/MultiResMIRegistration/  right?
>> >>>
>> >>>This looks strange to me:
>> >>>Common/MultiResMIRegistration.o :
>> >>>
>> >>>Where did the Common/ come from??
>> >>>
>> >>>-Bill
>> >>>
>> >>
>> >>
>> >>
>> >># .o dependencies in this directory.
>> >>MIRegistrationApp.o : \
>> >>/home/hoffman/Insight/Examples/MultiResMIRegistration/MIRegi
>> strationApp.h \
>> >>/home/hoffman/Insight/Code/Common/itkImage.h \
>> >>/home/hoffman/Insight/Code/Common/itkImageToImageFilter.txx \
>> >>/home/hoffman/Insight/Code/Algorithms/itkMultiResolutionPyra
>> midImageFilter.txx
>> >>\
>> >>/home/hoffman/Insight/Code/BasicFilters/itkShrinkImageFilter.h \
>> >>/home/hoffman/Insight/Code/BasicFilters/itkShrinkImageFilter.txx \
>> >>/home/hoffman/Insight/Code/BasicFilters/itkCastImageFilter.h \
>> >>/home/hoffman/Insight/Code/BasicFilters/itkUnaryFunctorImage
>> Filter.h \
>> >>/home/hoffman/Insight/Code/Common/itkImageRegionIteratorWith
>> Index.h \
>> >>/home/hoffman/Insight/Code/Common/itkImageRegionIteratorWith
>> Index.txx \
>> >>/home/hoffman/Insight/Code/Common/itkImageBase.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_fastops.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vcl/vcl_cctype.h \
>> >>/home/hoffman/Insight/Code/Numerics/itkSingleValuedCostFunction.h \
>> >>/home/hoffman/Insight/Code/Numerics/itkCostFunction.h \
>> >>/home/hoffman/Insight/Code/Algorithms/itkImageToImageMetric.txx \
>> >>/home/hoffman/Insight/Code/Numerics/itkSingleValuedNonLinear
>> Optimizer.h \
>> >>/home/hoffman/Insight/Code/Numerics/itkNonLinearOptimizer.h \
>> >>/home/hoffman/Insight/Code/Numerics/itkOptimizer.h \
>> >>/home/hoffman/Insight/Code/Algorithms/itkMultiResolutionPyra
>> midImageFilter.h \
>> >>/home/hoffman/Insight/Code/Common/itkImageToImageFilter.h \
>> >>/home/hoffman/Insight/Code/Common/itkImageRegionIterator.h \
>> >>/home/hoffman/Insight/Code/Common/itkImageRegionIterator.txx \
>> >>/home/hoffman/Insight/Code/Common/itkNeighborhoodAlgorithm.h \
>> >>/home/hoffman/Insight/Code/Common/itkImageIterator.txx \
>> >>/home/hoffman/Insight/Code/Common/itkDataObject.h \
>> >>/home/hoffman/Insight/Examples/MultiResMIRegistration/MIMReg
>> istrator.txx \
>> >>/home/hoffman/Insight/Code/Common/itkCommand.h \
>> >>/home/hoffman/Insight/Code/IO/itkRawImageWriter.h \
>> >>/home/hoffman/Insight/Code/IO/itkImageWriter.h \
>> >>/home/hoffman/Insight/Code/IO/itkWriter.h \
>> >>/home/hoffman/Insight/Code/IO/itkImageWriter.txx \
>> >>/home/hoffman/Insight/Code/IO/itkRawImageWriter.txx \
>> >>/home/hoffman/Insight/Code/BasicFilters/itkResampleImageFilter.h \
>> >>/home/hoffman/Insight/Code/BasicFilters/itkResampleImageFilter.txx \
>> >>/home/hoffman/Insight/Code/BasicFilters/itkNormalizeImageFilter.h \
>> >>/home/hoffman/Insight/Code/Common/itkObjectFactoryBase.h \
>> >>/home/hoffman/Insight/Code/Common/itkOffset.h \
>> >>/home/hoffman/Insight/Code/Common/itkObject.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_transpose.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_matrix.txx \
>> >>/home/hoffman/Insight/Code/Common/itkAffineTransform.txx \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_matops.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_diag_matrix.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vcl/vcl_cstdio.h \
>> >>/home/hoffman/Insight/Examples/MultiResMIRegistration/MIMReg
