[Insight-users] Doxygen Documentation is Difficult to Read - DoxygenStyle.css file needs to be changed

Bill Lorensen bill.lorensen at gmail.com
Wed Jul 29 12:43:36 EDT 2009


I see now. The duplicates are for classes that exist in Review and
also in other directories.

The class TransformFileReader is defined in both
IO/itkTransformFileReader.h and
Review/itkTransformFileReaderWithFactory.h.

Similar duplicates are present for several Metrics that have duplicate
definitions in Review.

I think we just live with it.

Bill

On Wed, Jul 29, 2009 at 10:37 AM, Luis Ibanez<luis.ibanez at kitware.com> wrote:
>
> Bill,
>
> Good catch...
>
> This duplication of entries, however, doesn't seem to originate from
> the .css file (which only affects formatting).
>
> The duplication was already present in the documentation of 3.12:
> http://www.itk.org/Doxygen312/html/hierarchy.html
> (that still uses the previous .css file).
>
>
> We must be doing something wrong in that class header.
>
> One observation is that it doesn't have a \brief comment...
>
>
> Any ideas ?
>
>
>      Thanks
>
>
>            Luis
>
>
>
> ....
>
>
> On Tue, Jul 28, 2009 at 10:44 PM, Bill Lorensen <bill.lorensen at gmail.com>
> wrote:
>>
>> Luis,
>>
>> I also see duplicates of many classes in the hierarchy list:
>>
>> http://www.itk.org/Doxygen314/html/hierarchy.html
>>
>> for example itk::TransformFileReader and itk::TransformFileWriter
>>
>> Bill
>>
>> On Tue, Jul 28, 2009 at 10:29 PM, Luis Ibanez<luis.ibanez at kitware.com>
>> wrote:
>> >
>> > Hi Michael,
>> >
>> > I have replaced the the DoxygenStyle.css file with
>> > the one that you kindly provided.
>> >
>> > However,
>> > it doesn't quite look as the one you posted...
>> >
>> > Could you please take a look at
>> > http://www.itk.org/Doxygen314/html/index.html
>> >
>> >
>> > and confirm if this is the expected formatting ?
>> >
>> >
>> >      Thanks
>> >
>> >
>> >              Luis
>> >
>> >
>> > ----------------------------------------------------
>> > On Tue, Jul 28, 2009 at 9:04 AM, Michael Jackson
>> > <mike.jackson at bluequartz.net> wrote:
>> >>
>> >> Thanks Luis, Appreciate the help.
>> >> ---
>> >> Mike Jackson                 www.bluequartz.net
>> >>
>> >>
>> >>
>> >> On Jul 28, 2009, at 8:30 AM, Luis Ibanez wrote:
>> >>
>> >>> Michael, Gaetan,
>> >>>
>> >>> Thanks a lot for looking at this improvement.
>> >>>
>> >>> I'll give it a shot (later today) at replacing the .css file.
>> >>>
>> >>>
>> >>>     Luis
>> >>>
>> >>>
>> >>>
>> >>> --------------------------------------------------------
>> >>> On Wed, Jul 22, 2009 at 12:20 PM, Michael Jackson
>> >>> <mike.jackson at bluequartz.net> wrote:
>> >>>
>> >>> On Jul 22, 2009, at 12:13 PM, Gaëtan Lehmann wrote:
>> >>>
>> >>>
>> >>> Le 22 juil. 09 à 17:29, Michael Jackson a écrit :
>> >>>
>> >>> Over the last day I have had to dive deep into the ITK Doxygen
>> >>> documentation and I have found it extremely difficult to read simply
>> >>> due to
>> >>> the formatting that has been applied. As I use Doxygen in some of my
>> >>> other
>> >>> projects I and that documentation is formatted in a reasonable manner
>> >>> I
>> >>> figured I would take a minute and figure out what the problem might
>> >>> be.
>> >>> Turns out the CSS style sheet that Doxygen generates for my projects
>> >>> is
>> >>> vastly different from that produced for the ITK project. I am
>> >>> attaching 2
>> >>> images that show the difference. Looks like the default CSS sheet is
>> >>> configured from ITK_ROOT/Documentation/Doxygen/DoxygenStyle.css. Can
>> >>> this be
>> >>> changed please? Do I need to file a feature request?
