AW: [Insight-users] No DICOM magic number found, but file appears
to be DICOM.
Luis Ibanez
luis . ibanez at kitware . com
Fri, 26 Sep 2003 16:44:22 -0400
Hi Thimmaiah,
Thanks for sending the DICOM files that are producing
read errors.
I put them in a single directory and they work fine
for reading. The slices can be read individually with
the ImageViewer application, and the three together
can be read as a volume using the DICOMImageSeriesReader.
It looks like you have in the same directory other
files that are not DICOM slices. The DICOMImageSeries
reader may be attempting to read *ALL* the files in
the directory and having trouble with the ones that
are not real DICOM slices.
Please verify that the directory *only* contains DICOM
files.
Thanks
Luis
---------------------------
Thimmaiah, Sandhya wrote:
> Hi Luis,
> I don't have any ftp to post but I am sending 3 zipped Dicom files. When I
> run itkDICOMImageSeriesTest with these files I get the following message.
> Hope you can help us out.Also I wanted to know how I can get the patients
> data(name, age.....). Thank you
>
> C:\ITK\BDICOMSeries\Release>itkDICOMImageSeriesTest.exe DICOM3 0
> No DICOM magic number found, but file appears to be DICOM.
> Proceeding without caution.
> No DICOM magic number found, but file appears to be DICOM.
> Proceeding without caution.
> No DICOM magic number found, but file appears to be DICOM.
> Proceeding without caution.
> DICOMSeriesFileNames (00224788)
> RTTI typeinfo: class itk::DICOMSeriesFileNames
> Reference Count: 2
> Modified Time: 4
> Debug: Off
> Observers:
> none
> Directory: DICOM3
> File name sorting order: SortByImagePositionPatient
> FileNames[0]: DICOM3/1.3.12.2.1107.5.2.4.7399.20030828092545000003026
> FileNames[1]: DICOM3/1.3.12.2.1107.5.2.4.7399.20030828092545000003025
> FileNames[2]: DICOM3/1.3.12.2.1107.5.2.4.7399.20030828092545000003024
>
> No DICOM magic number found, but file appears to be DICOM.
> Proceeding without caution.
> No DICOM magic number found, but file appears to be DICOM.
> Proceeding without caution.
> No DICOM magic number found, but file appears to be DICOM.
> Proceeding without caution.
> No DICOM magic number found, but file appears to be DICOM.
> Proceeding without caution.
> No DICOM magic number found, but file appears to be DICOM.
> Proceeding without caution.
> No DICOM magic number found, but file appears to be DICOM.
> Proceeding without caution.
> No DICOM magic number found, but file appears to be DICOM.
> Proceeding without caution.
> No DICOM magic number found, but file appears to be DICOM.
> Proceeding without caution.
> No DICOM magic number found, but file appears to be DICOM.
> Proceeding without caution.
> No DICOM magic number found, but file appears to be DICOM.
> Proceeding without caution.
> No DICOM magic number found, but file appears to be DICOM.
> Proceeding without caution.
> No DICOM magic number found, but file appears to be DICOM.
> Proceeding without caution.
> No DICOM magic number found, but file appears to be DICOM.
> Proceeding without caution.
> Image (002274B0)
> RTTI typeinfo: class itk::Image<unsigned short,3>
> Reference Count: 1
> Modified Time: 67
> Debug: Off
> Observers:
> none
> Source: (00225520)
> Source output index: 0
> Release Data: Off
> Data Released: False
> Global Release Data: Off
> PipelineMTime: 16
> UpdateTime: 155
> LastRequestedRegionWasOutsideOfTheBufferedRegion: 1
> LargestPossibleRegion:
> Dimension: 3
> Index: [0, 0, 0]
> Size: [256, 256, 3]
> BufferedRegion:
> Dimension: 3
> Index: [0, 0, 0]
> Size: [256, 256, 3]
> RequestedRegion:
> Dimension: 3
> Index: [0, 0, 0]
> Size: [256, 256, 3]
> Origin: [-135.445, -138.381, -2.3]
> Spacing: [1.07422, 1.07422, 2]
> PixelContainer: ImportImageContainer (002275A0)
> RTTI typeinfo: class itk::ImportImageContainer<unsigned long,unsigned
> short>
>
> Reference Count: 2
> Modified Time: 68
> Debug: Off
> Observers:
> none
> Pointer: 002275D0
> Container manages memory: true
> Size: 196608
> Capacity: 196608
>
> -----Original Message-----
> From: Luis Ibanez [mailto:luis . ibanez at kitware . com]
> Sent: Thursday, September 25, 2003 12:02 PM
> To: jiang
> Cc: Thimmaiah, Sandhya; ITK
> Subject: Re: AW: [Insight-users] Create 3D image data by a series of 2D
> dicom files
>
>
>
>
> Thimmaiah, Jiang,
>
> Could any one of you post somewhere one of the DICOM
> slices that is giving you trouble for reading ?