>> istrator.h \
>> >>/home/hoffman/Insight/Code/Algorithms/itkMultiResolutionImag
>> eRegistrationMethod.h
>> >>\
>> >>/home/hoffman/Insight/Code/Algorithms/itkImageToImageMetric.h \
>> >>/home/hoffman/Insight/Code/Common/itkInterpolateImageFunction.h \
>> >>/home/hoffman/Insight/Code/Common/itkImageFunction.h \
>> >>/home/hoffman/Insight/Code/Common/itkFunctionBase.h \
>> >>/home/hoffman/Insight/Code/Common/itkImageFunction.txx \
>> >>/home/hoffman/Insight/Code/Common/itkImageSource.txx \
>> >>/home/hoffman/Insight/Code/Common/itkObjectFactory.h \
>> >>/home/hoffman/Insight/Code/Common/itkIndex.h \
>> >>/home/hoffman/Insight/Code/Common/itkLightObject.h \
>> >>/home/hoffman/Insight/Code/Common/itkMutexLock.h \
>> >>/home/hoffman/Insight/Code/Common/itkCreateObjectFunction.h \
>> >>/home/hoffman/Insight/Code/Common/itkSmartPointer.h \
>> >>/home/hoffman/Insight/Code/Common/itkIndent.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_vector_ref.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vcl/vcl_iosfwd.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_error.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_c_vector.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vcl/vcl_compiler.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vcl/vcl_string.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_tag.h \
>> >>/home/hoffman/Insight-gcc/Code/Numerics/vxl/vcl/vcl_config_m
>> anual.h \
>> >>/home/hoffman/Insight-gcc/Code/Numerics/vxl/vcl/vcl_config_c
>> ompiler.h \
>> >>/home/hoffman/Insight-gcc/Code/Numerics/vxl/vcl/vcl_config_h
>> eaders.h \
>> >>/home/hoffman/Insight/Code/Common/itkVector.txx \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_math.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_numeric_traits.h \
>> >>/home/hoffman/Insight/Code/Common/itkWindows.h \
>> >>/home/hoffman/Insight/Code/Common/itkMacro.h \
>> >>/home/hoffman/Insight/Code/Common/itkWeakPointer.h \
>> >>/home/hoffman/Insight/Code/Common/itkTimeStamp.h \
>> >>/home/hoffman/Insight/Code/Common/itkSimpleFastMutexLock.h \
>> >>/home/hoffman/Insight/Code/Common/itkEventObject.h \
>> >>/home/hoffman/Insight/Code/Common/itkSmartPointerForwardRefe
>> rence.h \
>> >>/home/hoffman/Insight/Code/Common/itkProcessObject.h \
>> >>/home/hoffman/Insight/Code/Common/itkImportImageContainer.txx \
>> >>/home/hoffman/Insight/Code/Common/itkDefaultPixelAccessor.h \
>> >>/home/hoffman/Insight/Code/Common/itkMultiThreader.h \
>> >>/home/hoffman/Insight/Code/Common/itkAffineTransform.h \
>> >>/home/hoffman/Insight/Code/Common/itkMatrix.h \
>> >>/home/hoffman/Insight/Code/Common/itkSize.h \
>> >>/home/hoffman/Insight/Code/Common/itkImageRegion.h \
>> >>/home/hoffman/Insight/Code/Common/itkRegion.h \
>> >>/home/hoffman/Insight/Code/Common/itkContinuousIndex.h \
>> >>/home/hoffman/Insight/Code/Common/itkPoint.h \
>> >>/home/hoffman/Insight/Code/Common/itkImageSource.h \
>> >>/home/hoffman/Insight/Code/Common/itkImageIterator.h \
>> >>/home/hoffman/Insight/Code/Common/itkVector.h \
>> >>/home/hoffman/Insight/Code/Common/itkFastMutexLock.h \
>> >>/home/hoffman/Insight/Code/Common/itkImportImageContainer.h \
>> >>/home/hoffman/Insight/Code/Common/itkFixedArray.h \
>> >>/home/hoffman/Insight/Code/Common/itkFixedArray.txx \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_vector.h \
>> >>/home/hoffman/Insight/Code/Common/itkWin32Header.h \