>> >>>
>> >>>
>> >>> That's a *huge* improvement!
>> >>> Can you provide a patch?
>> >>>
>> >>> Gaëtan
>> >>>
>> >>>
>> >>> --
>> >>> Gaëtan Lehmann
>> >>> Biologie du Développement et de la Reproduction
>> >>> INRA de Jouy-en-Josas (France)
>> >>> tel: +33 1 34 65 29 66    fax: 01 34 65 29 09
>> >>> http://voxel.jouy.inra.fr  http://www.itk.org
>> >>> http://www.mandriva.org  http://www.bepo.fr
>> >>>
>> >>>
>> >>> Replace the contents of
>> >>> "ITK_ROOT/Documentation/Doxygen/DoxygenStyle.css"
>> >>> with the following:
>> >>>
>> >>>
>> >>> BODY,H1,H2,H3,H4,H5,H6,P,CENTER,TD,TH,UL,DL,DIV {
>> >>>       font-family: Geneva, Arial, Helvetica, sans-serif;
>> >>> }
>> >>> BODY,TD {
>> >>>      font-size: 90%;
>> >>> }
>> >>> H1 {
>> >>>       text-align: center;
>> >>>      font-size: 160%;
>> >>> }
>> >>> H2 {
>> >>>      font-size: 120%;
>> >>> }
>> >>> H3 {
>> >>>      font-size: 100%;
>> >>> }
>> >>> CAPTION { font-weight: bold }
>> >>> DIV.qindex {
>> >>>       width: 100%;
>> >>>       background-color: #e8eef2;
>> >>>       border: 1px solid #84b0c7;
>> >>>       text-align: center;
>> >>>       margin: 2px;
>> >>>       padding: 2px;
>> >>>       line-height: 140%;
>> >>> }
>> >>> DIV.nav {
>> >>>       width: 100%;
>> >>>       background-color: #e8eef2;
>> >>>       border: 1px solid #84b0c7;
>> >>>       text-align: center;
>> >>>       margin: 2px;
>> >>>       padding: 2px;
>> >>>       line-height: 140%;
>> >>> }
>> >>> DIV.navtab {
>> >>>      background-color: #e8eef2;
>> >>>      border: 1px solid #84b0c7;
>> >>>      text-align: center;
>> >>>      margin: 2px;
>> >>>      margin-right: 15px;
>> >>>      padding: 2px;
>> >>> }
>> >>> TD.navtab {
>> >>>      font-size: 70%;
>> >>> }
>> >>> A.qindex {
>> >>>      text-decoration: none;
>> >>>      font-weight: bold;
>> >>>      color: #1A419D;
>> >>> }
>> >>> A.qindex:visited {
>> >>>      text-decoration: none;
>> >>>      font-weight: bold;
>> >>>      color: #1A419D
>> >>> }
>> >>> A.qindex:hover {
>> >>>       text-decoration: none;
>> >>>       background-color: #ddddff;
>> >>> }
>> >>> A.qindexHL {
>> >>>       text-decoration: none;
>> >>>       font-weight: bold;
>> >>>       background-color: #6666cc;
>> >>>       color: #ffffff;
>> >>>       border: 1px double #9295C2;
>> >>> }
>> >>> A.qindexHL:hover {
>> >>>       text-decoration: none;
>> >>>       background-color: #6666cc;
>> >>>       color: #ffffff;
>> >>> }
>> >>> A.qindexHL:visited { text-decoration: none; background-color: #6666cc;
>> >>> color: #ffffff }
>> >>> A.el { text-decoration: none; font-weight: bold }
>> >>> A.elRef { font-weight: bold }
>> >>> A.code:link { text-decoration: none; font-weight: normal; color:
>> >>> #0000FF}
>> >>> A.code:visited { text-decoration: none; font-weight: normal; color:
>> >>> #0000FF}
>> >>> A.codeRef:link { font-weight: normal; color: #0000FF}
>> >>> A.codeRef:visited { font-weight: normal; color: #0000FF}
>> >>> A:hover { text-decoration: none; background-color: #f2f2ff }
>> >>> DL.el { margin-left: -1cm }
>> >>> .fragment {
>> >>>      font-family: monospace, fixed;
>> >>>      font-size: 95%;
>> >>> }
>> >>> PRE.fragment {
>> >>>       border: 1px solid #CCCCCC;
