[Insight-users] Re: Reading Deformation Field File into ITK ImageFileReader

[Emma Ryan]

Hello Vidya and Everyone else,

  Thank you for your reply. I apply the numerous deformation fields to one particular dataset. So I need to be able to write a separate program for reading the deformation file and applying to to any data set.

Is there a workaround ?

Emma


----- Original Message ----
From: "insight-users-request at itk.org" <insight-users-request at itk.org>
To: insight-users at itk.org
Sent: Thursday, February 21, 2008 11:00:24 AM
Subject: Insight-users Digest, Vol 46, Issue 41


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Today's 
Topics:

  
 
1. 
Reading 
Deformation 
Field 
File 
into    
ITK    
ImageFileReader
  
  
  
Filter 
(Emma 
Ryan) 
(Vidya 
Rajagopalan)
  
 
2. 
Re: 
Reading 
Deformation 
Field 
File    
into    
ITK    
ImageFileReader
  
  
  
Filter 
(Emma 
Ryan) 
(gabri)


----------------------------------------------------------------------

Message: 
1
Date: 
Thu, 
21 
Feb 
2008 
10:31:46 
-0500
From: 
Vidya 
Rajagopalan 
<vidyaraj at vt.edu>
Subject: 
[Insight-users] 
Reading 
Deformation 
Field 
File 
into    
ITK
    
ImageFileReader 
Filter 
(Emma 
Ryan)
To: 
insight-users at itk.org
Message-ID: 
<1203607906.47bd996257117 at webmail.vt.edu>
Content-Type: 
text/plain; 
charset=ISO-8859-1

Hello 
Emma,

I 
have 
had 
that 
problem 
with 
some 
of 
my 
images. 
I 
set 
up 
the 
whole 
program
to 
do 
registration 
and 
apply 
the 
deformation 
(co-register) 
to 
images 
with 
th
deformation 
field 
still 
in 
the 
memory. 
This 
way 
you 
avoid 
the 
IO 
issues 
with 
the
deformation 
field.

Also, 
I 
have 
this 
problem 
with 
only 
some 
of 
the 
deformation 
fields. 
Some 
others
seem
to 
work 
fine.

Vidya


------------------------------

Message: 
2
Date: 
Thu, 
21 
Feb 
2008 
16:40:19 
+0100
From: 
gabri 
<tartuz at gmail.com>
Subject: 
Re: 
[Insight-users] 
Reading 
Deformation 
Field 
File    
into    
ITK
    
ImageFileReader 
Filter 
(Emma 
Ryan)
To: 
Vidya 
Rajagopalan 
<vidyaraj at vt.edu>
Cc: 
insight-users at itk.org
Message-ID: 
<47BD9B63.4090502 at gmail.com>
Content-Type: 
text/plain; 
charset="iso-8859-1"

Vidya 
Rajagopalan 
ha 
scritto:
> 
Hello 
Emma,
>
> 
I 
have 
had 
that 
problem 
with 
some 
of 
my 
images. 
I 
set 
up 
the 
whole 
program
> 
to 
do 
registration 
and 
apply 
the 
deformation 
(co-register) 
to 
images 
with 
th
> 
deformation 
field 
still 
in 
the 
memory. 
This 
way 
you 
avoid 
the 
IO 
issues 
with 
the
> 
deformation 
field.
>
> 
Also, 
I 
have 
this 
problem 
with 
only 
some 
of 
the 
deformation 
fields. 
Some 
others
> 
seem
> 
to 
work 
fine.
>
> 
Vidya
> 
_______________________________________________
> 
Insight-users 
mailing 
list
> 
Insight-users at itk.org
> 
http://www.itk.org/mailman/listinfo/insight-users
>
>  
 
Hi,
to 
visualize 
the 
deformation 
field 
try 
to 
use 
Paraview 
, 
look 
in 
the 
itk 
software 
Guide 
to 
find 
more 
details.

Best 
reguards,
Gabriele

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End 
of 
Insight-users 
Digest, 
Vol 
46, 
Issue 
41
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