[Insight-developers] CoSMoTest-Mac Darwin-c++-4.2-i386 : Test Failures

[Luis Ibanez]

2011/4/4 Gaëtan Lehmann <gaetan.lehmann at jouy.inra.fr>:
>
> Le 4 avr. 11 à 16:32, Luis Ibanez a écrit :
>
>> Gaetan,
>>
>> I'm lost now.
>>
>> Does this mean that the wrapping can't be run in 32 bits machines ?
>
> The problem is with running the tests. Unless we find another way, we have
> to add a flag in the command line used to run the java tests:
>  * -d32 if the build is in 32bit
>  * -d64 if the build is in 64bit
>

It looks like we just need to modify lines 37 and 55 of:

ITK/Wrapping/WrapITK/Languages/Java/Tests/CMakeLists.txt

to be:

  COMMAND ${Java_JAVAC_EXECUTABLE}   ${JAVA_ARCHITECTURE_FLAG}

instead of

COMMAND ${Java_JAVAC_EXECUTABLE}

or, maybe make their next line

 ARGS -classpath "${${cp_var}}"   ${JAVA_ARCHITECTURE_FLAG}

instead of the current

  ${JAVA_ARCHITECTURE_FLAG}


Then make
JAVA_ARCHITECTURE_FLAG a CMake Option in the
top CMakeLists.txt file.