>> >>>       background-color: #f5f5f5;
>> >>>       margin-top: 4px;
>> >>>       margin-bottom: 4px;
>> >>>       margin-left: 2px;
>> >>>       margin-right: 8px;
>> >>>       padding-left: 6px;
>> >>>       padding-right: 6px;
>> >>>       padding-top: 4px;
>> >>>       padding-bottom: 4px;
>> >>> }
>> >>> DIV.ah { background-color: black; font-weight: bold; color: #ffffff;
>> >>> margin-bottom: 3px; margin-top: 3px }
>> >>>
>> >>> DIV.groupHeader {
>> >>>      margin-left: 16px;
>> >>>      margin-top: 12px;
>> >>>      margin-bottom: 6px;
>> >>>      font-weight: bold;
>> >>> }
>> >>> DIV.groupText { margin-left: 16px; font-style: italic; font-size: 90%
>> >>> }
>> >>> BODY {
>> >>>       background: white;
>> >>>       color: black;
>> >>>       margin-right: 20px;
>> >>>       margin-left: 20px;
>> >>> }
>> >>> TD.indexkey {
>> >>>       background-color: #e8eef2;
>> >>>       font-weight: bold;
>> >>>       padding-right  : 10px;
>> >>>       padding-top    : 2px;
>> >>>       padding-left   : 10px;
>> >>>       padding-bottom : 2px;
>> >>>       margin-left    : 0px;
>> >>>       margin-right   : 0px;
>> >>>       margin-top     : 2px;
>> >>>       margin-bottom  : 2px;
>> >>>       border: 1px solid #CCCCCC;
>> >>> }
>> >>> TD.indexvalue {
>> >>>       background-color: #e8eef2;
>> >>>       font-style: italic;
>> >>>       padding-right  : 10px;
>> >>>       padding-top    : 2px;
>> >>>       padding-left   : 10px;
>> >>>       padding-bottom : 2px;
>> >>>       margin-left    : 0px;
>> >>>       margin-right   : 0px;
>> >>>       margin-top     : 2px;
>> >>>       margin-bottom  : 2px;
>> >>>       border: 1px solid #CCCCCC;
>> >>> }
>> >>> TR.memlist {
>> >>>  background-color: #f0f0f0;
>> >>> }
>> >>> P.formulaDsp { text-align: center; }
>> >>> IMG.formulaDsp { }
>> >>> IMG.formulaInl { vertical-align: middle; }
>> >>> SPAN.keyword       { color: #008000 }
>> >>> SPAN.keywordtype   { color: #604020 }
>> >>> SPAN.keywordflow   { color: #e08000 }
>> >>> SPAN.comment       { color: #800000 }
>> >>> SPAN.preprocessor  { color: #806020 }
>> >>> SPAN.stringliteral { color: #002080 }
>> >>> SPAN.charliteral   { color: #008080 }
>> >>> .mdescLeft {
>> >>>      padding: 0px 8px 4px 8px;
>> >>>       font-size: 80%;
>> >>>       font-style: italic;
>> >>>       background-color: #FAFAFA;
>> >>>       border-top: 1px none #E0E0E0;
>> >>>       border-right: 1px none #E0E0E0;
>> >>>       border-bottom: 1px none #E0E0E0;
>> >>>       border-left: 1px none #E0E0E0;
>> >>>       margin: 0px;
>> >>> }
>> >>> .mdescRight {
>> >>>      padding: 0px 8px 4px 8px;
>> >>>       font-size: 80%;
>> >>>       font-style: italic;
>> >>>       background-color: #FAFAFA;
>> >>>       border-top: 1px none #E0E0E0;
>> >>>       border-right: 1px none #E0E0E0;
>> >>>       border-bottom: 1px none #E0E0E0;
>> >>>       border-left: 1px none #E0E0E0;
>> >>>       margin: 0px;
>> >>> }
>> >>> .memItemLeft {
>> >>>       padding: 1px 0px 0px 8px;
>> >>>       margin: 4px;
>> >>>       border-top-width: 1px;
>> >>>       border-right-width: 1px;
>> >>>       border-bottom-width: 1px;
>> >>>       border-left-width: 1px;
>> >>>       border-top-color: #E0E0E0;
