[Insight-users] Re: vtk installation : Use VTK 4.2
Luis Ibanez
luis . ibanez at kitware . com
Tue, 28 Oct 2003 13:47:51 -0500
Hi Sharad,
Thanks for sending your CMakeCache.txt file.
Here is the problem:
> VTK_SOURCE_DIR:STATIC=C:/vtk40Src-1/VTK
You are using VTK 4.0
Please use VTK 4.2
----
Also note that ITK itself does not depend on VTK for
any functionality. Only some of the example applications
available in InsightApplications require VTK. For those
applications you *must* use VTK 4.2 (at least).
The version to use for ITK is 1.4, this is the latest
release of the Insight Toolkit.
---
If you goal is to read a set of 2D images for building
a 3D image, you may want to look at the ImageSeriesReader
http://www . itk . org/Insight/Doxygen/html/classitk_1_1ImageSeriesReader . html
You instantiate this class using a 3D image,
for example:
typedef itk::Image< char, 3 > ImageType;
typedef itk::ImageSeriesReader< ImageType > ReaderType;
ReaderType::Pointer reader = ReaderType;
std::vector< std::string > nameList;
reader->SetFileNames( nameList );
reader->Update();
Note that you can fill up the nameList by yourself,
or use the helper classes DICOMSeriesFileNames or
NumericSeriesFileNames in order to generate the list
of filenames to be read.
Please let us know if you find any further problems.
Thanks
Luis
----------------------------------
sharad at lynx . eng . fsu . edu wrote:
> Hi luis
> i am still not able to find the CMake variable in the advanced mode too
> i checked in the CmakeCache.txt file too but i couldnt find them
> do you think i could make a mistake in building the ALL_BUILD ?
> can i build the ITK independently without the VTK and i downloaded the
> InsightToolkit-1.4.0 is that the right one as if you remeber my aim is to
> stack 2D images to make a 3D image
> i am enclosing the CmakeCache.txt file please can you check it when you
> have time
>
> thanks a lot
> regards
> sharad
> On Mon, 27 Oct 2003 16:45:47 -0500 Luis Ibanez wrote:
>
>
>>Hi Sharad,
>>
>>The CMake variables should be there when you enable
>>the Advanced mode.
>>
>>Please look at the CMakeCache.txt file that CMake
>>generates in your VTK binary directory.
>>
>>
>>Regards,
>>
>>
>> Luis
>>
>>
>>-------------------------
>>sharad at lynx . eng . fsu . edu wrote:
>>
>>>Hi luis
>>>sorry to take your time but i cant see the variables
>>>
>>>
>>>> VTK_USE_SYSTEM_ZLIB = OFF
>>>> VTK_USE_SYSTEM_PNG = OFF
>>>
>>>when i run the CMAKE for VTK
>>>even when i use the show advanced values mode
>>>thanks for your time
>>>regards
>>>sharad
>>>On Mon, 27 Oct 2003 15:38:12 -0500 Luis Ibanez wrote:
>>>
>>>
>>>
>>>>Hi Sharad,
>>>>
>>>>Thanks for posting the error messages.
>>>>
>>>>It looks like you are having trouble linking with the
>>>>symbols of the zlib library.
>>>>
>>>>Did you enable the CMake variable for using the System's
>>>>zlib library intead of the one delivered with VTK ?
>>>>
>>>>Please rerun CMake, pass to Advanced mode and make sure
>>>>that the following variables are set to OFF
>>>>
>>>> VTK_USE_SYSTEM_ZLIB = OFF
>>>> VTK_USE_SYSTEM_PNG = OFF
>>>>
>>>>Then reconfigure, and rebuild.
>>>>
>>>>
>>>>Regards,
>>>>
>>>>
>>>> Luis
>>>>
>>>>
>>>>
>>>>-----------------------------
>>>>Sharad Kumar Somanchi wrote:
>>>>
>>>>
>>>>>Hi Luis
>>>>>i forgot to include the errors in my first email but i sent them in my
>>>>>second one did u receive them if not
>>>>>they are
>>>>>Linking...