>> >>/home/hoffman/Insight-gcc/itkConfigure.h \
>> >>/home/hoffman/Insight/Code/Common/itkExceptionObject.h \
>> >>/home/hoffman/Insight/Code/Algorithms/itkRegistrationMapper.txx \
>> >>/home/hoffman/Insight/Code/Common/itkLinearInterpolateImageF
>> unction.h \
>> >>/home/hoffman/Insight/Code/Common/itkLinearInterpolateImageF
>> unction.txx \
>> >>/home/hoffman/Insight/Code/Algorithms/itkImageMapper.txx \
>> >>/home/hoffman/Insight/Code/Algorithms/itkMutualInformationIm
>> ageToImageMetric.txx
>> >>\
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_sample.h \
>> >>/home/hoffman/Insight/Code/Common/itkGaussianKernelFunction.h \
>> >>/home/hoffman/Insight/Code/Numerics/itkQuaternionRigidTransf
>> ormGradientDescentOptimizer.h
>> >>\
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_numeric_limits.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_vector.txx \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vcl/vcl_cstdlib.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vcl/vcl_vector.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vcl/vcl_iostream.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vcl/vcl_algorithm.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_complex.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_vector_fixed.txx \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vcl/vcl_cassert.h \
>> >>/home/hoffman/Insight/Code/Common/itkPoint.txx \
>> >>/home/hoffman/Insight/Code/Common/itkCovariantVector.txx \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_vector_fixed.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vcl/vcl_cstring.h \
>> >>/home/hoffman/Insight/Code/Common/itkArray.h \
>> >>/home/hoffman/Insight/Code/Common/itkArray.txx \
>> >>/home/hoffman/Insight/Code/Common/itkArray2D.h \
>> >>/home/hoffman/Insight/Code/Common/itkArray2D.txx \
>> >>/home/hoffman/Insight/Code/Common/itkTransform.txx \
>> >>/home/hoffman/Insight/Code/Common/itkImage.txx \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_matrix_fixed.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_matrix_fixed_ref.h \
>> >>/home/hoffman/Insight/Code/Common/itkMatrix.txx \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/algo/vnl_matrix_
>> inverse.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/algo/vnl_svd.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vcl/vcl_complex.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_matrix.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_c_vector.txx \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_complex_traits.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_alloc.h \
>> >>/home/hoffman/Insight/Code/Common/itkTransform.h \
>> >>/home/hoffman/Insight/Code/Common/itkCovariantVector.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vcl/vcl_cstddef.h \
>> >>/home/hoffman/Insight/Code/Common/itkImageRegion.txx \
>> >>/home/hoffman/Insight/Code/Common/itkImageBase.txx \
>> >>/home/hoffman/Insight/Code/BasicFilters/itkNeighborhoodOpera
>> torImageFilter.h \
>> >>/home/hoffman/Insight/Code/Common/itkImageBoundaryCondition.h \
>> >>/home/hoffman/Insight/Code/BasicFilters/itkNeighborhoodOpera
>> torImageFilter.txx
>> >>\
>> >>/home/hoffman/Insight/Code/Common/itkConstNeighborhoodIterator.h \
>> >>/home/hoffman/Insight/Code/Common/itkConstNeighborhoodIterator.txx \