      Luis


> This would require to add some mac os specific code in the CMakeLists.txt
> file. This is not that easy to do, because CMAKE_OSX_ARCHITECTURES may
> contain several architectures, and (I guess) the build architecture may also
> be specified with the gcc options.
> I'd prefer let to the user the responsability to choose the architecture.
>
> That's what ARCHPREFERENCE is supposed to do, but I can't make it work.
>
> I'm looking at this problem.
>
> Gaëtan
>
>>
>>
>>    Luis
>>
>>
>> ------------------------------------------------------
>> 2011/4/4 Gaëtan Lehmann <gaetan.lehmann at jouy.inra.fr>:
>>>
>>> Luis,
>>>
>>> There is no way to add the -d32 flag at this time.
>>>
>>> Gaëtan
>>>
>>>
>>>
>>> Le 4 avr. 11 à 16:22, Luis Ibanez a écrit :
>>>
>>>> Hi Gaetan,
>>>>
>>>> Thanks a lot for the explanation.
>>>>
>>>>
>>>> Alex, Mark,
>>>>
>>>> Could you pleas add the -d32 flag to this CosMo build ?
>>>>
>>>> We are getting closer to a green dashboard,...
>>>>
>>>> and we would like to tag ITK since this is the green
>>>> period after the Modularization.
>>>>
>>>>
>>>>  Thanks
>>>>
>>>>
>>>>     Luis
>>>>
>>>>
>>>> ---------------
>>>> 2011/4/4 Gaëtan Lehmann <gaetan.lehmann at jouy.inra.fr>:
>>>>>
>>>>> Luis,
>>>>>
>>>>> The problem is that the /usr/bin/java is run in 64bit by default.
>>>>> Adding -d32 in the command line makes the test pass.
>>>>>
>>>>> I'd prefer not adding that in the CMakeLists.txt though.
>>>>> Mac OS should let us choose the architecture with the arch command or
>>>>> with
>>>>> the ARCHPREFERENCE environment variable, but it doesn't seem to work.
>>>>>
>>>>> If a Mac guru is around, I'd appreciate some input on how to choose the
>>>>> architecture.
>>>>>
>>>>> Regards,
>>>>>
>>>>> Gaëtan
>>>>>
>>>>>
>>>>>
>>>>> Le 4 avr. 11 à 15:01, Luis Ibanez a écrit :
>>>>>
>>>>>> Alex, Mark,
>>>>>>
>>>>>> The build in:
>>>>>>
>>>>>>  CoSMoTest-Mac    Darwin-c++-4.2-i386 Notes
>>>>>>
>>>>>> Seems to have a configuration problem:
>>>>>>
>>>>>> http://www.cdash.org/CDash/viewTest.php?onlyfailed&buildid=937990
>>>>>>
>>>>>>
>>>>>> ----
>>>>>>
>>>>>> BinaryDilateImageFilter Example
>>>>>> Exception in thread "main" java.lang.UnsatisfiedLinkError:
>>>>>>
>>>>>>
>>>>>> /Users/CoSMoTest-Mac/tests/ITK-i386/lib/libBaseJava.jnilib:
>>>>>>
>>>>>> no suitable image found.
>>>>>>
>>>>>> Did find:
>>>>>>
>>>>>> /Users/CoSMoTest-Mac/tests/ITK-i386/lib/libBaseJava.jnilib:
>>>>>>
>>>>>> mach-o,
>>>>>> but wrong architecture
>>>>>>
>>>>>> /Users/CoSMoTest-Mac/tests/ITK-i386/lib/libBaseJava.jnilib:
>>>>>>
>>>>>> mach-o,
>>>>>> but wrong architecture
>>>>>>
>>>>>>      at java.lang.ClassLoader$NativeLibrary.load(Native Method)
>>>>>>      at java.lang.ClassLoader.loadLibrary0(ClassLoader.java:1823)
>>>>>>      at java.lang.ClassLoader.loadLibrary(ClassLoader.java:1738)
>>>>>>      at java.lang.Runtime.loadLibrary0(Runtime.java:823)
>>>>>>      at java.lang.System.loadLibrary(System.java:1045)
>>>>>>      at
>>>>>>
>>>>>>
>>>>>> org.itk.itkjavabase.itkJavaLibraryLoader.Load(itkJavaLibraryLoader.java:43)
>>>>>>      at
>>>>>>
>>>>>>
>>>>>> org.itk.base.itkImageSourceJavaJNI.<clinit>(itkImageSourceJavaJNI.java:17)
>>>>>>      at
>>>>>> org.itk.base.itkImageSourceIUS2.<clinit>(itkImageSourceIUS2.java:61)
>>>>>>      at BinaryDilateImageFilter.main(BinaryDilateImageFilter.java:35)
>>>>>> itkTestDriver: Process exited with return value: 1
>>>>>>
>>>>>>
>>>>>>
>>>>>> Could you please make sure that this is a clean build,
>>>>>> and maybe take a look at its JAVA CLASSPATH and
>>>>>> the LD_LIBRARY_PATH environment variables ?
>>>>>>
>>>>>>
>>>>>>  Thanks
>>>>>>
>>>>>>
>>>>>>        Luis
>>>>>> _______________________________________________
>>>>>> Powered by www.kitware.com
>>>>>>
>>>>>> Visit other Kitware open-source projects at
>>>>>> http://www.kitware.com/opensource/opensource.html
>>>>>>
>>>>>> Kitware offers ITK Training Courses, for more information visit:
>>>>>> http://kitware.com/products/protraining.html
>>>>>>
>>>>>> Please keep messages on-topic and check the ITK FAQ at:
>>>>>> http://www.itk.org/Wiki/ITK_FAQ
>>>>>>
>>>>>> Follow this link to subscribe/unsubscribe:
>>>>>> http://www.itk.org/mailman/listinfo/insight-developers
>>>>>
>>>>> --
>>>>> Gaëtan Lehmann
>>>>> Biologie du Développement et de la Reproduction
>>>>> INRA de Jouy-en-Josas (France)
>>>>> tel: +33 1 34 65 29 66    fax: 01 34 65 29 09
>>>>> http://voxel.jouy.inra.fr  http://www.itk.org
>>>>> http://www.mandriva.org  http://www.bepo.fr
>>>>>
>>>>>
>>>
>>> --
>>> Gaëtan Lehmann
>>> Biologie du Développement et de la Reproduction
>>> INRA de Jouy-en-Josas (France)
>>> tel: +33 1 34 65 29 66    fax: 01 34 65 29 09
>>> http://voxel.jouy.inra.fr  http://www.itk.org
>>> http://www.mandriva.org  http://www.bepo.fr
>>>
>>>
>
> --
> Gaëtan Lehmann
> Biologie du Développement et de la Reproduction
> INRA de Jouy-en-Josas (France)
> tel: +33 1 34 65 29 66    fax: 01 34 65 29 09
> http://voxel.jouy.inra.fr  http://www.itk.org
> http://www.mandriva.org  http://www.bepo.fr
>
>