>> >>>       border-right-color: #E0E0E0;
>> >>>       border-bottom-color: #E0E0E0;
>> >>>       border-left-color: #E0E0E0;
>> >>>       border-top-style: solid;
>> >>>       border-right-style: none;
>> >>>       border-bottom-style: none;
>> >>>       border-left-style: none;
>> >>>       background-color: #FAFAFA;
>> >>>       font-size: 80%;
>> >>> }
>> >>> .memItemRight {
>> >>>       padding: 1px 8px 0px 8px;
>> >>>       margin: 4px;
>> >>>       border-top-width: 1px;
>> >>>       border-right-width: 1px;
>> >>>       border-bottom-width: 1px;
>> >>>       border-left-width: 1px;
>> >>>       border-top-color: #E0E0E0;
>> >>>       border-right-color: #E0E0E0;
>> >>>       border-bottom-color: #E0E0E0;
>> >>>       border-left-color: #E0E0E0;
>> >>>       border-top-style: solid;
>> >>>       border-right-style: none;
>> >>>       border-bottom-style: none;
>> >>>       border-left-style: none;
>> >>>       background-color: #FAFAFA;
>> >>>       font-size: 80%;
>> >>> }
>> >>> .memTemplItemLeft {
>> >>>       padding: 1px 0px 0px 8px;
>> >>>       margin: 4px;
>> >>>       border-top-width: 1px;
>> >>>       border-right-width: 1px;
>> >>>       border-bottom-width: 1px;
>> >>>       border-left-width: 1px;
>> >>>       border-top-color: #E0E0E0;
>> >>>       border-right-color: #E0E0E0;
>> >>>       border-bottom-color: #E0E0E0;
>> >>>       border-left-color: #E0E0E0;
>> >>>       border-top-style: none;
>> >>>       border-right-style: none;
>> >>>       border-bottom-style: none;
>> >>>       border-left-style: none;
>> >>>       background-color: #FAFAFA;
>> >>>       font-size: 80%;
>> >>> }
>> >>> .memTemplItemRight {
>> >>>       padding: 1px 8px 0px 8px;
>> >>>       margin: 4px;
>> >>>       border-top-width: 1px;
>> >>>       border-right-width: 1px;
>> >>>       border-bottom-width: 1px;
>> >>>       border-left-width: 1px;
>> >>>       border-top-color: #E0E0E0;
>> >>>       border-right-color: #E0E0E0;
>> >>>       border-bottom-color: #E0E0E0;
>> >>>       border-left-color: #E0E0E0;
>> >>>       border-top-style: none;
>> >>>       border-right-style: none;
>> >>>       border-bottom-style: none;
>> >>>       border-left-style: none;
>> >>>       background-color: #FAFAFA;
>> >>>       font-size: 80%;
>> >>> }
>> >>> .memTemplParams {
>> >>>       padding: 1px 0px 0px 8px;
>> >>>       margin: 4px;
>> >>>       border-top-width: 1px;
>> >>>       border-right-width: 1px;
>> >>>       border-bottom-width: 1px;
>> >>>       border-left-width: 1px;
>> >>>       border-top-color: #E0E0E0;
>> >>>       border-right-color: #E0E0E0;
>> >>>       border-bottom-color: #E0E0E0;
>> >>>       border-left-color: #E0E0E0;
>> >>>       border-top-style: solid;
>> >>>       border-right-style: none;
>> >>>       border-bottom-style: none;
>> >>>       border-left-style: none;
>> >>>      color: #606060;
>> >>>       background-color: #FAFAFA;
>> >>>       font-size: 80%;
>> >>> }
>> >>> .search     { color: #003399;
>> >>>             font-weight: bold;
>> >>> }
>> >>> FORM.search {
>> >>>             margin-bottom: 0px;
>> >>>             margin-top: 0px;
>> >>> }
>> >>> INPUT.search { font-size: 75%;
>> >>>              color: #000080;