>> >>/home/hoffman/Insight/Code/Common/itkNeighborhoodIterator.txx \
>> >>/home/hoffman/Insight/Code/Common/itkNeighborhoodAlgorithm.txx \
>> >>/home/hoffman/Insight/Code/Common/itkNumericTraits.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vcl/vcl_cmath.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vcl/vcl_complex_fwd.h \
>> >>/home/hoffman/Insight/Code/Common/itkGaussianOperator.h \
>> >>/home/hoffman/Insight/Code/Common/itkNeighborhoodOperator.h \
>> >>/home/hoffman/Insight/Code/Common/itkNeighborhood.h \
>> >>/home/hoffman/Insight/Code/Common/itkImageIteratorWithIndex.h \
>> >>/home/hoffman/Insight/Code/Common/itkNeighborhoodIterator.h \
>> >>/home/hoffman/Insight/Code/Common/itkNeighborhoodAllocator.h \
>> >>/home/hoffman/Insight/Code/Common/itkSliceIterator.h \
>> >>/home/hoffman/Insight/Code/Common/itkNeighborhood.txx \
>> >>/home/hoffman/Insight/Code/Common/itkNeighborhoodOperator.txx \
>> >>/home/hoffman/Insight/Code/Common/itkGaussianOperator.txx \
>> >>/home/hoffman/Insight/Code/Common/itkQuaternionRigidTransform.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_quaternion.h \
>> >>/home/hoffman/Insight/Code/Common/itkQuaternionRigidTransform.txx \
>> >>/home/hoffman/Insight/Code/Algorithms/itkMutualInformationIm
>> ageToImageMetric.h
>> >>\
>> >>/home/hoffman/Insight/Code/Common/itkKernelFunction.h \
>> >>/home/hoffman/Insight/Code/Common/itkCentralDifferenceImageF
>> unction.h \
>> >>/home/hoffman/Insight/Code/Common/itkCentralDifferenceImageF
>> unction.txx \
>> >>/home/hoffman/Insight/Code/Algorithms/itkImageMapper.h \
>> >>/home/hoffman/Insight/Code/Algorithms/itkRegistrationMapper.h \
>> >>/home/hoffman/Insight/Code/Common/itkImageIteratorWithIndex.txx \
>> >>/home/hoffman/Insight/Code/BasicFilters/itkUnaryFunctorImage
>> Filter.txx \
>> >>/home/hoffman/Insight/Code/BasicFilters/itkDiscreteGaussianI
>> mageFilter.h \
>> >>/home/hoffman/Insight/Code/BasicFilters/itkDiscreteGaussianI
>> mageFilter.txx \
>> >>/home/hoffman/Insight/Code/Common/itkConstSliceIterator.h \
>> >>/home/hoffman/Insight/Code/Common/itkConstSmartNeighborhoodI
>> terator.txx \
>> >>/home/hoffman/Insight/Code/Common/itkSmartNeighborhoodIterator.txx \
>> >>/home/hoffman/Insight/Code/Common/itkNeighborhoodInnerProduct.h \
>> >>/home/hoffman/Insight/Code/Common/itkSmartNeighborhoodIterator.h \
>> >>/home/hoffman/Insight/Code/Common/itkConstSmartNeighborhoodI
>> terator.h \
>> >>/home/hoffman/Insight/Code/Common/itkByteSwapper.txx \
>> >>/home/hoffman/Insight/Code/Common/itkZeroFluxNeumannBoundary
>> Condition.h \
>> >>/home/hoffman/Insight/Code/Numerics/itkGradientDescentOptimizer.h \
>> >>/home/hoffman/Insight/Code/Common/itkByteSwapper.h \
>> >>/home/hoffman/Insight/Code/Common/itkZeroFluxNeumannBoundary
>> Condition.txx \
>> >>/home/hoffman/Insight/Code/BasicFilters/itkStatisticsImageFilter.h \
>> >>/home/hoffman/Insight/Code/BasicFilters/itkStatisticsImageFi
>> lter.txx \
>> >>/home/hoffman/Insight/Code/BasicFilters/itkShiftScaleImageFilter.h \
>> >>/home/hoffman/Insight/Code/BasicFilters/itkShiftScaleImageFi
>> lter.txx \
>> >>/home/hoffman/Insight/Code/BasicFilters/itkNormalizeImageFil
>> ter.txx \
>> >>/home/hoffman/Insight/Code/Common/itkNeighborhoodInnerProduct.txx \
>> >>/home/hoffman/Insight/Code/Algorithms/itkMultiResolutionImag
>> eRegistrationMethod.txx
>> >>\