>>>>>vtkpng.lib(pngread.obj) : error LNK2001: unresolved external symbol
>>>>>_inflateInit_
>>>>>vtkpng.lib(pngread.obj) : error LNK2001: unresolved external symbol
>>>>>_inflate
>>>>>vtkpng.lib(pngrutil.obj) : error LNK2001: unresolved external symbol
>>>>>_inflate
>>>>>vtkpng.lib(pngread.obj) : error LNK2001: unresolved external symbol
>>>>>_inflateEnd
>>>>>vtkpng.lib(png.obj) : error LNK2001: unresolved external symbol _crc32
>>>>>vtkpng.lib(png.obj) : error LNK2001: unresolved external symbol
>>>>>_inflateReset
>>>>>vtkpng.lib(pngrutil.obj) : error LNK2001: unresolved external symbol
>>>>>_inflateReset
>>>>>vtkpng.lib(pngwrite.obj) : error LNK2001: unresolved external symbol
>>>>>_deflate
>>>>>vtkpng.lib(pngwutil.obj) : error LNK2001: unresolved external symbol
>>>>>_deflate
>>>>>vtkpng.lib(pngwrite.obj) : error LNK2001: unresolved external symbol
>>>>>_deflateEnd
>>>>>vtkpng.lib(pngwutil.obj) : error LNK2001: unresolved external symbol
>>>>>_deflateInit2_
>>>>>vtkpng.lib(pngwutil.obj) : error LNK2001: unresolved external symbol
>>>>>_deflateReset
>>>>>C:\vtk40Src-1\VTK-bin\bin\RelWithDebInfo/CellLocator.exe : fatal error
>>>>>LNK1120: 9 unresolved externals
>>>>>Error executing link.exe.
>>>>>
>>>>>ALL_BUILD - 13 error(s), 0 warning(s)
>>>>>
>>>>>i am using the same compiler visual c++ 6.0
>>>>>
>>>>>thanks
>>>>>
>>>>>regards
>>>>>sharad
>>>>>
>>>>>
>>>>>
>>>>>On Mon, 27 Oct 2003, Luis Ibanez wrote:
>>>>>
>>>>>
>>>>>
>>>>>
>>>>>>Hi Sharad,
>>>>>>
>>>>>>Please post the errors message that you get.
>>>>>>
>>>>>>Posting just the number of errors may not be very useful,
>>>>>>We could only say that "13" is a bad luck number :-)
>>>>>>
>>>>>>An error executing "link" may indicate that you have
>>>>>>a problem with the installation of your compiler, or
>>>>>>that you are mixing two different compilers.
>>>>>>
>>>>>>
>>>>>>Thanks
>>>>>>
>>>>>>
>>>>>> Luis
>>>>>>
>>>>>>
>>>>>>---------------------------------
>>>>>>Sharad Kumar Somanchi wrote:
>>>>>>
>>>>>>
>>>>>>
>>>>>>>Hi luis
>>>>>>>i am having a problem building the VTK
>>>>>>>i am following the procedure for ITK installation for Windows
>>>>>>
>>and i am
>>
>>>>>>>struckup at step 3-4-5 the link to the instructions is
>>>>>>
>>>>>>http://caddlab . rad . unc . edu/publications/Tutorials/Summer-02/itk_windows
>>>>>
>>>_installation.pdf
>>>
>>>
>>>>>>>when i am buidling the ALL_BUILD project i am getting 13 errors
>>>>>>
>>and it
>>
>>>>>>>says :Error executing link.exe.
