[Insight-users] Problemas con CellSegmentation...

Cesar Araujo cesar.araujo at oulu.fi
Fri Jul 13 07:19:39 EDT 2007



Hi,

I'm a newbie ITK user. I installed the ITK toolkit following the documentation. I have downloaded and installed also the InsightApplications. I could compile and run the HelloWorld example suggested in the documentation. However, when I try to compile the Applications for instance, CellularSegmentation it fails. I can run ccmake successfully after add and setup the FLTK_FLUID_EXECUTABLE to the proper value. However, when I run the "make" command it gives a lot of errors. Still I couldn't compile any of the application examples. I would appreciate any suggestion.

Thanks in advance,
César.-

-----------------------------------------------------------
Cesar Araujo, Lic. of Chemistry
Research Center for Molecular Endocrinology
P.O. Box 5000, FIN-90014 University of Oulu
Finland

phone: +358 8 3155632
e-mail: cesar.araujo at oulu.fi


PS: This is the list of errors that I've got:

In file included from /home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.cxx:4:
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.h:9:22: itkImage.h: No such file or directory
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.h:10:32: itkImageFileReader.h: No such file or directory
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.h:11:38: itkImageToVTKImageFilter.h: No such file or directory
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.h:12:44: itkRescaleIntensityImageFilter.h: No such file or directory
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.h:13:24: itkCommand.h: No such file or directory
In file included from /home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.cxx:4:
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.h:25: error: ISO
   C++ forbids declaration of `itk' with no type
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.h:25: error: parse
   error before `::' token
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.h:27: error: `
   int' is not an aggregate type
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.h:27: error: ISO
   C++ forbids declaration of `Image' with no type
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.h:27: error: template-id
   `Image<unsigned char, 2>' used as a declarator
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.h:27: error: parse
   error before `;' token
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.h:29: error: `
   ImageType' was not declared in this scope
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.h:29: error: `
   int' is not an aggregate type
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.h:29: error: ISO
   C++ forbids declaration of `ImageFileReader' with no type
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.h:29: error: template-id
   `ImageFileReader<<expression error> >' used as a declarator
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.h:29: error: parse
   error before `;' token
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.h:32: error: `
   ImageType' was not declared in this scope
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.h:33: error: `
   VisualizationImageType' was not declared in this scope
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.h:33: error: `
   int' is not an aggregate type
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.h:33: error: ISO
   C++ forbids declaration of `RescaleIntensityImageFilter' with no type
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.h:33: error: template-id
   `RescaleIntensityImageFilter<<expression error>, <expression error> >' used 
   as a declarator
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.h:33: error: parse
   error before `;' token
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.h:36: error: `
   VisualizationImageType' was not declared in this scope
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.h:36: error: `
   int' is not an aggregate type
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.h:36: error: ISO
   C++ forbids declaration of `ImageToVTKImageFilter' with no type
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.h:36: error: template-id
   `ImageToVTKImageFilter<<expression error> >' used as a declarator
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.h:36: error: parse
   error before `;' token
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.h:39: error: `
   int' is not an aggregate type
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.h:39: error: ISO
   C++ forbids declaration of `SimpleMemberCommand' with no type
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.h:39: error: template-id
   `SimpleMemberCommand<CellularSegmentationApplicationBase>' used as a 
   declarator
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.h:39: error: parse
   error before `;' token
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.h:57: error: syntax
   error before `::' token
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.h:59: error: syntax
   error before `::' token
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.h:61: error: syntax
   error before `::' token
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.h:63: error: syntax
   error before `::' token
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.cxx: In
   constructor `
   CellularSegmentationApplicationBase::CellularSegmentationApplicationBase()':
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.cxx:10: error: `
   m_ImageReader' undeclared (first use this function)
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.cxx:10: error: (Each
   undeclared identifier is reported only once for each function it appears 
   in.)
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.cxx:10: error: `
   ImageReaderType' undeclared (first use this function)
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.cxx:10: error: parse
   error before `::' token
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.cxx:12: error: `
   m_RescaleIntensity' undeclared (first use this function)
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.cxx:12: error: `
   RescaleIntensityFilterType' undeclared (first use this function)
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.cxx:12: error: parse
   error before `::' token
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.cxx:14: error: `
   m_ITK2VTKAdaptor' undeclared (first use this function)
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.cxx:14: error: `
   ITK2VTKAdaptorFilterType' undeclared (first use this function)
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.cxx:14: error: parse
   error before `::' token
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.cxx:16: error: `
   int' is not an aggregate type
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.cxx:16: error: parse
   error before `>' token
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.cxx:16: error: `::
   max' undeclared (first use here)
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.cxx:16: error: parse
   error before `)' token
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.cxx:17: error: `
   int' is not an aggregate type
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.cxx:17: error: parse
   error before `>' token
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.cxx:17: error: `::
   min' undeclared (first use here)
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.cxx:17: error: parse
   error before `)' token
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.cxx:19: error: `
   m_IterationObserver' undeclared (first use this function)
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.cxx:19: error: `
   IterationObserverType' undeclared (first use this function)
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.cxx:19: error: parse
   error before `::' token
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.cxx: In
   member function `virtual void 
   CellularSegmentationApplicationBase::IterationCallback()':
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.cxx:54: error: `
   cout' undeclared in namespace `std'
/home/caraujo/downloads/ITK/InsightApplications-3.2.0/CellularSegmentation/CellularSegmentationApplicationBase.cxx:54: error: `
   endl' undeclared in namespace `std'
make[2]: *** [CMakeFiles/CellularSegmentation.dir/CellularSegmentationApplicationBase.o] Error 1
make[1]: *** [CMakeFiles/CellularSegmentation.dir/all] Error 2
make: *** [all] Error 2 



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