>> >>/home/hoffman/Insight/Code/Algorithms/itkRecursiveMultiResol
>> utionPyramidImageFilter.h
>> >>\
>> >>/home/hoffman/Insight/Code/Algorithms/itkRecursiveMultiResol
>> utionPyramidImageFilter.txx
>> >>
>> >>MultiResMIRegistration.o : \
>> >>/home/hoffman/Insight/Examples/MultiResMIRegistration/MIRegi
>> strationApp.h \
>> >>/home/hoffman/Insight/Code/Common/itkImage.h \
>> >>/home/hoffman/Insight/Code/Common/itkImageToImageFilter.txx \
>> >>/home/hoffman/Insight/Code/Algorithms/itkMultiResolutionPyra
>> midImageFilter.txx
>> >>\
>> >>/home/hoffman/Insight/Code/BasicFilters/itkShrinkImageFilter.h \
>> >>/home/hoffman/Insight/Code/BasicFilters/itkShrinkImageFilter.txx \
>> >>/home/hoffman/Insight/Code/BasicFilters/itkCastImageFilter.h \
>> >>/home/hoffman/Insight/Code/BasicFilters/itkUnaryFunctorImage
>> Filter.h \
>> >>/home/hoffman/Insight/Code/Common/itkImageRegionIteratorWith
>> Index.h \
>> >>/home/hoffman/Insight/Code/Common/itkImageRegionIteratorWith
>> Index.txx \
>> >>/home/hoffman/Insight/Code/Common/itkImageBase.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_fastops.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vcl/vcl_cctype.h \
>> >>/home/hoffman/Insight/Code/Numerics/itkSingleValuedCostFunction.h \
>> >>/home/hoffman/Insight/Code/Numerics/itkCostFunction.h \
>> >>/home/hoffman/Insight/Code/Algorithms/itkImageToImageMetric.txx \
>> >>/home/hoffman/Insight/Code/Numerics/itkSingleValuedNonLinear
>> Optimizer.h \
>> >>/home/hoffman/Insight/Code/Numerics/itkNonLinearOptimizer.h \
>> >>/home/hoffman/Insight/Code/Numerics/itkOptimizer.h \
>> >>/home/hoffman/Insight/Code/Algorithms/itkMultiResolutionPyra
>> midImageFilter.h \
>> >>/home/hoffman/Insight/Code/Common/itkImageToImageFilter.h \
>> >>/home/hoffman/Insight/Code/Common/itkImageRegionIterator.h \
>> >>/home/hoffman/Insight/Code/Common/itkImageRegionIterator.txx \
>> >>/home/hoffman/Insight/Code/Common/itkNeighborhoodAlgorithm.h \
>> >>/home/hoffman/Insight/Code/Common/itkImageIterator.txx \
>> >>/home/hoffman/Insight/Code/Common/itkDataObject.h \
>> >>/home/hoffman/Insight/Examples/MultiResMIRegistration/MIMReg
>> istrator.txx \
>> >>/home/hoffman/Insight/Code/Common/itkCommand.h \
>> >>/home/hoffman/Insight/Code/Common/itkObjectFactoryBase.h \
>> >>/home/hoffman/Insight/Code/Common/itkOffset.h \
>> >>/home/hoffman/Insight/Code/Common/itkObject.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_transpose.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_matrix.txx \
>> >>/home/hoffman/Insight/Code/Common/itkAffineTransform.txx \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_matops.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_diag_matrix.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vcl/vcl_cstdio.h \
>> >>/home/hoffman/Insight/Examples/MultiResMIRegistration/MIMReg
>> istrator.h \
>> >>/home/hoffman/Insight/Code/Algorithms/itkMultiResolutionImag
>> eRegistrationMethod.h
>> >>\
>> >>/home/hoffman/Insight/Code/Algorithms/itkImageToImageMetric.h \
>> >>/home/hoffman/Insight/Code/Common/itkInterpolateImageFunction.h \
>> >>/home/hoffman/Insight/Code/Common/itkImageFunction.h \
>> >>/home/hoffman/Insight/Code/Common/itkFunctionBase.h \
>> >>/home/hoffman/Insight/Code/Common/itkImageFunction.txx \
>> >>/home/hoffman/Insight/Code/Common/itkImageSource.txx \
>> >>/home/hoffman/Insight/Code/Common/itkObjectFactory.h \