>>>>>>>
>>>>>>>ALL_BUILD - 13 error(s), 1 warning(s)
>>>>>>>
>>>>>>>what could be the problem
>>>>>>>and for installing the ITK is it enough if i download the
>>>>>>
>>>>InsightToolkit-1.4.0
>>>>
>>>>
>>>>>>>and follow the procedure
>>>>>>>thanks a lot
>>>>>>>regards
>>>>>>>sharad
>>>>>>>
>>>>>>
>>>>>>
>>>>>>
>>>>>>
>>>>
>>>
>>>
>>
>>
>
>
>
>
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> CMAKE_SIZEOF_FLOAT:INTERNAL=4
> //Size of int data type
> CMAKE_SIZEOF_INT:INTERNAL=4
> //Size of long data type
> CMAKE_SIZEOF_LONG:INTERNAL=4
> //Size of short data type
> CMAKE_SIZEOF_SHORT:INTERNAL=2
> //Size of void* data type
> CMAKE_SIZEOF_VOID_P:INTERNAL=4
> //Advanced flag for variable: CMAKE_SKIP_RPATH
> CMAKE_SKIP_RPATH-ADVANCED:INTERNAL=1
> //Advanced flag for variable: CMAKE_STANDARD_LIBRARIES
> CMAKE_STANDARD_LIBRARIES-ADVANCED:INTERNAL=1
> //Advanced flag for variable: CMAKE_USE_WIN32_THREADS
> CMAKE_USE_WIN32_THREADS-ADVANCED:INTERNAL=1
> //Advanced flag for variable: CMAKE_VERBOSE_MAKEFILE
> CMAKE_VERBOSE_MAKEFILE-ADVANCED:INTERNAL=1
> //endianness of bytes
> CMAKE_WORDS_BIGENDIAN:INTERNAL=0
> //Advanced flag for variable: COMPRESSIONCOMMAND
> COMPRESSIONCOMMAND-ADVANCED:INTERNAL=1
> //Advanced flag for variable: CVSCOMMAND
> CVSCOMMAND-ADVANCED:INTERNAL=1
> //Advanced flag for variable: CVS_UPDATE_OPTIONS
> CVS_UPDATE_OPTIONS-ADVANCED:INTERNAL=1
> //Path to an executable
> CellLocator_CMAKE_PATH:INTERNAL=C:/vtk40Src-1/VTK-bin/Graphics/Testing/Cxx
> //Advanced flag for variable: DART_BUILD_ERROR_REPORT_LIMIT
> DART_BUILD_ERROR_REPORT_LIMIT-ADVANCED:INTERNAL=1
> //Advanced flag for variable: DART_BUILD_WARNING_REPORT_LIMIT
> DART_BUILD_WARNING_REPORT_LIMIT-ADVANCED:INTERNAL=1
> //Advanced flag for variable: DART_TESTING_TIMEOUT
> DART_TESTING_TIMEOUT-ADVANCED:INTERNAL=1
> //Advanced flag for variable: DART_VERBOSE_BUILD
> DART_VERBOSE_BUILD-ADVANCED:INTERNAL=1
> //Advanced flag for variable: DELIVER_CONTINUOUS_EMAIL
> DELIVER_CONTINUOUS_EMAIL-ADVANCED:INTERNAL=1
> //Advanced flag for variable: EXECUTABLE_OUTPUT_PATH
> EXECUTABLE_OUTPUT_PATH-ADVANCED:INTERNAL=1
> //Path to an executable
> FrustumClip_CMAKE_PATH:INTERNAL=C:/vtk40Src-1/VTK-bin/Graphics/Testing/Cxx
> //Advanced flag for variable: GUNZIPCOMMAND
> GUNZIPCOMMAND-ADVANCED:INTERNAL=1
> //Path to an executable
> ImportExport_CMAKE_PATH:INTERNAL=C:/vtk40Src-1/VTK-bin/Imaging/Testing/Cxx
> //Advanced flag for variable: JAVACOMMAND
> JAVACOMMAND-ADVANCED:INTERNAL=1
> //Advanced flag for variable: LIBRARY_OUTPUT_PATH
