[Insight-users] MICCAI Workshop on Open-Source Software

[Stephen R. Aylward]

2005 MICCAI Workshop on Open-Source Software
October 30th, 2005  -  Palm Springs, CA  USA

http://www.miccai2005.org

Hosted by
The Insight Software Consortium (ISC)
And
The National Alliance for Medical Image Computing (NA-MIC)


The Workshop on Open-Source Software is a one-day MICCAI event that 
features oral and poster presentations on open-source software and 
freely available data for medical image analysis research.
	This Workshop has used an open submission and review process, and 
therefore we expect this Workshop will be a extremely positive 
experience for the audience as well as the presenters.  The open-access 
Insight Journal was used to collect and publish submissions and reviews, 
http://www.insight-journal.org.  A total of 36 papers were submitted. 
These papers received 87 public reviews.  Many reviewers downloaded, 
installed, and tested the open-source software discussed in the papers, 
and their experiences played an important role in determining which 
papers were selected for presentation.  Many of these papers have also 
been downloaded by scores of other readers.  After much deliberation, 11 
papers were accepted for podium presentation and 10 papers were accepted 
for poster presentation.  This Workshop provides a forum for presenters, 
reviewers, and readers to further interact, and all in the audience will 
benefit.
	We encourage you to download the following papers from the Insight 
Journal’s website, and we look forward to your participation in the 
workshop.




Schedule of Podium Presentations


8:00		Welcome
			Stephen Aylward, Luis Ibanez, Tina Kapur

8:00 - 8:30 	The Insight Software Consortium and The Insight Software
Journal
			Luis Ibanez

8:30 - 9:30 	The National Alliance for Medical Image Computing
			Steve Piper

9:30 - 9:50 	Automated high-throughput registration for localizing 3D
mouse brain gene expression using ITK
			Lydia Ng

9:50 - 10:10	Creation and Demonstration of a Framework for Handling
Paths in ITK
			Galeotti, John

10:10 - 10:30	The NLM-Mayo Image Collection: Common Access to Uncommon Data
			Holmes, David R III

10:30 - 11:00	Break & Posters

11:00 - 11:20	A Quantitative DTI Fiber Tract Analysis Suite
			Goodlett, Casey

11:20 - 11:40	A DICOM-based Software Infrastructure for Data Archiving
			Dalal, Dhaval

11:40 - 12:00	Unsupervised Segmentation for Myofiber Counting in
Immunofluorescent Microscopy Images
			Urish, Kenneth

12:00 - 1:30 	Lunch

1:30 - 2:00 	Invited Talk
			
2:00 - 2:20	Development of open source software for computer-assisted
intervention systems
			Kazanzides, Peter

2:20 - 2:40	The MITK Approach
			Wolf, Ivo

2:40 - 3:00	IGSTK: A State Machine Architecture for an Open Source
Software Toolkit for Image-Guided Surgery Applications
			Ibanez, Luis

3:00 - 3:20	OpenTissue - An Open Source Toolkit for Physics-Based Animation
			Erleben, Kenny

3:20 - 3:40 	Open Topology: A Toolkit for Brain Isosurface Correction
			Jaume, Sylvain

3:40 – 4:00	Break & Posters

4:00 - 5:00	Posters



Poster Presentations

1)	Model-Image Registration of Parametric Shape Models
		Baker, Gavin

2)	Camino: Diffusion MRI reconstruction and processing
		Cook, Philip A

3)	Tetrahedral mesh generation for medical imaging
		Fedorov, Andriy

4)	Clustering Based Cardiac Resynchronization Therapy Prediction using
Open Source Toolkit PRTools
		Huang, Heng

5)	A Modification to Otsu Thresholding Method for ICV Segmentation
		Li, Andrew

6)	Comparison of Salient Point Detection Methods for 3D Medical Images
		Lloyd, Bryn A.

7)	Guided Diffusion Tensor Tractography with GTRACT: A Validation Study
		Magnotta, Vincent

8)	Segmentation of Skull-infiltrated Tumors Using ITK: Methods and
Validation
		Popovic, Aleksandra

9)	A Framework for Algorithm Evaluation and Clinical Application
Prototyping using ITK
		Rexilius, Jan

10)	User-Guided Level Set Segmentation of Anatomical Structures with
ITK-SNAP
		Yushkevich, Paul A.



Related links
http://www.insight-journal.org
http://www.InsightSoftwareConsortium.org
http://www.na-mic.org


-- 
===========================================================
Dr. Stephen R. Aylward
Associate Professor of Radiology
Adjunct Associate Professor of Computer Science and Surgery
http://caddlab.rad.unc.edu
aylward at unc.edu
(919) 966-9695