>> >>/home/hoffman/Insight/Code/Common/itkIndex.h \
>> >>/home/hoffman/Insight/Code/Common/itkLightObject.h \
>> >>/home/hoffman/Insight/Code/Common/itkMutexLock.h \
>> >>/home/hoffman/Insight/Code/Common/itkCreateObjectFunction.h \
>> >>/home/hoffman/Insight/Code/Common/itkSmartPointer.h \
>> >>/home/hoffman/Insight/Code/Common/itkIndent.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_vector_ref.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vcl/vcl_iosfwd.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_error.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_c_vector.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vcl/vcl_compiler.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vcl/vcl_string.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_tag.h \
>> >>/home/hoffman/Insight-gcc/Code/Numerics/vxl/vcl/vcl_config_m
>> anual.h \
>> >>/home/hoffman/Insight-gcc/Code/Numerics/vxl/vcl/vcl_config_c
>> ompiler.h \
>> >>/home/hoffman/Insight-gcc/Code/Numerics/vxl/vcl/vcl_config_h
>> eaders.h \
>> >>/home/hoffman/Insight/Code/Common/itkVector.txx \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_math.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_numeric_traits.h \
>> >>/home/hoffman/Insight/Code/Common/itkWindows.h \
>> >>/home/hoffman/Insight/Code/Common/itkMacro.h \
>> >>/home/hoffman/Insight/Code/Common/itkWeakPointer.h \
>> >>/home/hoffman/Insight/Code/Common/itkTimeStamp.h \
>> >>/home/hoffman/Insight/Code/Common/itkSimpleFastMutexLock.h \
>> >>/home/hoffman/Insight/Code/Common/itkEventObject.h \
>> >>/home/hoffman/Insight/Code/Common/itkSmartPointerForwardRefe
>> rence.h \
>> >>/home/hoffman/Insight/Code/Common/itkProcessObject.h \
>> >>/home/hoffman/Insight/Code/Common/itkImportImageContainer.txx \
>> >>/home/hoffman/Insight/Code/Common/itkDefaultPixelAccessor.h \
>> >>/home/hoffman/Insight/Code/Common/itkMultiThreader.h \
>> >>/home/hoffman/Insight/Code/Common/itkAffineTransform.h \
>> >>/home/hoffman/Insight/Code/Common/itkMatrix.h \
>> >>/home/hoffman/Insight/Code/Common/itkSize.h \
>> >>/home/hoffman/Insight/Code/Common/itkImageRegion.h \
>> >>/home/hoffman/Insight/Code/Common/itkRegion.h \
>> >>/home/hoffman/Insight/Code/Common/itkContinuousIndex.h \
>> >>/home/hoffman/Insight/Code/Common/itkPoint.h \
>> >>/home/hoffman/Insight/Code/Common/itkImageSource.h \
>> >>/home/hoffman/Insight/Code/Common/itkImageIterator.h \
>> >>/home/hoffman/Insight/Code/Common/itkVector.h \
>> >>/home/hoffman/Insight/Code/Common/itkFastMutexLock.h \
>> >>/home/hoffman/Insight/Code/Common/itkImportImageContainer.h \
>> >>/home/hoffman/Insight/Code/Common/itkFixedArray.h \
>> >>/home/hoffman/Insight/Code/Common/itkFixedArray.txx \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_vector.h \
>> >>/home/hoffman/Insight/Code/Common/itkWin32Header.h \
>> >>/home/hoffman/Insight-gcc/itkConfigure.h \
>> >>/home/hoffman/Insight/Code/Common/itkExceptionObject.h \
>> >>/home/hoffman/Insight/Code/Algorithms/itkRegistrationMapper.txx \
>> >>/home/hoffman/Insight/Code/Common/itkLinearInterpolateImageF
>> unction.h \
>> >>/home/hoffman/Insight/Code/Common/itkLinearInterpolateImageF
>> unction.txx \
>> >>/home/hoffman/Insight/Code/Algorithms/itkImageMapper.txx \
>> >>/home/hoffman/Insight/Code/Algorithms/itkMutualInformationIm
>> ageToImageMetric.txx
>> >>\
