[Insight-users] 3D image data

[Ghassan Hamarneh]

On 17-Mar-09, at 12:47 PM, Wen Shi wrote:

> Hi Guys,
>
> I really got confused about the 3D image data.
> I used imageSeriesReader read a collection of 2D slices of images  
> and output a 3D image, the code is the same as in the example / 
> ImageSeriesReadWrite.cxx
> Then I got the output image which is for sure a 3D image.


In what format?  How did you confirm that it is 3D and it looks OK  
(e.g. which 3D viewer did you use)?


> Then I used ImageSeriesWriter tried to write it back into slices.  
> The code is the same in /iamgeReadImageSeriesWrite.cxx


If you want to write an image series, then, from the name of the file:  
"iamgeReadImageSeriesWrite.cxx", it  doesn't seem to have the correct  
content (read instead of write)...  But I may be wrong.


> But then when I debug the 3D


How do you debug a 3D image, what is the file format you are exporting  
(extension(s) of the file), e.g. mhd/img?

/g


> image is actually not recognized as 3D since the size of the image  
> during debugging is something as 827X193X1.
> How to generate a real 3D image?
> Why the output of SeriesReader is not recognized as a 3D image?
>
> Thanks a lot
>
> Wen Shi
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