[Insight-users] The Image Modality & ...

[Luis Ibanez]

Hi Amir,

Thanks for the additional information.

About your points:


3) If the STL file exported by SNAP doesn't work  then
    you may want to write it as a binary image and then
    use another STL generator.

    Maybe Solid works have another format (different from
    STL) from which it can read surfaces ?


4) We could help you with the paraview error if you are
    so kind to share the *EXACT* error message with us.


5) SNAP offers a limited set of the ITK level set filters.

    You should considering writing your own code, based on
    the Level sets examples that are available in

       Insight/Examples/Segmentation



    Regards,


        Luis


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amir wrote:
> Hello Dear Luis Ibanez:
> 
>  
> 
> 1- Yes, Dear, I use Snap for Segmenting & 3D Modelling the Knee. ( MRI 
> Images are Input files).
> 
>  
> 
> 2- The Image Charactristics: (a): Image Dimensions: (512, 512, 62). 
>  (b): Origion:
> 
>  
> 
> (0.351558,0.351562,2.00046),
> 
>  
> 
> (c): Protocol: Sag, T1,FSE. I don't know the modality and space exactly, 
> if you describe more I reply.
> 
>  
> 
> 3- I want to export my 3D model, as a .STL file, and Snap has this 
> command and ability, but I want to know
> 
>  
> 
> why this why this exported .STL file, is not read by  Solid works 2008, 
> is there any  difference between .STL
> 
>  
> 
> file & .STL file? I downloaded the Paraview 3.4.0-win32-x86, but when I 
> sellect it from program file, it sends
> 
>  
> 
> error, why?
> 
>  
> 
> 4- You saide the intensity values are not normalised, (not even across 
> the same image) then because I
> 
>  
> 
> don't know the methods like you saide, bias field correction method, 
> then can you introduce which method
> 
>  
> 
> I should use and its adress, please.
> 
>  
> 
> 5- You saide that I should use the detection method, or other level set 
> methods (like fast marching, shape
> 
>  
> 
> detection, & ....) but when I use the snake, I only have 2 options: 1- 
> Image Intensity . and 2) Edge Detection,
> 
>  
> 
> and I think, I don't  have any other option to sellect between fast 
> marching & ......, then Can you explain which
> 
>  
> 
> algorithm and How I can sellect this apropraite algorithm, Please.
> 
>  
> 
> Best Regards.
> 
>  
> 
> Amir hossein saveh.
> 
>  
>