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_sample.h \
>> >>/home/hoffman/Insight/Code/Common/itkGaussianKernelFunction.h \
>> >>/home/hoffman/Insight/Code/Numerics/itkQuaternionRigidTransf
>> ormGradientDescentOptimizer.h
>> >>\
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_numeric_limits.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_vector.txx \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vcl/vcl_cstdlib.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vcl/vcl_vector.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vcl/vcl_iostream.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vcl/vcl_algorithm.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_complex.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_vector_fixed.txx \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vcl/vcl_cassert.h \
>> >>/home/hoffman/Insight/Code/Common/itkPoint.txx \
>> >>/home/hoffman/Insight/Code/Common/itkCovariantVector.txx \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_vector_fixed.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vcl/vcl_cstring.h \
>> >>/home/hoffman/Insight/Code/Common/itkArray.h \
>> >>/home/hoffman/Insight/Code/Common/itkArray.txx \
>> >>/home/hoffman/Insight/Code/Common/itkArray2D.h \
>> >>/home/hoffman/Insight/Code/Common/itkArray2D.txx \
>> >>/home/hoffman/Insight/Code/Common/itkTransform.txx \
>> >>/home/hoffman/Insight/Code/Common/itkImage.txx \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_matrix_fixed.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_matrix_fixed_ref.h \
>> >>/home/hoffman/Insight/Code/Common/itkMatrix.txx \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/algo/vnl_matrix_
>> inverse.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/algo/vnl_svd.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vcl/vcl_complex.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_matrix.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_c_vector.txx \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_complex_traits.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_alloc.h \
>> >>/home/hoffman/Insight/Code/Common/itkTransform.h \
>> >>/home/hoffman/Insight/Code/Common/itkCovariantVector.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vcl/vcl_cstddef.h \
>> >>/home/hoffman/Insight/Code/Common/itkImageRegion.txx \
>> >>/home/hoffman/Insight/Code/Common/itkImageBase.txx \
>> >>/home/hoffman/Insight/Code/BasicFilters/itkNeighborhoodOpera
>> torImageFilter.h \
>> >>/home/hoffman/Insight/Code/Common/itkImageBoundaryCondition.h \
>> >>/home/hoffman/Insight/Code/BasicFilters/itkNeighborhoodOpera
>> torImageFilter.txx
>> >>\
>> >>/home/hoffman/Insight/Code/Common/itkConstNeighborhoodIterator.h \
>> >>/home/hoffman/Insight/Code/Common/itkConstNeighborhoodIterator.txx \
>> >>/home/hoffman/Insight/Code/Common/itkNeighborhoodIterator.txx \
>> >>/home/hoffman/Insight/Code/Common/itkNeighborhoodAlgorithm.txx \
>> >>/home/hoffman/Insight/Code/Common/itkNumericTraits.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vcl/vcl_cmath.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vcl/vcl_complex_fwd.h \
>> >>/home/hoffman/Insight/Code/Common/itkGaussianOperator.h \
>> >>/home/hoffman/Insight/Code/Common/itkNeighborhoodOperator.h \
>> >>/home/hoffman/Insight/Code/Common/itkNeighborhood.h \
