[Insight-developers] CoSMoTest-Mac Darwin-c++-4.2-i386 : Test Failures

Mon Apr 4 10:44:26 EDT 2011

Le 4 avr. 11 à 16:32, Luis Ibanez a écrit :

> Gaetan,
>
> I'm lost now.
>
> Does this mean that the wrapping can't be run in 32 bits machines ?

The problem is with running the tests. Unless we find another way, we  
have to add a flag in the command line used to run the java tests:
  * -d32 if the build is in 32bit
  * -d64 if the build is in 64bit

This would require to add some mac os specific code in the  
CMakeLists.txt file. This is not that easy to do, because  
CMAKE_OSX_ARCHITECTURES may contain several architectures, and (I  
guess) the build architecture may also be specified with the gcc  
options.
I'd prefer let to the user the responsability to choose the  
architecture.

That's what ARCHPREFERENCE is supposed to do, but I can't make it work.

I'm looking at this problem.

Gaëtan

>
>
>     Luis
>
>
> ------------------------------------------------------
> 2011/4/4 Gaëtan Lehmann <gaetan.lehmann at jouy.inra.fr>:
>>
>> Luis,
>>
>> There is no way to add the -d32 flag at this time.
>>
>> Gaëtan
>>
>>
>>
>> Le 4 avr. 11 à 16:22, Luis Ibanez a écrit :
>>
>>> Hi Gaetan,
>>>
>>> Thanks a lot for the explanation.
>>>
>>>
>>> Alex, Mark,
>>>
>>> Could you pleas add the -d32 flag to this CosMo build ?
>>>
>>> We are getting closer to a green dashboard,...
>>>
>>> and we would like to tag ITK since this is the green
>>> period after the Modularization.
>>>
>>>
>>>  Thanks
>>>
>>>
>>>      Luis
>>>
>>>
>>> ---------------
>>> 2011/4/4 Gaëtan Lehmann <gaetan.lehmann at jouy.inra.fr>:
>>>>
>>>> Luis,
>>>>
>>>> The problem is that the /usr/bin/java is run in 64bit by default.
>>>> Adding -d32 in the command line makes the test pass.
>>>>
>>>> I'd prefer not adding that in the CMakeLists.txt though.
>>>> Mac OS should let us choose the architecture with the arch  
>>>> command or
>>>> with
>>>> the ARCHPREFERENCE environment variable, but it doesn't seem to  
>>>> work.
>>>>
>>>> If a Mac guru is around, I'd appreciate some input on how to  
>>>> choose the
>>>> architecture.
>>>>
>>>> Regards,
>>>>
>>>> Gaëtan
>>>>
>>>>
>>>>
>>>> Le 4 avr. 11 à 15:01, Luis Ibanez a écrit :
>>>>
>>>>> Alex, Mark,
>>>>>
>>>>> The build in:
>>>>>
>>>>>   CoSMoTest-Mac    Darwin-c++-4.2-i386 Notes
>>>>>
>>>>> Seems to have a configuration problem:
>>>>>
>>>>> http://www.cdash.org/CDash/viewTest.php?onlyfailed&buildid=937990
>>>>>
>>>>>
>>>>> ----
>>>>>
>>>>> BinaryDilateImageFilter Example
>>>>> Exception in thread "main" java.lang.UnsatisfiedLinkError:
>>>>>
>>>>>
>>>>> /Users/CoSMoTest-Mac/tests/ITK-i386/lib/libBaseJava.jnilib:
>>>>>
>>>>> no suitable image found.
>>>>>
>>>>> Did find:
>>>>>
>>>>> /Users/CoSMoTest-Mac/tests/ITK-i386/lib/libBaseJava.jnilib:
>>>>>
>>>>> mach-o,
>>>>> but wrong architecture
>>>>>
>>>>> /Users/CoSMoTest-Mac/tests/ITK-i386/lib/libBaseJava.jnilib:
>>>>>
>>>>> mach-o,
>>>>> but wrong architecture
>>>>>
>>>>>       at java.lang.ClassLoader$NativeLibrary.load(Native Method)
>>>>>       at java.lang.ClassLoader.loadLibrary0(ClassLoader.java:1823)
>>>>>       at java.lang.ClassLoader.loadLibrary(ClassLoader.java:1738)
>>>>>       at java.lang.Runtime.loadLibrary0(Runtime.java:823)
>>>>>       at java.lang.System.loadLibrary(System.java:1045)
>>>>>       at
>>>>>
>>>>> org 
>>>>> .itk 
>>>>> .itkjavabase.itkJavaLibraryLoader.Load(itkJavaLibraryLoader.java: 
>>>>> 43)
>>>>>       at
>>>>>
>>>>> org 
>>>>> .itk 
>>>>> .base.itkImageSourceJavaJNI.<clinit>(itkImageSourceJavaJNI.java: 
>>>>> 17)
>>>>>       at
>>>>> org.itk.base.itkImageSourceIUS2.<clinit>(itkImageSourceIUS2.java: 
>>>>> 61)
>>>>>       at  
>>>>> BinaryDilateImageFilter.main(BinaryDilateImageFilter.java:35)
>>>>> itkTestDriver: Process exited with return value: 1
>>>>>
>>>>>
>>>>>
>>>>> Could you please make sure that this is a clean build,
>>>>> and maybe take a look at its JAVA CLASSPATH and
>>>>> the LD_LIBRARY_PATH environment variables ?
>>>>>
>>>>>
>>>>>   Thanks
>>>>>
>>>>>
>>>>>         Luis
>>>>> _______________________________________________
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>>>>>
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>>>>
>>>> --
>>>> Gaëtan Lehmann
>>>> Biologie du Développement et de la Reproduction
>>>> INRA de Jouy-en-Josas (France)
>>>> tel: +33 1 34 65 29 66    fax: 01 34 65 29 09
>>>> http://voxel.jouy.inra.fr  http://www.itk.org
>>>> http://www.mandriva.org  http://www.bepo.fr
>>>>
>>>>
>>
>> --
>> Gaëtan Lehmann
>> Biologie du Développement et de la Reproduction
>> INRA de Jouy-en-Josas (France)
>> tel: +33 1 34 65 29 66    fax: 01 34 65 29 09
>> http://voxel.jouy.inra.fr  http://www.itk.org
>> http://www.mandriva.org  http://www.bepo.fr
>>
>>

-- 
Gaëtan Lehmann
Biologie du Développement et de la Reproduction
INRA de Jouy-en-Josas (France)
tel: +33 1 34 65 29 66    fax: 01 34 65 29 09
http://voxel.jouy.inra.fr  http://www.itk.org
http://www.mandriva.org  http://www.bepo.fr

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