[Insight-users] Automatic Junction Detection IJ 324, compile errors

[Luis Ibanez]

Hi Zhihong,

I just finished reviewing this paper.
http://www.insight-journal.org/browse/publication/324

The 2D example worked fine for me.

It takes some time to run, so you may have to be patient.

In my laptop it took 537 seconds.

This is an Intel dual core T9600 at 2.8Ghz.

The output 2D image was identical to the output image
provided in the paper.

Make sure that you compile the code for "Release"
and allow it to run for at least 15min.


(This is a very nice paper, so it seems to be worth
  spending some time on getting it to work in your
  platform).



Please let us know if you still find any problems,


     Thanks


        Luis


--------------------
zhihong hu wrote:
> Hi, Luis and All
>  
> I built the JunctionDectection project under windows. It seems all 
> right. But when I tried to run: itkJunctionDetectionFilter2DTest.exe, it 
> did not work.
> The command line was:
>  itkJunctionDetectionFilter2DTest.exe Neuroninput.mha out2D.mha 2.0 3.3
>  
> Did anybody make it work?
>  
> Thank you very much.
>  
> Zhihong Hu from the University of Iowa
>  
> 
> 
>  
> On Tue, Mar 24, 2009 at 3:08 PM, Oleksandr Dzyubak <adzyubak at gmail.com 
> <mailto:adzyubak at gmail.com>> wrote:
> 
> 
>     Dear ITKers,
> 
>     I just downloaded Automatic Junction Detection (IJ Paper Id: 324)
>     and tried to compile it on Linux Debian with gcc version 4.3.2
>     (Debian 4.3.2-1.1).
> 
>     Besides "itkJunctionDetectionFilter.h:4:35: error:
>     itkImagetoImageFilter.h: No such file or directory"
>     which easy to correct, I got multiple errors like below.
> 
>     ************** Errors begin ****
> 
>     itkJunctionDetectionFilter.txx: In member function ‘void
>     itk::JunctionDetectionFilter<TInputImage>::GenerateData()’:
>     /mnt/Public/Programs/ITK_Test/Skeletons/Automatic_Junction_Detection/Src/itkJunctionDetectionFilter.txx:69:
>     error: type/value mismatch at argument 1 in template parameter list
>     for ‘template<class T, unsigned int NVectorDimension> class itk::Vector’
>     /mnt/Public/Programs/ITK_Test/Skeletons/Automatic_Junction_Detection/Src/itkJunctionDetectionFilter.txx:69:
>     error: expected a type, got ‘TInputImage::IndexType::IndexValueType’
>     /mnt/Public/Programs/ITK_Test/Skeletons/Automatic_Junction_Detection/Src/itkJunctionDetectionFilter.txx:69:
>     error: invalid type in declaration before ‘;’ token
> 
>     .........
>     etc.
>     ............
> 
>     make[2]: ***
>     [CMakeFiles/itkJunctionDetectionFilter2DTest.dir/itkJunctionDetectionFilter2DTest.o]
>     Error 1
>     make[1]: *** [CMakeFiles/itkJunctionDetectionFilter2DTest.dir/all]
>     Error 2
>     make: *** [all] Error 2
> 
>     ************** Errors end ****
> 
>     Any ideas how to fix that?
> 
>     Thanks,
>     Alex
> 
>     _____________________________________
>     Powered by www.kitware.com <http://www.kitware.com/>
> 
>     Visit other Kitware open-source projects at
>     http://www.kitware.com/opensource/opensource.html
> 
>     Please keep messages on-topic and check the ITK FAQ at:
>     http://www.itk.org/Wiki/ITK_FAQ
> 
>     Follow this link to subscribe/unsubscribe:
>     http://www.itk.org/mailman/listinfo/insight-users
> 
> 
> 
> ------------------------------------------------------------------------
> 
> _____________________________________
> Powered by www.kitware.com
> 
> Visit other Kitware open-source projects at
> http://www.kitware.com/opensource/opensource.html
> 
> Please keep messages on-topic and check the ITK FAQ at: http://www.itk.org/Wiki/ITK_FAQ
> 
> Follow this link to subscribe/unsubscribe:
> http://www.itk.org/mailman/listinfo/insight-users