[Insight-users] Marker based registration

[Jenny Simpson]

I need to register a set of DICOM slices from a CT scan of bones.  The
problem with the data is that every third slice is jittered, i.e. the data
exhibits a pattern of offsets.  A straw full of liquid was scanned along
with the bones, so we have a marker that we can use for registration. I'm
new to registration though, and I was hoping someone could tell me what
algorithm/code inside or outside of Itk would be best to use to solve this
problem.

Thanks,

Jenny Simpson
Scientific Computing and Imaging Institute
University of Utah