[Insight-developers] Recent changes to Transforms break ITK's API

Bill Lorensen bill.lorensen at gmail.com
Mon Jul 15 16:37:18 EDT 2013


Also sorry I did not review that gerrit topic. Now I notice a number of
tests were deleted. That should be a red flag.



On Mon, Jul 15, 2013 at 4:35 PM, Bill Lorensen <bill.lorensen at gmail.com>wrote:

> I am also sorry I did not check the wiki examples until now. I will set up
> a nightly examples build against a nightly ITK.
>
>
>
> On Mon, Jul 15, 2013 at 4:33 PM, Johnson, Hans J <hans-johnson at uiowa.edu>wrote:
>
>> I tested backwards compatibility with Slicer, ANTS, BRAINSTools, DTIPrep,
>> DTIProceses, and ITK tests.  All those passed so we thought we were good
>> to go.
>>
>> Sorry about this regression.  Ali is looking into it.
>>
>> Hans
>>
>>
>> -----Original Message-----
>> From: Matt McCormick <matt.mccormick at kitware.com>
>> Date: Monday, July 15, 2013 3:31 PM
>> To: Bill Lorensen <bill.lorensen at gmail.com>
>> Cc: Hans Johnson <hans-johnson at uiowa.edu>, Ali Ghayoor
>> <ali-ghayoor at uiowa.edu>, ITK <insight-developers at itk.org>
>> Subject: Re: [Insight-developers] Recent changes to Transforms break ITK's
>> API
>>
>> On Mon, Jul 15, 2013 at 8:00 PM, Bill Lorensen <bill.lorensen at gmail.com>
>> wrote:
>> > Are these API breaking  in the 4.4 release? If not, we can wait to fix
>> >them.
>>
>> Right - the 4.4 release is unaffected, but we will want to make sure
>> 4.5.0 is backwards compatible.
>>
>> Thanks,
>> Matt
>>
>>
>> >
>> >
>> > On Mon, Jul 15, 2013 at 2:02 PM, Johnson, Hans J <
>> hans-johnson at uiowa.edu>
>> > wrote:
>> >>
>> >> Adding Ali to the conversation.
>> >>
>> >> Hans
>> >>
>> >>
>> >> -----Original Message-----
>> >> From: Matt McCormick <matt.mccormick at kitware.com>
>> >> Date: Monday, July 15, 2013 12:53 PM
>> >> To: Bill Lorensen <bill.lorensen at gmail.com>
>> >> Cc: ITK <insight-developers at itk.org>
>> >> Subject: Re: [Insight-developers] Recent changes to Transforms break
>> >> ITK's   API
>> >>
>> >> Hi Bill,
>> >>
>> >> I have added your code in this patch:
>> >>
>> >>   http://review.source.kitware.com/#/c/11961/
>> >>
>> >> It reproduces the compilation error.
>> >>
>> >>
>> >> To overcome this limitation, I propose we:
>> >>
>> >>   1) SetInput( TransformType * ) -> SetInput( LightObject * )
>> >>   2) Create a new TransformPrecisionFilter that can convert between
>> >> transform precisions
>> >>   3) Internally convert between precisions if required in
>> >> TransformFileWriter::Update()
>> >>
>> >> Thanks,
>> >> Matt
>> >>
>> >>
>> >> On Sun, Jul 14, 2013 at 3:50 PM, Bill Lorensen <
>> bill.lorensen at gmail.com>
>> >> wrote:
>> >> > BTW, if I change the type to double it compiles.
>> >> >
>> >> >
>> >> >
>> >> > On Sun, Jul 14, 2013 at 11:50 AM, Bill Lorensen
>> >> > <bill.lorensen at gmail.com>
>> >> > wrote:
>> >> >>
>> >> >> I think it works with 4.5.0(~ May 31). Probably fails because of
>> this
>> >> >> commit:
>> >> >> http://review.source.kitware.com/#/c/11396/
>> >> >>
>> >> >>
>> >> >>
>> >> >>
>> >> >>
>> >> >> On Sun, Jul 14, 2013 at 11:40 AM, Matt McCormick
>> >> >> <matt.mccormick at kitware.com> wrote:
>> >> >>>
>> >> >>> Hi Bill,
>> >> >>>
>> >> >>> Did this code with 4.4.0?
>> >> >>>
>> >> >>> Thanks,
>> >> >>> Matt
>> >> >>>
>> >> >>> On Sun, Jul 14, 2013 at 11:31 AM, Bill Lorensen
>> >> >>><bill.lorensen at gmail.com>
>> >> >>> wrote:
>> >> >>> > Folks,
>> >> >>> >
>> >> >>> > When I compile the following code I get this compilation error:
>> >> >>> >
>> >> >>> >
>> >> >>> >
>> >>
>> >> >>>
>>
>> >>>>>/home/lorensen/ProjectsGIT/ITKGerrit/Modules/Remote/WikiExamples/IO/Tr
>> >>>>>an
>> >> >>>sformFileWriter.cxx:
>> >> >>> > In function Œint main(int, char**)¹:
