[Insight-users] Image Pointer was passed to the template functin, disirable change happended in the template function, image informatin was lost in the main function

[Andreas Schuh]

I guess the problem you are talking about is that you want to pass the  
resampled image as out parameter InternalFilter of your  
IsotropicResample function, isn't it? But you're actually not doing  
what you want to. Use TInternalFilter::Pointer& as type for your out  
parameter InternalFilter and you will be able to use the result of the  
resampling after calling IsotropicResample in your main function.

--
regards
Andreas

Am 02.03.2009 um 17:48 schrieb Andreas Schuh <andreas.schuh.84 at googlemail.com 
 >:

> Hi Baoyun,
>
> your code is somehow confusing.
>
> Why do you instanciate inputimage in your main function at all? This  
> isn't necessary as you later set the pointer to the image object  
> create by the ImageFileReader filter.
>
> Why do you instanciate an output image object in the main function  
> and pass it to your IsotropicResample() template function where the  
> parameter InternalFilter is set to the output of the ResampleFilter  
> instance?
>
> Moreover, there is the part missing where you compute the size that  
> you set as OutputSize of the resample filter.
>
> BTW To make your code more readable, you shouldn't name image types  
> or image parameters using the postfix 'Filter'. Moreover, names of  
> parameters or variables should start with a lower case letter for  
> convenience. Upper case identifiers usually name types or functions/ 
> methods.
>
> --
> regards
> Andreas
>
> Am 02.03.2009 um 17:09 schrieb Baoyun Li <baoyun_li123 at yahoo.com>:
>
>>
>> Dear All:
>>
>> I am trying to do some resampling of image throuth template  
>> function. Below is example of my main program.
>>
>> In the main program, I read an image and give inputimage=reader- 
>> >GetOutput().
>> I decalare another image pointer,OutputImageType::Pointer  
>> image_high=OutputImageType::New();
>> both image pass to the tempalte functin as below
>>
>>  IsotropicResample <3,InputImageType,OutputImageType,double>  
>> (inputimage,image_high,scale);
>>
>> { my template fucntion delcared as:
>>
>>  template <unsigned int Dim,class TInputFilter, class  
>> TInternalFilter, class TScale>
>> void IsotropicResample( TInputFilter* InputFilter, TInternalFilter*  
>> InternalFilter, TScale scale)
>>
>> }
>>
>> In the template function, I got the reampled image as following :
>>
>>  resampler->Update();
>>    InternalFilter=resampler->GetOutput();
>>    writer->SetFileName("../data/out_test.hdr");
>>    writer->SetInput(InternalFilter);
>>        try
>>        {
>>       writer->Update();
>>        }
>>      catch( itk::ExceptionObject & excep )
>>       {
>>        std::cerr << "Exception caught !" << std::endl;
>>        std::cerr << excep << std::endl;
>>        }
>>
>> I checked the result, the resampled image by the above writer is  
>> correct.
>>
>> but I got empty image when I tried to write image_high defined in  
>> the main function.
>>
>> Can somebody tell me what will be the probolem
>>
>> Baoyun
>> ////code in the main program
>>
>>   reader->SetFileName(argv[1]);
>>   InputImageType::Pointer inputimage=InputImageType::New();
>>   OutputImageType::Pointer image_high=OutputImageType::New();
>>
>>    InputImageType::Pointer inputimage=InputImageType::New();
>>   OutputImageType::Pointer image_high=OutputImageType::New();
>>
>>   try
>>     {
>>     reader->Update();
>>     }
>>   catch( itk::ExceptionObject & excep )
>>     {
>>     std::cerr << "Exception caught!" << std::endl;
>>     std::cerr << excep << std::endl;
>>     }
>> inputimage=reader->GetOutput();
>>
>>  IsotropicResample <3,InputImageType,OutputImageType,double>  
>> (inputimage,image_high,scale);
>>
>> ////template function
>>
>> #ifndef _IsotropicResample_H_
>> #define _IsotropicResample_H_
>>
>> #if defined(_MSC_VER)
>> #pragma warning ( disable : 4786 )
>> #endif
>> #ifdef __BORLANDC__
>> #define ITK_LEAN_AND_MEAN
>> #endif
>>
>> #include "itkImage.h"
>> #include "itkImageFileReader.h"
>> #include "itkImageFileWriter.h"
>> // Software Guide : BeginCodeSnippet
>> #include "itkResampleImageFilter.h"
>> #include "itkRecursiveGaussianImageFilter.h"
>> // Software Guide : EndCodeSnippet
>>
>>
>>
>> // Software Guide : BeginCodeSnippet
>> #include "itkIdentityTransform.h"
>> #include "itkLinearInterpolateImageFunction.h"
>> #include "itkAffineTransform.h"
>> // Software Guide : EndCodeSnippet
>> // Software Guide : BeginCodeSnippet
>> #include "itkIntensityWindowingImageFilter.h"
>> #include "itkCastImageFilter.h"
>> #include <itkWindowedSincInterpolateImageFunction.h>
>> #include "itkBSplineInterpolateImageFunction.h"
>>
>> // Software Guide : EndCodeSnippet
>>
>>
>> //template <class TInputFilter, class TInternalFilter, class TScale>
>> //void IsotropicResample( TInputFilter* InputFilter,  
>> TInternalFilter* InternalFilter, TScale scale);
>>
>> template <unsigned int Dim,class TInputFilter, class  
>> TInternalFilter, class TScale>
>> void IsotropicResample( TInputFilter* InputFilter, TInternalFilter*  
>> InternalFilter, TScale scale)
>> {
>>
>>   typedef  TInputFilter InputImageType;
>>   typedef TInternalFilter OutputImageType;
>>   typedef   float           InternalPixelType;
>>   typedef itk::Image< InternalPixelType, Dim >   InternalImageType;
>>
>>   typename InputImageType::ConstPointer inputImage = InputFilter;
>>   typename InputImageType::SpacingType inputSpacing= inputImage- 
>> >GetSpacing();
>> ///// do reampling
>>
>>    resampler->SetSize( size );
>>    resampler->Update();
>>    InternalFilter=resampler->GetOutput();
>>    writer->SetFileName("../data/out_test.hdr");
>>    writer->SetInput(InternalFilter);
>>        try
>>        {
>>       writer->Update();
>>        }
>>      catch( itk::ExceptionObject & excep )
>>       {
>>        std::cerr << "Exception caught !" << std::endl;
>>        std::cerr << excep << std::endl;
>>        }
>>
>> //
>>
>> };
>>
>> #endif
>>
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