>> >>/home/hoffman/Insight/Code/Common/itkImageIteratorWithIndex.h \
>> >>/home/hoffman/Insight/Code/Common/itkNeighborhoodIterator.h \
>> >>/home/hoffman/Insight/Code/Common/itkNeighborhoodAllocator.h \
>> >>/home/hoffman/Insight/Code/Common/itkSliceIterator.h \
>> >>/home/hoffman/Insight/Code/Common/itkNeighborhood.txx \
>> >>/home/hoffman/Insight/Code/Common/itkNeighborhoodOperator.txx \
>> >>/home/hoffman/Insight/Code/Common/itkGaussianOperator.txx \
>> >>/home/hoffman/Insight/Code/Common/itkQuaternionRigidTransform.h \
>> >>/home/hoffman/Insight/Code/Numerics/vxl/vnl/vnl_quaternion.h \
>> >>/home/hoffman/Insight/Code/Common/itkQuaternionRigidTransform.txx \
>> >>/home/hoffman/Insight/Code/Algorithms/itkMutualInformationIm
>> ageToImageMetric.h
>> >>\
>> >>/home/hoffman/Insight/Code/Common/itkKernelFunction.h \
>> >>/home/hoffman/Insight/Code/Common/itkCentralDifferenceImageF
>> unction.h \
>> >>/home/hoffman/Insight/Code/Common/itkCentralDifferenceImageF
>> unction.txx \
>> >>/home/hoffman/Insight/Code/Algorithms/itkImageMapper.h \
>> >>/home/hoffman/Insight/Code/Algorithms/itkRegistrationMapper.h \
>> >>/home/hoffman/Insight/Code/Common/itkImageIteratorWithIndex.txx \
>> >>/home/hoffman/Insight/Code/BasicFilters/itkUnaryFunctorImage
>> Filter.txx \
>> >>/home/hoffman/Insight/Code/BasicFilters/itkDiscreteGaussianI
>> mageFilter.h \
>> >>/home/hoffman/Insight/Code/BasicFilters/itkDiscreteGaussianI
>> mageFilter.txx \
>> >>/home/hoffman/Insight/Code/Common/itkConstSliceIterator.h \
>> >>/home/hoffman/Insight/Code/Common/itkConstSmartNeighborhoodI
>> terator.txx \
>> >>/home/hoffman/Insight/Code/Common/itkSmartNeighborhoodIterator.txx \
>> >>/home/hoffman/Insight/Code/Common/itkNeighborhoodInnerProduct.h \
>> >>/home/hoffman/Insight/Code/Common/itkSmartNeighborhoodIterator.h \
>> >>/home/hoffman/Insight/Code/Common/itkConstSmartNeighborhoodI
>> terator.h \
>> >>/home/hoffman/Insight/Code/Common/itkZeroFluxNeumannBoundary
>> Condition.h \
>> >>/home/hoffman/Insight/Code/Numerics/itkGradientDescentOptimizer.h \
>> >>/home/hoffman/Insight/Code/Common/itkZeroFluxNeumannBoundary
>> Condition.txx \
>> >>/home/hoffman/Insight/Code/Common/itkNeighborhoodInnerProduct.txx \
>> >>/home/hoffman/Insight/Code/Algorithms/itkMultiResolutionImag
>> eRegistrationMethod.txx
>> >>\
>> >>/home/hoffman/Insight/Code/Algorithms/itkRecursiveMultiResol
>> utionPyramidImageFilter.h
>> >>\
>> >>/home/hoffman/Insight/Code/Algorithms/itkRecursiveMultiResol
>> utionPyramidImageFilter.txx
>> >>
>> >># .o dependencies in this directory.
>> >>Common/MultiResMIRegistration.o : \
>> >>/home/ibanez/test/Insight/Code/Common/itkExceptionObject.h \
>> >>/home/ibanez/test/Insight/Code/Common/itkWin32Header.h
>> >>
>> >>VanderbiltValidation/VanderbiltValidation.o : \
>> >>/home/ibanez/test/Insight/Code/Common/itkExceptionObject.h \
>> >>/home/ibanez/test/Insight/Code/Common/itkWin32Header.h
>> >
>> >
>> >
>> >
>> >_______________________________________________
>> >Insight-developers mailing list
>> >Insight-developers@public.kitware.com
>> >http://public.kitware.com/mailman/listinfo/insight-developers
>> >_______________________________________________
>> >Insight-developers mailing list
>> >Insight-developers@public.kitware.com
>> >http://public.kitware.com/mailman/listinfo/insight-developers 
>> 
>> 
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