>> >>>              font-weight: normal;
>> >>>              background-color: #e8eef2;
>> >>> }
>> >>> TD.tiny      { font-size: 75%;
>> >>> }
>> >>> a {
>> >>>       color: #1A41A8;
>> >>> }
>> >>> a:visited {
>> >>>       color: #2A3798;
>> >>> }
>> >>> .dirtab { padding: 4px;
>> >>>         border-collapse: collapse;
>> >>>         border: 1px solid #84b0c7;
>> >>> }
>> >>> TH.dirtab { background: #e8eef2;
>> >>>           font-weight: bold;
>> >>> }
>> >>> HR { height: 1px;
>> >>>    border: none;
>> >>>    border-top: 1px solid black;
>> >>> }
>> >>>
>> >>> /* Style for detailed member documentation */
>> >>> .memtemplate {
>> >>>  font-size: 80%;
>> >>>  color: #606060;
>> >>>  font-weight: normal;
>> >>> }
>> >>> .memnav {
>> >>>  background-color: #e8eef2;
>> >>>  border: 1px solid #84b0c7;
>> >>>  text-align: center;
>> >>>  margin: 2px;
>> >>>  margin-right: 15px;
>> >>>  padding: 2px;
>> >>> }
>> >>> .memitem {
>> >>>  padding: 4px;
>> >>>  background-color: #eef3f5;
>> >>>  border-width: 1px;
>> >>>  border-style: solid;
>> >>>  border-color: #dedeee;
>> >>>  -moz-border-radius: 8px 8px 8px 8px;
>> >>> }
>> >>> .memname {
>> >>>  white-space: nowrap;
>> >>>  font-weight: bold;
>> >>> }
>> >>> .memdoc{
>> >>>  padding-left: 10px;
>> >>> }
>> >>> .memproto {
>> >>>  background-color: #d5e1e8;
>> >>>  width: 100%;
>> >>>  border-width: 1px;
>> >>>  border-style: solid;
>> >>>  border-color: #84b0c7;
>> >>>  font-weight: bold;
>> >>>  -moz-border-radius: 8px 8px 8px 8px;
>> >>> }
>> >>> .paramkey {
>> >>>  text-align: right;
>> >>> }
>> >>> .paramtype {
>> >>>  white-space: nowrap;
>> >>> }
>> >>> .paramname {
>> >>>  color: #602020;
>> >>>  font-style: italic;
>> >>>  white-space: nowrap;
>> >>> }
>> >>> /* End Styling for detailed member documentation */
>> >>>
>> >>> /* for the tree view */
>> >>> .ftvtree {
>> >>>       font-family: sans-serif;
>> >>>       margin:0.5em;
>> >>> }
>> >>> .directory { font-size: 9pt; font-weight: bold; }
>> >>> .directory h3 { margin: 0px; margin-top: 1em; font-size: 11pt; }
>> >>> .directory > h3 { margin-top: 0; }
>> >>> .directory p { margin: 0px; white-space: nowrap; }
>> >>> .directory div { display: none; margin: 0px; }
>> >>> .directory img { vertical-align: -30%; }
>> >>>
>> >>>
>> >>> _____________________________________
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>> >>>
>> >>> Visit other Kitware open-source projects at
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>> >>> http://www.itk.org/Wiki/ITK_FAQ
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>> >>>
>> >>
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>> >>
>> >> Visit other Kitware open-source projects at
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>> >>
>> >> Please keep messages on-topic and check the ITK FAQ at:
>> >> http://www.itk.org/Wiki/ITK_FAQ
>> >>
>> >> Follow this link to subscribe/unsubscribe:
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>> >
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>> >
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>> >
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>> >
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