[Insight-users] IA64 compilation Fails at vxl
Mike Jackson
mike.jackson at bluequartz.net
Sun Aug 16 17:07:48 EDT 2009
I did basically what the patch did except I used &&
(defined(__INTEL_COMPILER)) before I got your message.
Compiled it with ICC version 9.1.049. Seems to have compiled OK.
Thanks for the heads up.
_________________________________________________________
Mike Jackson mike.jackson at bluequartz.net
BlueQuartz Software www.bluequartz.net
Principal Software Engineer Dayton, Ohio
On Sun, Aug 16, 2009 at 1:26 PM, Tom
Vercauteren<tom.vercauteren at gmail.com> wrote:
> Hi Mike,
>
> There was a logic flaw in the ifdefs of vnl_math.h that would
> prevent ITK from building on non x86 and non ppc platforms. This
> problem should have been fixed (after the 3.14 release) with the
> following patch:
> http://www.itk.org/cgi-bin/viewcvs.cgi/Utilities/vxl/core/vnl/vnl_math.h?root=Insight&r1=1.13&r2=1.11&sortby=date
>
> You could try to back-port this patch on the 3.14 branch.
>
> Hope this helps,
> Tom
>
> On Sun, Aug 16, 2009 at 17:39, Luis Ibanez<luis.ibanez at kitware.com> wrote:
>> Hi Mike,
>>
>> Thanks for the clarification.
>>
>> What version of GCC do you have in this SGI ?
>> Have you verified the settings of the environment variables CC and CXX ?
>> We have several Nightly builds with the ICC compiler, you may want to
>> check the ITK Dashboard, to see what versions of ICC are known to work
>> with ITK.
>>
>> Regards,
>>
>>
>> Luis
>>
>>
>> -----------------------------------------------------------------------------
>>
>> On Sun, Aug 16, 2009 at 9:44 AM, Mike Jackson <mike.jackson at bluequartz.net>
>> wrote:
>>>
>>> My compiler _is_ GCC. The system may be an SGI but it is running SUSE
>>> Linux. I think they have ICC installed on the system so I might be
>>> able to try that. Don't usually have good luck with ICC and ITK
>>> though.
>>> _________________________________________________________
>>> Mike Jackson mike.jackson at bluequartz.net
>>>
>>> On Sat, Aug 15, 2009 at 10:21 PM, Luis Ibanez<luis.ibanez at kitware.com>
>>> wrote:
>>> >
>>> > Hi Mike,
>>> >
>>> > It would seem that the VXL code is assuming that your compiler is
>>> > GCC and it trying to compile the Rounding section of code that
>>> > corresponds to the option:
>>> >
>>> >
>>> > #elif GCC_USE_FAST_IMPL // Fast gcc asm implementation
>>> >
>>> > inline int vnl_math_rnd_halfinttoeven(float x)
>>> > {
>>> > # ifdef VNL_CHECK_FPU_ROUNDING_MODE
>>> > assert(fegetround()==FE_TONEAREST);
>>> > # endif
>>> > int r;
>>> > __asm__ __volatile__ ("fistpl %0" : "=m"(r) : "t"(x) : "st");
>>> > return r;
>>> > }
>>> > inline int vnl_math_rnd_halfinttoeven(double x)
>>> > {
>>> > # ifdef VNL_CHECK_FPU_ROUNDING_MODE
>>> > assert(fegetround()==FE_TONEAREST);
>>> > # endif
>>> > int r;
>>> > __asm__ __volatile__ ("fistpl %0" : "=m"(r) : "t"(x) : "st");
>>> > return r;
>>> > }
>>> >
>>> > #elif VC_USE_FAST_IMPL
>>> >
>>> >
>>> >
>>> > Did you set your CC and CXX environment variables
>>> > before running CMake ?
>>> >
>>> >
>>> > Are you sure that they are pointing to the SGI compiler ?
>>> > and to to GCC ?
>>> >
>>> >
>>> > Luis
>>> >
>>> >
>>> > ----------------------------------------------------------------
>>> > On Sat, Aug 15, 2009 at 3:53 PM, Mike Jackson
>>> > <mike.jackson at bluequartz.net>
>>> > wrote:
>>> >>
>>> >> I am trying to compile ITK 3.14.0 on an IA64 platform (SGI Altix
>>> >> 3500). I get the following error:
>>> >>
>>> >> [ 86%] Building CXX object
>>> >> Code/Numerics/CMakeFiles/ITKNumerics.dir/itkSPSAOptimizer.o
>>> >> cd /work1/jacksonm/InsightToolkit-3.14.0/Build/Code/Numerics &&
>>> >> /usr/bin/c++ -ftemplate-depth-50 -Wall -Wno-deprecated -O3 -DNDEBUG
>>> >> -I/work1/jacksonm/InsightToolkit-3.14.0/Build
>>> >> -I/work1/jacksonm/InsightToolkit-3.14.0/Code/Algorithms
>>> >> -I/work1/jacksonm/InsightToolkit-3.14.0/Code/BasicFilters
>>> >> -I/work1/jacksonm/InsightToolkit-3.14.0/Code/Common
>>> >> -I/work1/jacksonm/InsightToolkit-3.14.0/Code/Numerics
>>> >> -I/work1/jacksonm/InsightToolkit-3.14.0/Code/IO
>>> >> -I/work1/jacksonm/InsightToolkit-3.14.0/Code/Numerics/FEM