> LIBRARY_OUTPUT_PATH-ADVANCED:INTERNAL=1
> //Advanced flag for variable: MAKECOMMAND
> MAKECOMMAND-ADVANCED:INTERNAL=1
> //Path to an executable
> Mace_CMAKE_PATH:INTERNAL=C:/vtk40Src-1/VTK-bin/Graphics/Testing/Cxx
> //Advanced flag for variable: OPENGL_gl_LIBRARY
> OPENGL_gl_LIBRARY-ADVANCED:INTERNAL=1
> //Advanced flag for variable: OPENGL_glu_LIBRARY
> OPENGL_glu_LIBRARY-ADVANCED:INTERNAL=1
> //Path to an executable
> ObjectFactory_CMAKE_PATH:INTERNAL=C:/vtk40Src-1/VTK-bin/Common/Testing/Cxx
> //Advanced flag for variable: PURIFYCOMMAND
> PURIFYCOMMAND-ADVANCED:INTERNAL=1
> //Path to an executable
> PointLocator_CMAKE_PATH:INTERNAL=C:/vtk40Src-1/VTK-bin/Graphics/Testing/Cxx
> //Path to an executable
> RGrid_CMAKE_PATH:INTERNAL=C:/vtk40Src-1/VTK-bin/Graphics/Testing/Cxx
> //Advanced flag for variable: SCPCOMMAND
> SCPCOMMAND-ADVANCED:INTERNAL=1
> //Advanced flag for variable: SITE
> SITE-ADVANCED:INTERNAL=1
> //Advanced flag for variable: TCL_TCLSH
> TCL_TCLSH-ADVANCED:INTERNAL=1
> //Path to an executable
> TimeRenderer2_CMAKE_PATH:INTERNAL=C:/vtk40Src-1/VTK-bin/Rendering/Testing/Cxx
> //Path to an executable
> TimeRenderer_CMAKE_PATH:INTERNAL=C:/vtk40Src-1/VTK-bin/Rendering/Testing/Cxx
> //Is this VTK built with shared libraries.
> VTK_BUILD_SHARED_LIBS:INTERNAL=OFF
> //Advanced flag for variable: VTK_DEBUG_LEAKS
> VTK_DEBUG_LEAKS-ADVANCED:INTERNAL=1
> //Where VTK libraries are. Used by projects which depend on VTK.
> // Do not remove.
> VTK_LIBRARY_PATH:INTERNAL=C:/vtk40Src-1/VTK-bin/bin
> //Advanced flag for variable: VTK_MANGLE_MESA
> VTK_MANGLE_MESA-ADVANCED:INTERNAL=1
> //Advanced flag for variable: VTK_USE_64BIT_IDS
> VTK_USE_64BIT_IDS-ADVANCED:INTERNAL=1
> //Path to an executable
> expCos_CMAKE_PATH:INTERNAL=C:/vtk40Src-1/VTK-bin/Graphics/Testing/Cxx
> //Path to an executable
> otherArrays_CMAKE_PATH:INTERNAL=C:/vtk40Src-1/VTK-bin/Common/Testing/Cxx
> //Path to an executable
> otherByteSwap_CMAKE_PATH:INTERNAL=C:/vtk40Src-1/VTK-bin/Common/Testing/Cxx
> //Path to an executable
> otherCellArray_CMAKE_PATH:INTERNAL=C:/vtk40Src-1/VTK-bin/Common/Testing/Cxx
> //Path to an executable
> otherCellBoundaries_CMAKE_PATH:INTERNAL=C:/vtk40Src-1/VTK-bin/Common/Testing/Cxx
> //Path to an executable
> otherCellDerivatives_CMAKE_PATH:INTERNAL=C:/vtk40Src-1/VTK-bin/Common/Testing/Cxx
> //Path to an executable
> otherCellPosition_CMAKE_PATH:INTERNAL=C:/vtk40Src-1/VTK-bin/Common/Testing/Cxx
> //Path to an executable
> otherCellTypes_CMAKE_PATH:INTERNAL=C:/vtk40Src-1/VTK-bin/Common/Testing/Cxx
