[Insight-developers] reading 3D tiff (/dcm pair Mevis)

Bill Lorensen bill.lorensen at gmail.com
Sun Sep 21 17:39:15 EDT 2008


Mathieu,

I now have a VS6 installation courtesy of Kitware. I have checked out
gdcm2. 'll look at the gdcm2 port over the next few weeks.

Bill

On Sun, Sep 21, 2008 at 3:22 PM, Mathieu Malaterre
<mathieu.malaterre at gmail.com> wrote:
> Just FYI,
>
>  GDCM 1.2.4 (currently integrated in ITK) does compile with VS 6.
>  GDCM 2.0.8 (currently only available only as external package on
> sf.net) does not compile with VS6
>
> 2cts
>
> On Sat, Sep 20, 2008 at 11:43 PM, Luis Ibanez <luis.ibanez at kitware.com> wrote:
>>
>> Hi Rashindra,
>>
>>
>> The current version of GDCM does not support Visual Studio 6.0,
>> which is one of the platforms used in ITK.
>>
>>
>> This issue should be resolved before we update the version
>> of GDCM that is distributed with ITK.
>>
>> The two obvious options are:
>>
>>    1) modify GDCM to support Visual Studio 6.0
>>
>>    2) Drop the support for Visual Studio 6.0 in ITK
>>
>>
>>  Regards
>>
>>
>>     Luis
>>
>>
>> -----------------------------
>> Rashindra Manniesing wrote:
>>>
>>> HI Mathieu,
>>>
>>> Actually, the dcm file is used as separate and single header file (and the
>>> latest gdcm version is able to read this, but not the version shipped with
>>> itk); the tiff file is a 3D image (possibly 4D, with time unfolded in 3D),
>>> which again is readable by the latest libtiff, but not with the current
>>> version included with itk. Hence, my questions on updating these external
>>> libraries.
>>> Best regards,
>>> Rashindra
>>>
>>>
>>> -----Original Message-----
>>> From: Mathieu Malaterre [mailto:mathieu.malaterre at gmail.com] Sent: Friday,
>>> September 19, 2008 13:32
>>> To: Rashindra Manniesing
>>> Cc: insight-developers at itk.org
>>> Subject: Re: [Insight-developers] reading 3D tiff (/dcm pair Mevis)
>>>
>>> GDCM does support (to some extent) multi frames DICOM files. So simply
>>> try to read your file as if it was a regular DICOM and that should do
>>> it.
>>>
>>> 2cts
>>>
>>> On Fri, Sep 19, 2008 at 9:21 AM, Rashindra Manniesing
>>> <r.manniesing at erasmusmc.nl> wrote:
>>>
>>>> Dear all,
>>>>
>>>>
>>>>
>>>> I am interested in extending the itk imageIO factor to support the
>>>> (Mevis)
>>>> dcm/tiff file format (3D).
>>>>
>>>>
>>>>
>>>> It seems that the current tiff fileformat only supports 2D files.
>>>> However,
>>>> since ITK uses libtiff, it should be easy to extend to 3D.
>>>>
>>>>
>>>>
>>>> My questions:
>>>>
>>>>
>>>>
>>>> -          the current libtiff version in itk does not seem to be the
>>>> most
>>>> recent one. Can we expect an update in the near future?
>>>>
>>>> -          Same question for gdcm
>>>>
>>>> -          Who is managing these libraries in itk, perhaps we can
>>>> communicate directly.
>>>>
>>>>
>>>>
>>>>
>>>>
>>>> A possibility, as single user, is to simply use external libraries
>>>
>>> (setting
>>>
>>>> with cmake), but I suppose updating to the latest versions of these
>>>
>>> packages
>>>
>>>> would be beneficial for the general audience,
>>>>
>>>>
>>>>
>>>> Best regards,
>>>>
>>>>
>>>>
>>>> Rashindra Manniesing.
>>>>
>>>>
>>>>
>>>>
>>>>
>>>> _______________________________________________
>>>> Insight-developers mailing list
>>>> Insight-developers at itk.org
>>>> http://www.itk.org/mailman/listinfo/insight-developers
>>>>
>>>>
>>>
>>>
>>>
>>>
>>
>
>
>
> --
> Mathieu
> _______________________________________________
> Insight-developers mailing list
> Insight-developers at itk.org
> http://www.itk.org/mailman/listinfo/insight-developers
>


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