>>> >> -I/work1/jacksonm/InsightToolkit-3.14.0/Code/Numerics/NeuralNetworks
>>> >> -I/work1/jacksonm/InsightToolkit-3.14.0/Code/SpatialObject
>>> >> -I/work1/jacksonm/InsightToolkit-3.14.0/Utilities/MetaIO
>>> >> -I/work1/jacksonm/InsightToolkit-3.14.0/Utilities/NrrdIO
>>> >> -I/work1/jacksonm/InsightToolkit-3.14.0/Build/Utilities/NrrdIO
>>> >> -I/work1/jacksonm/InsightToolkit-3.14.0/Utilities/DICOMParser
>>> >> -I/work1/jacksonm/InsightToolkit-3.14.0/Build/Utilities/DICOMParser
>>> >> -I/work1/jacksonm/InsightToolkit-3.14.0/Build/Utilities/expat
>>> >> -I/work1/jacksonm/InsightToolkit-3.14.0/Utilities/expat
>>> >> -I/work1/jacksonm/InsightToolkit-3.14.0/Utilities/nifti/niftilib
>>> >> -I/work1/jacksonm/InsightToolkit-3.14.0/Utilities/nifti/znzlib
>>> >> -I/work1/jacksonm/InsightToolkit-3.14.0/Utilities/itkExtHdrs
>>> >> -I/work1/jacksonm/InsightToolkit-3.14.0/Build/Utilities
>>> >> -I/work1/jacksonm/InsightToolkit-3.14.0/Utilities
>>> >> -I/work1/jacksonm/InsightToolkit-3.14.0/Code/Numerics/Statistics
>>> >> -I/work1/jacksonm/InsightToolkit-3.14.0/Utilities/vxl/v3p/netlib
>>> >> -I/work1/jacksonm/InsightToolkit-3.14.0/Utilities/vxl/vcl
>>> >> -I/work1/jacksonm/InsightToolkit-3.14.0/Utilities/vxl/core
>>> >> -I/work1/jacksonm/InsightToolkit-3.14.0/Build/Utilities/vxl/v3p/netlib
>>> >> -I/work1/jacksonm/InsightToolkit-3.14.0/Build/Utilities/vxl/vcl
>>> >> -I/work1/jacksonm/InsightToolkit-3.14.0/Build/Utilities/vxl/core
>>> >> -I/work1/jacksonm/InsightToolkit-3.14.0/Build/Utilities/gdcm
>>> >> -I/work1/jacksonm/InsightToolkit-3.14.0/Utilities/gdcm/src
>>> >> -I/work1/jacksonm/InsightToolkit-3.14.0/Code/Review -o
>>> >> CMakeFiles/ITKNumerics.dir/itkSPSAOptimizer.o -c
>>> >>
>>> >> /work1/jacksonm/InsightToolkit-3.14.0/Code/Numerics/itkSPSAOptimizer.cxx
>>> >>
>>> >> /work1/jacksonm/InsightToolkit-3.14.0/Utilities/vxl/core/vnl/vnl_math.h:
>>> >> In member function ‘virtual void
>>> >> itk::SPSAOptimizer::GenerateDelta(unsigned int)’:
>>> >>
>>> >>
>>> >> /work1/jacksonm/InsightToolkit-3.14.0/Utilities/vxl/core/vnl/vnl_math.h:220:
>>> >> error: unknown register name ‘st’ in ‘asm’
>>> >> make[2]: ***
>>> >> [Code/Numerics/CMakeFiles/ITKNumerics.dir/itkSPSAOptimizer.o]
>>> >> Error 1
>>> >> make[2]: Leaving directory
>>> >> `/work1/jacksonm/InsightToolkit-3.14.0/Build'
>>> >> make[1]: *** [Code/Numerics/CMakeFiles/ITKNumerics.dir/all] Error 2
>>> >> make[1]: Leaving directory
>>> >> `/work1/jacksonm/InsightToolkit-3.14.0/Build'
>>> >> make: *** [all] Error 2
>>> >>
>>> >> Linux XXXX-0 2.6.16.54-0.2.12-default #1 SMP Fri Oct 24 02:16:38 UTC
>>> >> 2008 ia64 ia64 ia64 GNU/Linux
>>> >>
>>> >> Here is from the CpuInfo:
>>> >>
>>> >> processor : 0
>>> >> vendor : GenuineIntel
>>> >> arch : IA-64
>>> >> family : Itanium 2
>>> >> model : 2
>>> >> revision : 1
>>> >> archrev : 0
>>> >> features : branchlong
>>> >> cpu number : 0
>>> >> cpu regs : 4
>>> >> cpu MHz : 1600.000000
>>> >> itc MHz : 1600.000000
>>> >> BogoMIPS : 2392.06
>>> >> siblings : 1
>>> >>
>>> >> Thanks
>>> >> _________________________________________________________
>>> >> Mike Jackson mike.jackson at bluequartz.net
>>> >> BlueQuartz Software www.bluequartz.net
>>> >> Principal Software Engineer Dayton, Ohio
>>> >> _____________________________________
>>> >> Powered by www.kitware.com
>>> >>
>>> >> Visit other Kitware open-source projects at
>>> >> http://www.kitware.com/opensource/opensource.html
>>> >>
>>> >> Please keep messages on-topic and check the ITK FAQ at:
>>> >> http://www.itk.org/Wiki/ITK_FAQ
>>> >>
>>> >> Follow this link to subscribe/unsubscribe:
>>> >> http://www.itk.org/mailman/listinfo/insight-users
>>> >
>>> >
>>
>>
>> _____________________________________
>> Powered by www.kitware.com
>>
>> Visit other Kitware open-source projects at
>> http://www.kitware.com/opensource/opensource.html
>>
>> Please keep messages on-topic and check the ITK FAQ at:
>> http://www.itk.org/Wiki/ITK_FAQ
>>
>> Follow this link to subscribe/unsubscribe:
>> http://www.itk.org/mailman/listinfo/insight-users
>>
>>
>
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