>> >> >>> >
>> >> >>> >
>> >>
>> >> >>>
>>
>> >>>>>/home/lorensen/ProjectsGIT/ITKGerrit/Modules/Remote/WikiExamples/IO/Tr
>> >>>>>an
>> >> >>>sformFileWriter.cxx:20:
>> >> >>> > error: no matching function for call to
>> >> >>> >
>> >> >>> >
>> >>
>> >> >>>
>>
>> >>>>>Œitk::TransformFileWriterTemplate<double>::SetInput(itk::SmartPointer<
>> >>>>>it
>> >> >>>k::Rigid2DTransform<float>
>> >> >>> >>&)¹
>> >> >>> >
>> >> >>> >
>> >>
>> >> >>>
>>
>> >>>>>/home/lorensen/ProjectsGIT/ITKGerrit/Modules/IO/TransformBase/include/
>> >>>>>it
>> >> >>>kTransformFileWriter.hxx:78:
>> >> >>> > note: candidates are: void
>> >> >>> > itk::TransformFileWriterTemplate<ScalarType>::SetInput(const
>> >> >>> > itk::TransformBaseTemplate<TScalarType>*) [with ScalarType =
>> >>double]
>> >> >>> >
>> >> >>> >
>> >> >>> >
>> >>
>> >> >>>
>>
>> >>>>>----------------------------------------------------------------------
>> >>>>>--
>> >> >>>---------------------------
>> >> >>> > #include "itkRigid2DTransform.h"
>> >> >>> > #include "itkTransformFileWriter.h"
>> >> >>> >
>> >> >>> > int main(int argc, char *argv[])
>> >> >>> > {
>> >> >>> >   std::string fileName;
>> >> >>> >   if(argc == 1) // No arguments were provided
>> >> >>> >   {
>> >> >>> >     fileName = "test.tfm";
>> >> >>> >   }
>> >> >>> >   else
>> >> >>> >   {
>> >> >>> >     fileName = argv[1];
>> >> >>> >   }
>> >> >>> >
>> >> >>> >   typedef itk::Rigid2DTransform< float > TransformType;
>> >> >>> >   TransformType::Pointer transform = TransformType::New();
>> >> >>> >
>> >> >>> >   itk::TransformFileWriter::Pointer writer =
>> >> >>> > itk::TransformFileWriter::New();
>> >> >>> >   writer->SetInput(transform);
>> >> >>> >   writer->SetFileName(fileName);
>> >> >>> >   writer->Update();
>> >> >>> >
>> >> >>> >   return EXIT_SUCCESS;
>> >> >>> > }
>> >> >>> >
>> >> >>> >
>> >> >>> > _______________________________________________
>> >> >>> > Powered by www.kitware.com
>> >> >>> >
>> >> >>> > Visit other Kitware open-source projects at
>> >> >>> > http://www.kitware.com/opensource/opensource.html
>> >> >>> >
>> >> >>> > Kitware offers ITK Training Courses, for more information visit:
>> >> >>> > http://kitware.com/products/protraining.php
>> >> >>> >
>> >> >>> > Please keep messages on-topic and check the ITK FAQ at:
>> >> >>> > http://www.itk.org/Wiki/ITK_FAQ
>> >> >>> >
>> >> >>> > Follow this link to subscribe/unsubscribe:
>> >> >>> > http://www.itk.org/mailman/listinfo/insight-developers
>> >> >>> >
>> >> >>
>> >> >>
>> >> >>
>> >> >>
>> >> >> --
>> >> >> Unpaid intern in BillsBasement at noware dot com
>> >> >
>> >> >
>> >> >
>> >> >
>> >> > --
>> >> > Unpaid intern in BillsBasement at noware dot com
>> >> _______________________________________________
>> >> Powered by www.kitware.com
>> >>
>> >> Visit other Kitware open-source projects at
>> >> http://www.kitware.com/opensource/opensource.html
>> >>
>> >> Kitware offers ITK Training Courses, for more information visit:
>> >> http://kitware.com/products/protraining.php
>> >>
>> >> Please keep messages on-topic and check the ITK FAQ at:
>> >> http://www.itk.org/Wiki/ITK_FAQ
>> >>
>> >> Follow this link to subscribe/unsubscribe:
>> >> http://www.itk.org/mailman/listinfo/insight-developers
>> >>
>> >>
>> >>
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>> >
>> >
>> >
>> > --
>> > Unpaid intern in BillsBasement at noware dot com
>>
>>
>>
>> ________________________________
>> Notice: This UI Health Care e-mail (including attachments) is covered by
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>
>
>
> --
> Unpaid intern in BillsBasement at noware dot com
>



-- 
Unpaid intern in BillsBasement at noware dot com
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