[Insight-developers] ITK wrapping status

[Michal Suchanek]

2010/10/21 Gaëtan Lehmann <gaetan.lehmann at jouy.inra.fr>:
>
> Le 20 oct. 10 à 22:46, Michal Suchanek a écrit :
>
>> Hello
>>
>> 2010/10/20 Gaëtan Lehmann <gaetan.lehmann at jouy.inra.fr>:
>>>
>>> Le 20 oct. 10 à 13:12, Michal Suchanek a écrit :
>>>
>>>> 2010/10/20 Gaëtan Lehmann <gaetan.lehmann at jouy.inra.fr>:
>>>>>
>>>>> Hi Michal,
>>>>>
>>>>> This bug is fixed in the last svn version.
>>>>> Make sure to also update your ITK copy: I've just fixed a bug which was
>>>>> preventing WrapITK to build.
>>>>>
>>>>> Gaëtan
>>>>>
>>>>
>>>> Doing some test builds right now but they will take very long since
>>>> WrapITK is large and fails to build in parallel.
>>>>
>>>
>>> WrapITK does build in parallel. It is build nightly on 4 different hosts
>>> with at leas 6 parallel jobs for more that a year without any problem on
>>> that side.
>>>
>>> Some error message would help a lot to understand what is going wrong
>>> with
>>> your build.
>>
>> Obviously the gdcm included in ITK cannot be used for building
>> anything when installed.
>>
>> The parallel build just gets to gdcm early.
>>
>> I gave up on trying to build anything against that mess, reinstalled a
>> gdcm release and pointed WrapITK to it.
>>
>>>
>>>> It looks like WrapITK now gets past the point where it failed
>>>> previously.
>>>
>>>
>>> Great.
>>>
>>> Please let us know if you find some other problems, or if everything
>>> works
>>> as expected ;-)
>>
>> Thanks for quickly fixing the previous issues.
>>
>> There is still an error:
>>
>> [  6%] Generating wrap_itkVectorConfidenceConnectedImageFilter.xml
>> cd
>> /scratch/itk/wrapitk-read-only/obj-x86_64-linux-gnu/Libraries/SegmentationAndThreshold
>> && /usr/bin/gccxml -fxml-start=_cable
>> _
>> -fxml=/scratch/itk/wrapitk-read-only/obj-x86_64-linux-gnu/Libraries/SegmentationAndThreshold/wrap_itkVectorConfidenceConnecte
>> dImageFilter.xml --gccxml-gcc-options
>>
>> /scratch/itk/wrapitk-read-only/obj-x86_64-linux-gnu/Libraries/SegmentationAndThreshold/gc
>> c_xml.inc -DCSWIG -DCABLE_CONFIGURATION -DITK_MANUAL_INSTANTIATION
>> /scratch/itk/wrapitk-read-only/obj-x86_64-linux-gnu/Librarie
>>
>> s/SegmentationAndThreshold/wrap_itkVectorConfidenceConnectedImageFilter.cxx
>> ...
>>
>> /usr/include/InsightToolkit/Numerics/Statistics/itkMembershipFunctionBase.h:
>> In member function 'void itk::Statistics::Membersh
>> ipFunctionBase<TVector>::SetMeasurementVectorSize(unsigned int) [with
>> TVector = itk::CovariantVector<float, 3u>]':
>> /usr/include/InsightToolkit/Common/itkMutexLock.h:59:   instantiated from
>> here
>>
>> /usr/include/InsightToolkit/Numerics/Statistics/itkMembershipFunctionBase.h:87:
>> error: 'GetLength' is not a member of 'itk::Num
>> ericTraits<itk::CovariantVector<float, 3u> >'
>>
>> /usr/include/InsightToolkit/Numerics/Statistics/itkMembershipFunctionBase.h:
>> In member function 'void itk::Statistics::Membersh
>> ipFunctionBase<TVector>::SetMeasurementVectorSize(unsigned int) [with
>> TVector = itk::CovariantVector<float, 2u>]':
>> /usr/include/InsightToolkit/Common/itkMutexLock.h:59:   instantiated from
>> here
>>
>> /usr/include/InsightToolkit/Numerics/Statistics/itkMembershipFunctionBase.h:87:
>> error: 'GetLength' is not a member of 'itk::Num
>> ericTraits<itk::CovariantVector<float, 2u> >'
>> /usr/bin/cmake -E cmake_progress_report
>> /scratch/itk/wrapitk-read-only/obj-x86_64-linux-gnu/CMakeFiles
>> ...
>> make[3]: ***
>> [Libraries/SegmentationAndThreshold/wrap_itkVectorConfidenceConnectedImageFilter.xml]
>> Error 1
>> make[3]: Leaving directory
>> `/scratch/itk/wrapitk-read-only/obj-x86_64-linux-gnu'
>> make[2]: ***
>> [Libraries/SegmentationAndThreshold/CMakeFiles/SegmentationAndThresholdIdx.dir/all]
>> Error 2
>> make[2]: *** Waiting for unfinished jobs....
>
>
> I've just commited a fix in ITK.
> I don't know why I haven't seen that bug yesterday...
>

This does not seem to help.

It's not a missing header but a missing method: GetLength

There are some previous commits explicitly mentioning the method.

Thanks

Michal