> (it could be in an FTP site or in a Web page...)
>
> That will give us a chance to try reading it and figure
> out what is special about these images.
>
> The DICOM implementation in ITK is not suppossed to be
> bullet proof, it is just covering a reasonable large
> set of DICOM files.
>
> Did anyone of you tried to read this files with MRIConvert ?
>
>
> Thanks
>
>
> Luis
>
>
>
> ------------------------
> jiang wrote:
>
>>Hi, Thimmaiah,
>>I also saw your message. It is a pity that I didn't yet solve this
>
> problem.
>
>>I am waiting for someone might answer your question. It is also helpful
>
> for
>
>>me.
>>
>>Good luch!
>>
>>
>>
>>-----Ursprüngliche Nachricht-----
>>Von: Thimmaiah, Sandhya [mailto:sthimmaiah at neurosurgery . wayne . edu]
>>Gesendet: Mittwoch, 24. September 2003 22:46
>>An: 'jiang'
>>Betreff: RE: [Insight-users] Create 3D image data by a series of 2D
>>dicom files
>>
>>
>>Hi Jiang,
>>I saw that you have got same messages as I am getting now....
>>No DICOM magic number found, but file appears to be DICOM.
>>Proceeding without caution.
>>I wanted to know if you were able to fix it. I would really appreciate if
>>you can reply me. Thank you
>>
>>-----Original Message-----
>>From: jiang [mailto:jiang at TI . Uni-Trier . DE]
>>Sent: Friday, September 19, 2003 12:19 PM
>>To: Lorensen, William E (Research)
>>Cc: ITK
>>Subject: AW: [Insight-users] Create 3D image data by a series of 2D
>>dicom files
>>
>>
>>Hi, Bill,
>>I tried your code to read the data that I sent you. However, it always
>>doesn't work. The message printed out are:
>>No DICOM magic number found, but file appears to be DICOM.
>>Proceeding without caution.
>>No DICOM magic number found, but file appears to be DICOM.
>>Proceeding without caution.
>>No DICOM magic number found, but file appears to be DICOM.
>>Proceeding without caution.
>>......
>>DICOMSeriesFileNames (010B2270)
>> RTTI typeinfo: class itk::DICOMSeriesFileNames
>> Reference Count: 2
>> Modified Time: 4
>> Debug: Off
>> Observers:
>> none
>> Directory: C:\jcy\Qt\TestApp\DICOMSeries\Series
>> File name sorting order: SortByImagePositionPatient
>> FileNames[0]:
>>C:\jcy\Qt\TestApp\DICOMSeries\Series/1.3.12.2.1107.5.2.1.5603.20
>>030731093845884002024
>> FileNames[1]:
>>C:\jcy\Qt\TestApp\DICOMSeries\Series/1.3.12.2.1107.5.2.1.5603.20
>>030731093845884002023
>> FileNames[2]:
>>C:\jcy\Qt\TestApp\DICOMSeries\Series/1.3.12.2.1107.5.2.1.5603.20
>>030731093845884002022
>>......
>>
>>Do you get the same messages when you run itkDICOMImageSeriesTest.cxx?
>>
>>
>>
>>Thank you for your help.
>>
>>
>>Chunyan
>>
>>_______________________________________________
>>Insight-users mailing list
>>Insight-users at itk . org
>>http://www . itk . org/mailman/listinfo/insight-users
>>
>>_______________________________________________
>>Insight-users mailing list
>>Insight-users at itk . org
>>http://www . itk . org/mailman/listinfo/insight-users
>>
>
>
>
>
>