> //Path to an executable
> otherCoordinate_CMAKE_PATH:INTERNAL=C:/vtk40Src-1/VTK-bin/Rendering/Testing/Cxx
> //Path to an executable
> otherEmptyCell_CMAKE_PATH:INTERNAL=C:/vtk40Src-1/VTK-bin/Common/Testing/Cxx
> //Path to an executable
> otherLookupTable_CMAKE_PATH:INTERNAL=C:/vtk40Src-1/VTK-bin/Common/Testing/Cxx
> //Path to an executable
> otherRectilinearGrid_CMAKE_PATH:INTERNAL=C:/vtk40Src-1/VTK-bin/Common/Testing/Cxx
> //Path to an executable
> otherStructuredGrid_CMAKE_PATH:INTERNAL=C:/vtk40Src-1/VTK-bin/Common/Testing/Cxx
> //Path to an executable
> otherTimerLog_CMAKE_PATH:INTERNAL=C:/vtk40Src-1/VTK-bin/Common/Testing/Cxx
> //Path to an executable
> volProt_CMAKE_PATH:INTERNAL=C:/vtk40Src-1/VTK-bin/Graphics/Testing/Cxx
> //Path to a library
> vtkCommon_CMAKE_PATH:INTERNAL=C:/vtk40Src-1/VTK-bin/Common
> //Whether a library is static, shared or module.
> vtkCommon_LIBRARY_TYPE:INTERNAL=STATIC
> //Path to a library
> vtkFiltering_CMAKE_PATH:INTERNAL=C:/vtk40Src-1/VTK-bin/Filtering
> //Whether a library is static, shared or module.
> vtkFiltering_LIBRARY_TYPE:INTERNAL=STATIC
> //Path to a library
> vtkGraphics_CMAKE_PATH:INTERNAL=C:/vtk40Src-1/VTK-bin/Graphics
> //Whether a library is static, shared or module.
> vtkGraphics_LIBRARY_TYPE:INTERNAL=STATIC
> //Path to a library
> vtkHybrid_CMAKE_PATH:INTERNAL=C:/vtk40Src-1/VTK-bin/Hybrid
> //Whether a library is static, shared or module.
> vtkHybrid_LIBRARY_TYPE:INTERNAL=STATIC
> //Path to a library
> vtkIO_CMAKE_PATH:INTERNAL=C:/vtk40Src-1/VTK-bin/IO
> //Whether a library is static, shared or module.
> vtkIO_LIBRARY_TYPE:INTERNAL=STATIC
> //Path to a library
> vtkImaging_CMAKE_PATH:INTERNAL=C:/vtk40Src-1/VTK-bin/Imaging
> //Whether a library is static, shared or module.
> vtkImaging_LIBRARY_TYPE:INTERNAL=STATIC
> //Path to a library
> vtkRendering_CMAKE_PATH:INTERNAL=C:/vtk40Src-1/VTK-bin/Rendering
> //Whether a library is static, shared or module.
> vtkRendering_LIBRARY_TYPE:INTERNAL=STATIC
> //Path to a library
> vtkjpeg_CMAKE_PATH:INTERNAL=C:/vtk40Src-1/VTK-bin/Utilities/jpeg
> //Whether a library is static, shared or module.
> vtkjpeg_LIBRARY_TYPE:INTERNAL=STATIC
> //Path to a library
> vtkpng_CMAKE_PATH:INTERNAL=C:/vtk40Src-1/VTK-bin/Utilities/png
> //Whether a library is static, shared or module.
> vtkpng_LIBRARY_TYPE:INTERNAL=STATIC
> //Path to a library
> vtkzlib_CMAKE_PATH:INTERNAL=C:/vtk40Src-1/VTK-bin/Utilities/zlib
> //Whether a library is static, shared or module.
> vtkzlib_LIBRARY_TYPE:INTERNAL=STATIC
>