[Insight-users] Errors compiling ITK 3.4.0 with system GDCM

[Wagner Sales]

Hi all,

That's are more a report than a question. I downloaded the GDCM 1.3.2,
compiled and installed. After that, I tried to compile ITK turning on the
ITK_USE_SYSTEM_GDCM, just to not have two versions of GDCM installed on my
machine.
The following errors are showed:

/home/wsales/head/InsightToolkit-3.4.0/Code/IO/itkGDCMImageIO.cxx:33:45:
error: gdcmValEntry.h: No such file or directory
/home/wsales/head/InsightToolkit-3.4.0/Code/IO/itkGDCMImageIO.cxx:34:45:
error: gdcmBinEntry.h: No such file or directory
/usr/include/gdcm/gdcmFile.h: In destructor 'virtual
itk::GDCMImageIO::~GDCMImageIO()':
/usr/include/gdcm/gdcmFile.h:193: error: 'virtual gdcm::File::~File()' is
protected
/home/wsales/head/InsightToolkit-3.4.0/Code/IO/itkGDCMImageIO.cxx:146:
error: within this context
/home/wsales/head/InsightToolkit-3.4.0/Code/IO/itkGDCMImageIO.cxx: In member
function 'virtual bool itk::GDCMImageIO::CanReadFile(const char*)':
/home/wsales/head/InsightToolkit-3.4.0/Code/IO/itkGDCMImageIO.cxx:247:
error: 'CanReadFile' is not a member of 'gdcm::Document'
/usr/include/gdcm/gdcmFileHelper.h: In member function 'virtual void
itk::GDCMImageIO::Read(void*)':
/usr/include/gdcm/gdcmFileHelper.h:187: error:
'gdcm::FileHelper::FileHelper(gdcm::File*)' is protected
/home/wsales/head/InsightToolkit-3.4.0/Code/IO/itkGDCMImageIO.cxx:433:
error: within this context
/usr/include/gdcm/gdcmFileHelper.h:188: error: 'virtual
gdcm::FileHelper::~FileHelper()' is protected
/home/wsales/head/InsightToolkit-3.4.0/Code/IO/itkGDCMImageIO.cxx:433:
error: within this context
/usr/include/gdcm/gdcmFile.h: In member function 'void
itk::GDCMImageIO::InternalReadImageInformation(std::ifstream&)':
/usr/include/gdcm/gdcmFile.h:192: error: 'gdcm::File::File()' is protected
/home/wsales/head/InsightToolkit-3.4.0/Code/IO/itkGDCMImageIO.cxx:514:
error: within this context
/usr/include/gdcm/gdcmFile.h:193: error: 'virtual gdcm::File::~File()' is
protected
/home/wsales/head/InsightToolkit-3.4.0/Code/IO/itkGDCMImageIO.cxx:515:
error: within this context
/home/wsales/head/InsightToolkit-3.4.0/Code/IO/itkGDCMImageIO.cxx:679:
error: 'BinEntry' is not a member of 'gdcm'
/home/wsales/head/InsightToolkit-3.4.0/Code/IO/itkGDCMImageIO.cxx:679:
error: 'b' was not declared in this scope
/home/wsales/head/InsightToolkit-3.4.0/Code/IO/itkGDCMImageIO.cxx:679:
error: expected type-specifier
/home/wsales/head/InsightToolkit-3.4.0/Code/IO/itkGDCMImageIO.cxx:679:
error: expected `>'
/home/wsales/head/InsightToolkit-3.4.0/Code/IO/itkGDCMImageIO.cxx:679:
error: expected `('
/home/wsales/head/InsightToolkit-3.4.0/Code/IO/itkGDCMImageIO.cxx:679:
error: 'BinEntry' is not a member of 'gdcm'
/home/wsales/head/InsightToolkit-3.4.0/Code/IO/itkGDCMImageIO.cxx:679:
error: expected primary-expression before '>' token
/home/wsales/head/InsightToolkit-3.4.0/Code/IO/itkGDCMImageIO.cxx:680:
error: expected `)' before '{' token
/usr/include/gdcm/gdcmFile.h: In member function 'virtual void
itk::GDCMImageIO::Write(const void*)':
/usr/include/gdcm/gdcmFile.h:192: error: 'gdcm::File::File()' is protected
/home/wsales/head/InsightToolkit-3.4.0/Code/IO/itkGDCMImageIO.cxx:800:
error: within this context
/usr/include/gdcm/gdcmFileHelper.h:187: error:
'gdcm::FileHelper::FileHelper(gdcm::File*)' is protected
/home/wsales/head/InsightToolkit-3.4.0/Code/IO/itkGDCMImageIO.cxx:801:
error: within this context
/home/wsales/head/InsightToolkit-3.4.0/Code/IO/itkGDCMImageIO.cxx:826:
error: no matching function for call to 'gdcm::Dict::GetEntry(const
std::basic_string<char, std::char_traits<char>, std::allocator<char> >&)'
/usr/include/gdcm/gdcmDict.h:70: note: candidates are: gdcm::DictEntry*
gdcm::Dict::GetEntry(uint16_t, uint16_t)
/usr/include/gdcm/gdcmDict.h:71: note:                 gdcm::DictEntry*
gdcm::Dict::GetEntry(const gdcm::TagKey&)
/home/wsales/head/InsightToolkit-3.4.0/Code/IO/itkGDCMImageIO.cxx:839:
error: 'class gdcm::File' has no member named 'InsertValEntry'
/home/wsales/head/InsightToolkit-3.4.0/Code/IO/itkGDCMImageIO.cxx:855:
error: 'class gdcm::File' has no member named 'InsertBinEntry'
/home/wsales/head/InsightToolkit-3.4.0/Code/IO/itkGDCMImageIO.cxx:906:
error: 'class gdcm::File' has no member named 'InsertValEntry'
/home/wsales/head/InsightToolkit-3.4.0/Code/IO/itkGDCMImageIO.cxx:910:
error: 'class gdcm::File' has no member named 'InsertValEntry'
/home/wsales/head/InsightToolkit-3.4.0/Code/IO/itkGDCMImageIO.cxx:917:
error: 'class gdcm::File' has no member named 'InsertValEntry'
/home/wsales/head/InsightToolkit-3.4.0/Code/IO/itkGDCMImageIO.cxx:924:
error: 'class gdcm::File' has no member named 'InsertValEntry'
/home/wsales/head/InsightToolkit-3.4.0/Code/IO/itkGDCMImageIO.cxx:932:
error: 'class gdcm::File' has no member named 'InsertValEntry'
/home/wsales/head/InsightToolkit-3.4.0/Code/IO/itkGDCMImageIO.cxx:948:
error: 'class gdcm::File' has no member named 'InsertValEntry'
/home/wsales/head/InsightToolkit-3.4.0/Code/IO/itkGDCMImageIO.cxx:958:
error: 'class gdcm::File' has no member named 'InsertValEntry'
/home/wsales/head/InsightToolkit-3.4.0/Code/IO/itkGDCMImageIO.cxx:1036:
error: 'class gdcm::File' has no member named 'InsertValEntry'
/home/wsales/head/InsightToolkit-3.4.0/Code/IO/itkGDCMImageIO.cxx:1037:
error: 'class gdcm::File' has no member named 'InsertValEntry'
/home/wsales/head/InsightToolkit-3.4.0/Code/IO/itkGDCMImageIO.cxx:1038:
error: 'class gdcm::File' has no member named 'InsertValEntry'
/home/wsales/head/InsightToolkit-3.4.0/Code/IO/itkGDCMImageIO.cxx:1039:
error: 'class gdcm::File' has no member named 'InsertValEntry'
/home/wsales/head/InsightToolkit-3.4.0/Code/IO/itkGDCMImageIO.cxx:1043:
error: 'class gdcm::File' has no member named 'InsertValEntry'
/home/wsales/head/InsightToolkit-3.4.0/Code/IO/itkGDCMImageIO.cxx:1059:
error: 'class gdcm::File' has no member named 'InsertValEntry'
/home/wsales/head/InsightToolkit-3.4.0/Code/IO/itkGDCMImageIO.cxx:1060:
error: 'class gdcm::File' has no member named 'InsertValEntry'
/home/wsales/head/InsightToolkit-3.4.0/Code/IO/itkGDCMImageIO.cxx:1061:
error: 'class gdcm::File' has no member named 'InsertValEntry'
/home/wsales/head/InsightToolkit-3.4.0/Code/IO/itkGDCMImageIO.cxx:1062:
error: 'class gdcm::File' has no member named 'InsertValEntry'
/home/wsales/head/InsightToolkit-3.4.0/Code/IO/itkGDCMImageIO.cxx:1063:
error: 'class gdcm::File' has no member named 'InsertValEntry'
/home/wsales/head/InsightToolkit-3.4.0/Code/IO/itkGDCMImageIO.cxx:1065:
error: 'class gdcm::File' has no member named 'InsertValEntry'
/usr/include/gdcm/gdcmFileHelper.h:188: error: 'virtual
gdcm::FileHelper::~FileHelper()' is protected
/home/wsales/head/InsightToolkit-3.4.0/Code/IO/itkGDCMImageIO.cxx:1100:
error: within this context
/usr/include/gdcm/gdcmFile.h:193: error: 'virtual gdcm::File::~File()' is
protected
/home/wsales/head/InsightToolkit-3.4.0/Code/IO/itkGDCMImageIO.cxx:1101:
error: within this context
/home/wsales/head/InsightToolkit-3.4.0/Code/IO/itkGDCMImageIO.cxx: In static
member function 'static bool itk::GDCMImageIO::GetLabelFromTag(const
std::string&, std::string&)':
/home/wsales/head/InsightToolkit-3.4.0/Code/IO/itkGDCMImageIO.cxx:1229:
error: no matching function for call to 'gdcm::Dict::GetEntry(const
std::basic_string<char, std::char_traits<char>, std::allocator<char> >&)'
/usr/include/gdcm/gdcmDict.h:70: note: candidates are: gdcm::DictEntry*
gdcm::Dict::GetEntry(uint16_t, uint16_t)
/usr/include/gdcm/gdcmDict.h:71: note:                 gdcm::DictEntry*
gdcm::Dict::GetEntry(const gdcm::TagKey&)
make[2]: *** [Code/IO/CMakeFiles/ITKIO.dir/itkGDCMImageIO.o] Error 1
make[1]: *** [Code/IO/CMakeFiles/ITKIO.dir/all] Error 2
make: *** [all] Error 2

The expected file gdcmValEntry.h aren't delivered with current version of
GDCM.

Regards,

Wagner Sales
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